Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc28m07
(529 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY396742-1|AAR91620.1| 784|Homo sapiens repetin protein. 34 0.27
AY219924-1|AAP48705.1| 784|Homo sapiens repetin protein. 34 0.27
BC000450-1|AAH00450.1| 680|Homo sapiens glyceronephosphate O-ac... 33 0.62
AL137801-6|CAI21988.1| 680|Homo sapiens glyceronephosphate O-ac... 33 0.62
AL137801-5|CAI21987.1| 587|Homo sapiens glyceronephosphate O-ac... 33 0.62
AL117352-3|CAI23094.1| 680|Homo sapiens glyceronephosphate O-ac... 33 0.62
AL117352-2|CAI23093.1| 587|Homo sapiens glyceronephosphate O-ac... 33 0.62
AK223304-1|BAD97024.1| 680|Homo sapiens glyceronephosphate O-ac... 33 0.62
AK222773-1|BAD96493.1| 680|Homo sapiens glyceronephosphate O-ac... 33 0.62
AJ002190-1|CAA05242.1| 680|Homo sapiens dihydroxyacetone phosph... 33 0.62
AF218233-1|AAG17547.1| 680|Homo sapiens dihydroxyacetonephospha... 33 0.62
AF043937-1|AAC24505.1| 680|Homo sapiens peroxisomal acyl-CoA:di... 33 0.62
AB209882-1|BAD93119.1| 693|Homo sapiens glyceronephosphate O-ac... 33 0.62
AB065449-1|BAC05712.1| 335|Homo sapiens seven transmembrane hel... 33 0.82
AY295769-1|AAP49447.1| 1349|Homo sapiens hypothetical protein FL... 31 3.3
AL442071-4|CAH73671.1| 5938|Homo sapiens microtubule-actin cross... 31 3.3
AL365277-12|CAI16422.1| 5938|Homo sapiens microtubule-actin cros... 31 3.3
AL137853-3|CAI21816.1| 5938|Homo sapiens microtubule-actin cross... 31 3.3
AK056672-1|BAB71248.1| 600|Homo sapiens protein ( Homo sapiens ... 31 3.3
AF325341-2|AAL38997.1| 5314|Homo sapiens macrophin 1 isoform 4 p... 31 3.3
AF317696-1|AAL09459.1| 5938|Homo sapiens macrophin 1 isoform 4 p... 31 3.3
X67482-1|CAA47824.1| 427|Homo sapiens HL-60 1,25-dihydroxyvitam... 30 5.8
J03258-1|AAA61273.1| 427|Homo sapiens VDR protein. 30 5.8
BC060832-1|AAH60832.1| 427|Homo sapiens VDR protein protein. 30 5.8
AY342401-1|AAP88938.1| 424|Homo sapiens vitamin D (1,25-dihydro... 30 5.8
AF026260-1|AAB95155.1| 427|Homo sapiens vitamin D receptor prot... 30 5.8
AB002168-1|BAA83389.1| 427|Homo sapiens vitamin D receptor prot... 30 5.8
>AY396742-1|AAR91620.1| 784|Homo sapiens repetin protein.
Length = 784
Score = 34.3 bits (75), Expect = 0.27
Identities = 17/69 (24%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = +3
Query: 51 AFERTRRQT*HAAVGRKIENRHRNGKQKWHGDVSA-RHYQTPAFGHIFGTHRRPHQTRFC 227
+F+++ RQ+ ++ G+K+ ++ +G+ KW G + A + P +G R Q
Sbjct: 193 SFDQSERQSQDSSSGKKVSHKSTSGQAKWQGHIFALNRCEKPIQDSHYGQSERHTQQSET 252
Query: 228 FGPRATFSQ 254
G + F+Q
Sbjct: 253 LGQASHFNQ 261
>AY219924-1|AAP48705.1| 784|Homo sapiens repetin protein.
Length = 784
Score = 34.3 bits (75), Expect = 0.27
Identities = 17/69 (24%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = +3
Query: 51 AFERTRRQT*HAAVGRKIENRHRNGKQKWHGDVSA-RHYQTPAFGHIFGTHRRPHQTRFC 227
+F+++ RQ+ ++ G+K+ ++ +G+ KW G + A + P +G R Q
Sbjct: 193 SFDQSERQSQDSSSGKKVSHKSTSGQAKWQGHIFALNRCEKPIQDSHYGQSERHTQQSET 252
Query: 228 FGPRATFSQ 254
G + F+Q
Sbjct: 253 LGQASHFNQ 261
>BC000450-1|AAH00450.1| 680|Homo sapiens glyceronephosphate
O-acyltransferase protein.
Length = 680
Score = 33.1 bits (72), Expect = 0.62
Identities = 19/87 (21%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Frame = +1
Query: 184 IFSERIDDRIKLAFVLGQERHFRKRKMRFEDDMEVLYDGVHPNPLLAIQCINEKLYDKHY 363
++S+ + + +L + RH K + ++Y G+ P + I+C + HY
Sbjct: 24 LYSKELKKWDEFEDILEERRHVSDLKFAMKCYTPLVYKGITPCKPIDIKCSVLNSEEIHY 83
Query: 364 KIRKIAKRVI-DVDCTHNVVKEVIQEV 441
I++++K + VD V E++ E+
Sbjct: 84 VIKQLSKESLQSVDVLREEVSEILDEM 110
>AL137801-6|CAI21988.1| 680|Homo sapiens glyceronephosphate
O-acyltransferase protein.
Length = 680
Score = 33.1 bits (72), Expect = 0.62
Identities = 19/87 (21%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Frame = +1
Query: 184 IFSERIDDRIKLAFVLGQERHFRKRKMRFEDDMEVLYDGVHPNPLLAIQCINEKLYDKHY 363
++S+ + + +L + RH K + ++Y G+ P + I+C + HY
Sbjct: 24 LYSKELKKWDEFEDILEERRHVSDLKFAMKCYTPLVYKGITPCKPIDIKCSVLNSEEIHY 83
Query: 364 KIRKIAKRVI-DVDCTHNVVKEVIQEV 441
I++++K + VD V E++ E+
Sbjct: 84 VIKQLSKESLQSVDVLREEVSEILDEM 110
>AL137801-5|CAI21987.1| 587|Homo sapiens glyceronephosphate
O-acyltransferase protein.
Length = 587
Score = 33.1 bits (72), Expect = 0.62
Identities = 19/87 (21%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Frame = +1
Query: 184 IFSERIDDRIKLAFVLGQERHFRKRKMRFEDDMEVLYDGVHPNPLLAIQCINEKLYDKHY 363
++S+ + + +L + RH K + ++Y G+ P + I+C + HY
Sbjct: 24 LYSKELKKWDEFEDILEERRHVSDLKFAMKCYTPLVYKGITPCKPIDIKCSVLNSEEIHY 83
Query: 364 KIRKIAKRVI-DVDCTHNVVKEVIQEV 441
I++++K + VD V E++ E+
Sbjct: 84 VIKQLSKESLQSVDVLREEVSEILDEM 110
>AL117352-3|CAI23094.1| 680|Homo sapiens glyceronephosphate
O-acyltransferase protein.
Length = 680
Score = 33.1 bits (72), Expect = 0.62
Identities = 19/87 (21%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Frame = +1
Query: 184 IFSERIDDRIKLAFVLGQERHFRKRKMRFEDDMEVLYDGVHPNPLLAIQCINEKLYDKHY 363
++S+ + + +L + RH K + ++Y G+ P + I+C + HY
Sbjct: 24 LYSKELKKWDEFEDILEERRHVSDLKFAMKCYTPLVYKGITPCKPIDIKCSVLNSEEIHY 83
Query: 364 KIRKIAKRVI-DVDCTHNVVKEVIQEV 441
I++++K + VD V E++ E+
Sbjct: 84 VIKQLSKESLQSVDVLREEVSEILDEM 110
>AL117352-2|CAI23093.1| 587|Homo sapiens glyceronephosphate
O-acyltransferase protein.
Length = 587
Score = 33.1 bits (72), Expect = 0.62
Identities = 19/87 (21%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Frame = +1
Query: 184 IFSERIDDRIKLAFVLGQERHFRKRKMRFEDDMEVLYDGVHPNPLLAIQCINEKLYDKHY 363
++S+ + + +L + RH K + ++Y G+ P + I+C + HY
Sbjct: 24 LYSKELKKWDEFEDILEERRHVSDLKFAMKCYTPLVYKGITPCKPIDIKCSVLNSEEIHY 83
Query: 364 KIRKIAKRVI-DVDCTHNVVKEVIQEV 441
I++++K + VD V E++ E+
Sbjct: 84 VIKQLSKESLQSVDVLREEVSEILDEM 110
>AK223304-1|BAD97024.1| 680|Homo sapiens glyceronephosphate
O-acyltransferase variant protein.
Length = 680
Score = 33.1 bits (72), Expect = 0.62
Identities = 19/87 (21%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Frame = +1
Query: 184 IFSERIDDRIKLAFVLGQERHFRKRKMRFEDDMEVLYDGVHPNPLLAIQCINEKLYDKHY 363
++S+ + + +L + RH K + ++Y G+ P + I+C + HY
Sbjct: 24 LYSKELKKWDEFEDILEERRHVSDLKFAMKCYTPLVYKGITPCKPIDIKCSVLNSEEIHY 83
Query: 364 KIRKIAKRVI-DVDCTHNVVKEVIQEV 441
I++++K + VD V E++ E+
Sbjct: 84 VIKQLSKESLQSVDVLREEVSEILDEM 110
>AK222773-1|BAD96493.1| 680|Homo sapiens glyceronephosphate
O-acyltransferase variant protein.
Length = 680
Score = 33.1 bits (72), Expect = 0.62
Identities = 19/87 (21%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Frame = +1
Query: 184 IFSERIDDRIKLAFVLGQERHFRKRKMRFEDDMEVLYDGVHPNPLLAIQCINEKLYDKHY 363
++S+ + + +L + RH K + ++Y G+ P + I+C + HY
Sbjct: 24 LYSKELKKWDEFEDILEERRHVSDLKFAMKCYTPLVYKGITPCKPIDIKCSVLNSEEIHY 83
Query: 364 KIRKIAKRVI-DVDCTHNVVKEVIQEV 441
I++++K + VD V E++ E+
Sbjct: 84 VIKQLSKESLQSVDVLREEVSEILDEM 110
>AJ002190-1|CAA05242.1| 680|Homo sapiens dihydroxyacetone phosphate
acyltransferase protein.
Length = 680
Score = 33.1 bits (72), Expect = 0.62
Identities = 19/87 (21%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Frame = +1
Query: 184 IFSERIDDRIKLAFVLGQERHFRKRKMRFEDDMEVLYDGVHPNPLLAIQCINEKLYDKHY 363
++S+ + + +L + RH K + ++Y G+ P + I+C + HY
Sbjct: 24 LYSKELKKWDEFEDILEERRHVSDLKFAMKCYTPLVYKGITPCKPIDIKCSVLNSEEIHY 83
Query: 364 KIRKIAKRVI-DVDCTHNVVKEVIQEV 441
I++++K + VD V E++ E+
Sbjct: 84 VIKQLSKESLQSVDVLREEVSEILDEM 110
>AF218233-1|AAG17547.1| 680|Homo sapiens dihydroxyacetonephosphate
acyltransferase protein.
Length = 680
Score = 33.1 bits (72), Expect = 0.62
Identities = 19/87 (21%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Frame = +1
Query: 184 IFSERIDDRIKLAFVLGQERHFRKRKMRFEDDMEVLYDGVHPNPLLAIQCINEKLYDKHY 363
++S+ + + +L + RH K + ++Y G+ P + I+C + HY
Sbjct: 24 LYSKELKKWDEFEDILEERRHVSDLKFAMKCYTPLVYKGITPCKPIDIKCSVLNSEEIHY 83
Query: 364 KIRKIAKRVI-DVDCTHNVVKEVIQEV 441
I++++K + VD V E++ E+
Sbjct: 84 VIKQLSKESLQSVDVLREEVSEILDEM 110
>AF043937-1|AAC24505.1| 680|Homo sapiens peroxisomal
acyl-CoA:dihydroxyacetonephosphate acyltransferase
protein.
Length = 680
Score = 33.1 bits (72), Expect = 0.62
Identities = 19/87 (21%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Frame = +1
Query: 184 IFSERIDDRIKLAFVLGQERHFRKRKMRFEDDMEVLYDGVHPNPLLAIQCINEKLYDKHY 363
++S+ + + +L + RH K + ++Y G+ P + I+C + HY
Sbjct: 24 LYSKELKKWDEFEDILEERRHVSDLKFAMKCYTPLVYKGITPCKPIDIKCSVLNSEEIHY 83
Query: 364 KIRKIAKRVI-DVDCTHNVVKEVIQEV 441
I++++K + VD V E++ E+
Sbjct: 84 VIKQLSKESLQSVDVLREEVSEILDEM 110
>AB209882-1|BAD93119.1| 693|Homo sapiens glyceronephosphate
O-acyltransferase variant protein.
Length = 693
Score = 33.1 bits (72), Expect = 0.62
Identities = 19/87 (21%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Frame = +1
Query: 184 IFSERIDDRIKLAFVLGQERHFRKRKMRFEDDMEVLYDGVHPNPLLAIQCINEKLYDKHY 363
++S+ + + +L + RH K + ++Y G+ P + I+C + HY
Sbjct: 37 LYSKELKKWDEFEDILEERRHVSDLKFAMKCYTPLVYKGITPCKPIDIKCSVLNSEEIHY 96
Query: 364 KIRKIAKRVI-DVDCTHNVVKEVIQEV 441
I++++K + VD V E++ E+
Sbjct: 97 VIKQLSKESLQSVDVLREEVSEILDEM 123
>AB065449-1|BAC05712.1| 335|Homo sapiens seven transmembrane helix
receptor protein.
Length = 335
Score = 32.7 bits (71), Expect = 0.82
Identities = 24/106 (22%), Positives = 45/106 (42%)
Frame = -2
Query: 480 YILITIIHVFILQYFLYNLFNYIMSTIHVDYTFSYFSNFVMFIVEFFVNTLNCQQGIWVH 301
++L I +L Y+ F I +H + + +V FF++ L+ Q W+
Sbjct: 106 FVLFACIEDMLLTVMAYDRFVAICHPLHYPVIMNPHLGVFLVLVSFFLSLLDSQLHSWIV 165
Query: 300 TVIEHFHVVFKAHFSLAKMSLLAQNKSEFDAVVDAFRKYGQMLVFG 163
F V ++F LL N + D+V+++ Y ++FG
Sbjct: 166 LQFTFFKNVEISNFVCDPSQLL--NLACSDSVINSIFIYLDSIMFG 209
>AY295769-1|AAP49447.1| 1349|Homo sapiens hypothetical protein
FLJ32110 protein.
Length = 1349
Score = 30.7 bits (66), Expect = 3.3
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +1
Query: 301 VHPNPLLAIQCINEKLYDKHYKIRKIAKRVIDVDCTHNVVKE 426
VH NP I+ EK DK ++ K +R++ CTHNV +
Sbjct: 399 VHLNPNSRIEN-REKSLDKTERVSKNVQRLVKEACTHNVASK 439
>AL442071-4|CAH73671.1| 5938|Homo sapiens microtubule-actin
crosslinking factor 1 protein.
Length = 5938
Score = 30.7 bits (66), Expect = 3.3
Identities = 15/60 (25%), Positives = 30/60 (50%)
Frame = +1
Query: 238 ERHFRKRKMRFEDDMEVLYDGVHPNPLLAIQCINEKLYDKHYKIRKIAKRVIDVDCTHNV 417
E+ R+R + + + L D PL +Q I+ L ++ +R + K+V+D H++
Sbjct: 892 EKTVRERLISLQMETTGLIDPDSKAPLTVVQSIDRGLLEREEAVRLLTKQVVDGGIIHHI 951
>AL365277-12|CAI16422.1| 5938|Homo sapiens microtubule-actin
crosslinking factor 1 protein.
Length = 5938
Score = 30.7 bits (66), Expect = 3.3
Identities = 15/60 (25%), Positives = 30/60 (50%)
Frame = +1
Query: 238 ERHFRKRKMRFEDDMEVLYDGVHPNPLLAIQCINEKLYDKHYKIRKIAKRVIDVDCTHNV 417
E+ R+R + + + L D PL +Q I+ L ++ +R + K+V+D H++
Sbjct: 892 EKTVRERLISLQMETTGLIDPDSKAPLTVVQSIDRGLLEREEAVRLLTKQVVDGGIIHHI 951
>AL137853-3|CAI21816.1| 5938|Homo sapiens microtubule-actin
crosslinking factor 1 protein.
Length = 5938
Score = 30.7 bits (66), Expect = 3.3
Identities = 15/60 (25%), Positives = 30/60 (50%)
Frame = +1
Query: 238 ERHFRKRKMRFEDDMEVLYDGVHPNPLLAIQCINEKLYDKHYKIRKIAKRVIDVDCTHNV 417
E+ R+R + + + L D PL +Q I+ L ++ +R + K+V+D H++
Sbjct: 892 EKTVRERLISLQMETTGLIDPDSKAPLTVVQSIDRGLLEREEAVRLLTKQVVDGGIIHHI 951
>AK056672-1|BAB71248.1| 600|Homo sapiens protein ( Homo sapiens
cDNA FLJ32110 fis, clone OCBBF2001527. ).
Length = 600
Score = 30.7 bits (66), Expect = 3.3
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +1
Query: 301 VHPNPLLAIQCINEKLYDKHYKIRKIAKRVIDVDCTHNVVKE 426
VH NP I+ EK DK ++ K +R++ CTHNV +
Sbjct: 399 VHLNPNSRIEN-REKSLDKTERVSKNVQRLVKEACTHNVASK 439
>AF325341-2|AAL38997.1| 5314|Homo sapiens macrophin 1 isoform 4
protein.
Length = 5314
Score = 30.7 bits (66), Expect = 3.3
Identities = 15/60 (25%), Positives = 30/60 (50%)
Frame = +1
Query: 238 ERHFRKRKMRFEDDMEVLYDGVHPNPLLAIQCINEKLYDKHYKIRKIAKRVIDVDCTHNV 417
E+ R+R + + + L D PL +Q I+ L ++ +R + K+V+D H++
Sbjct: 892 EKTVRERLISLQMETTGLIDPDSKAPLTVVQSIDRGLLEREEAVRLLTKQVVDGGIIHHI 951
>AF317696-1|AAL09459.1| 5938|Homo sapiens macrophin 1 isoform 4
protein.
Length = 5938
Score = 30.7 bits (66), Expect = 3.3
Identities = 15/60 (25%), Positives = 30/60 (50%)
Frame = +1
Query: 238 ERHFRKRKMRFEDDMEVLYDGVHPNPLLAIQCINEKLYDKHYKIRKIAKRVIDVDCTHNV 417
E+ R+R + + + L D PL +Q I+ L ++ +R + K+V+D H++
Sbjct: 892 EKTVRERLISLQMETTGLIDPDSKAPLTVVQSIDRGLLEREEAVRLLTKQVVDGGIIHHI 951
>X67482-1|CAA47824.1| 427|Homo sapiens HL-60 1,25-dihydroxyvitamin
D-3 receptor protein.
Length = 427
Score = 29.9 bits (64), Expect = 5.8
Identities = 24/88 (27%), Positives = 36/88 (40%), Gaps = 1/88 (1%)
Frame = +1
Query: 106 KTAIVTESKNGTVTFPRDITKHQHLAIFSERIDDRIKLAFVLGQERHFRKRKMRFE-DDM 282
+ A+ T NG +D +H +D + F+L E RKR+M + +
Sbjct: 54 RKALFTCPFNGDCRITKDNRRHCQACRLKRCVDIGMMKEFILTDEEVQRKREMILKRKEE 113
Query: 283 EVLYDGVHPNPLLAIQCINEKLYDKHYK 366
E L D + P Q I L D H+K
Sbjct: 114 EALKDSLRPKLSEEQQRIIAILLDAHHK 141
>J03258-1|AAA61273.1| 427|Homo sapiens VDR protein.
Length = 427
Score = 29.9 bits (64), Expect = 5.8
Identities = 24/88 (27%), Positives = 36/88 (40%), Gaps = 1/88 (1%)
Frame = +1
Query: 106 KTAIVTESKNGTVTFPRDITKHQHLAIFSERIDDRIKLAFVLGQERHFRKRKMRFE-DDM 282
+ A+ T NG +D +H +D + F+L E RKR+M + +
Sbjct: 54 RKALFTCPFNGDCRITKDNRRHCQACRLKRCVDIGMMKEFILTDEEVQRKREMILKRKEE 113
Query: 283 EVLYDGVHPNPLLAIQCINEKLYDKHYK 366
E L D + P Q I L D H+K
Sbjct: 114 EALKDSLRPKLSEEQQRIIAILLDAHHK 141
>BC060832-1|AAH60832.1| 427|Homo sapiens VDR protein protein.
Length = 427
Score = 29.9 bits (64), Expect = 5.8
Identities = 24/88 (27%), Positives = 36/88 (40%), Gaps = 1/88 (1%)
Frame = +1
Query: 106 KTAIVTESKNGTVTFPRDITKHQHLAIFSERIDDRIKLAFVLGQERHFRKRKMRFE-DDM 282
+ A+ T NG +D +H +D + F+L E RKR+M + +
Sbjct: 54 RKALFTCPFNGDCRITKDNRRHCQACRLKRCVDIGMMKEFILTDEEVQRKREMILKRKEE 113
Query: 283 EVLYDGVHPNPLLAIQCINEKLYDKHYK 366
E L D + P Q I L D H+K
Sbjct: 114 EALKDSLRPKLSEEQQRIIAILLDAHHK 141
>AY342401-1|AAP88938.1| 424|Homo sapiens vitamin D
(1,25-dihydroxyvitamin D3) receptor protein.
Length = 424
Score = 29.9 bits (64), Expect = 5.8
Identities = 24/88 (27%), Positives = 36/88 (40%), Gaps = 1/88 (1%)
Frame = +1
Query: 106 KTAIVTESKNGTVTFPRDITKHQHLAIFSERIDDRIKLAFVLGQERHFRKRKMRFE-DDM 282
+ A+ T NG +D +H +D + F+L E RKR+M + +
Sbjct: 51 RKALFTCPFNGDCRITKDNRRHCQACRLKRCVDIGMMKEFILTDEEVQRKREMILKRKEE 110
Query: 283 EVLYDGVHPNPLLAIQCINEKLYDKHYK 366
E L D + P Q I L D H+K
Sbjct: 111 EALKDSLRPKLSEEQQRIIAILLDAHHK 138
>AF026260-1|AAB95155.1| 427|Homo sapiens vitamin D receptor
protein.
Length = 427
Score = 29.9 bits (64), Expect = 5.8
Identities = 24/88 (27%), Positives = 36/88 (40%), Gaps = 1/88 (1%)
Frame = +1
Query: 106 KTAIVTESKNGTVTFPRDITKHQHLAIFSERIDDRIKLAFVLGQERHFRKRKMRFE-DDM 282
+ A+ T NG +D +H +D + F+L E RKR+M + +
Sbjct: 54 RKALFTCPFNGDCRITKDNRRHCQACRLKRCVDIGMMKEFILTDEEVQRKREMILKRKEE 113
Query: 283 EVLYDGVHPNPLLAIQCINEKLYDKHYK 366
E L D + P Q I L D H+K
Sbjct: 114 EALKDSLRPKLSEEQQRIIAILLDAHHK 141
>AB002168-1|BAA83389.1| 427|Homo sapiens vitamin D receptor
protein.
Length = 427
Score = 29.9 bits (64), Expect = 5.8
Identities = 24/88 (27%), Positives = 36/88 (40%), Gaps = 1/88 (1%)
Frame = +1
Query: 106 KTAIVTESKNGTVTFPRDITKHQHLAIFSERIDDRIKLAFVLGQERHFRKRKMRFE-DDM 282
+ A+ T NG +D +H +D + F+L E RKR+M + +
Sbjct: 54 RKALFTCPFNGDCRITKDNRRHCQACRLKRCVDIGMMKEFILTDEEVQRKREMILKRKEE 113
Query: 283 EVLYDGVHPNPLLAIQCINEKLYDKHYK 366
E L D + P Q I L D H+K
Sbjct: 114 EALKDSLRPKLSEEQQRIIAILLDAHHK 141
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,463,661
Number of Sequences: 237096
Number of extensions: 1364040
Number of successful extensions: 3429
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 3337
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3426
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5103531180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -