Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc28m03
(626 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 24 1.1
DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor pro... 23 1.8
DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase ... 23 1.8
DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase ... 23 1.8
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 23 2.4
AJ308527-1|CAC33429.1| 57|Apis mellifera defensin protein. 23 2.4
U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodops... 22 5.6
AY703752-1|AAU12748.1| 152|Apis mellifera long-wavelength rhodo... 21 7.4
AF144379-1|AAD34586.1| 543|Apis mellifera glutamate transporter... 21 7.4
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase... 21 7.4
DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor pr... 21 9.8
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 24.2 bits (50), Expect = 1.1
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = -3
Query: 330 AWSGPRPSPLTGARKTYG 277
A +PSP+TGA K++G
Sbjct: 357 AQKSQKPSPVTGASKSHG 374
>DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor
protein.
Length = 405
Score = 23.4 bits (48), Expect = 1.8
Identities = 13/44 (29%), Positives = 20/44 (45%)
Frame = +3
Query: 267 IRSFRTSCVRRSAEKVEDHSRLWVIERVVSAALVPLIPLALMMP 398
+RS + SC+ R A + + L V+ A +P L L P
Sbjct: 287 VRSHQQSCINRVARETKTAGTLAVVVGGFVACWLPFFILYLATP 330
>DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase
isoform B protein.
Length = 931
Score = 23.4 bits (48), Expect = 1.8
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = -2
Query: 340 MTQSLEWSSTFSADRRTQDVRNERIAFNMGVVLVSFIIFLT-GNELE 203
M+ SL+WSST + D + I ++ +S II + G++LE
Sbjct: 490 MSSSLQWSSTHTLDVAWRRKVTIEILNSLSATKLSKIILMQFGDKLE 536
>DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase
isoform A protein.
Length = 969
Score = 23.4 bits (48), Expect = 1.8
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = -2
Query: 340 MTQSLEWSSTFSADRRTQDVRNERIAFNMGVVLVSFIIFLT-GNELE 203
M+ SL+WSST + D + I ++ +S II + G++LE
Sbjct: 528 MSSSLQWSSTHTLDVAWRRKVTIEILNSLSATKLSKIILMQFGDKLE 574
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 23.0 bits (47), Expect = 2.4
Identities = 8/23 (34%), Positives = 12/23 (52%)
Frame = +2
Query: 356 CCTGPIDSVSPHDAEQTIRLSPG 424
CC D + P+ + IR+ PG
Sbjct: 446 CCFAQDDGLCPYTLKHKIRVPPG 468
>AJ308527-1|CAC33429.1| 57|Apis mellifera defensin protein.
Length = 57
Score = 23.0 bits (47), Expect = 2.4
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = +2
Query: 515 NCHRLGVSHLHCNTG 559
NCH LG + HC G
Sbjct: 38 NCHSLGKAGGHCEKG 52
>U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodopsin
protein.
Length = 377
Score = 21.8 bits (44), Expect = 5.6
Identities = 9/48 (18%), Positives = 21/48 (43%)
Frame = -2
Query: 292 TQDVRNERIAFNMGVVLVSFIIFLTGNELEIIRCVIAGWVASLIACWV 149
T+ +R F + + + +F++ + +I C WV + C +
Sbjct: 80 TKSLRTPSNLFVINLAISNFLMMFCMSPPMVINCYYETWVLGPLFCQI 127
>AY703752-1|AAU12748.1| 152|Apis mellifera long-wavelength
rhodopsin protein.
Length = 152
Score = 21.4 bits (43), Expect = 7.4
Identities = 9/48 (18%), Positives = 20/48 (41%)
Frame = -2
Query: 292 TQDVRNERIAFNMGVVLVSFIIFLTGNELEIIRCVIAGWVASLIACWV 149
T+ +R F + + + F++ + +I C WV + C +
Sbjct: 46 TKSLRTPSNLFVINLAISDFLMMFCMSPPMVINCYYETWVLGPLFCQI 93
>AF144379-1|AAD34586.1| 543|Apis mellifera glutamate transporter
Am-EAAT protein.
Length = 543
Score = 21.4 bits (43), Expect = 7.4
Identities = 14/66 (21%), Positives = 33/66 (50%)
Frame = +3
Query: 354 SAALVPLIPLALMMPNKLFDSLLAILITAHSFWGLEAIAVDYVRASIFGPILPKIAIGLV 533
SAA +P+ L NK+ + ++ + ++ A+ A+IF + I++G+
Sbjct: 363 SAATLPITFRCLEENNKIDSRVTRFVVAVGATVNMDGTALYEAVAAIFIAQMNGISLGIG 422
Query: 534 YLISIA 551
+I+++
Sbjct: 423 EVITVS 428
>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
protein.
Length = 1143
Score = 21.4 bits (43), Expect = 7.4
Identities = 12/54 (22%), Positives = 24/54 (44%)
Frame = -2
Query: 505 IGPNILART*STAIASRPQKL*AVISIARRESNSLFGIMRANGINGTSAAETTL 344
+G L+ I + PQ + +S + + + R ++G S++ TTL
Sbjct: 684 LGSEALSAATVRFIEAEPQPIGKALSKCHNRNVTTCNMFRKTNLSGDSSSGTTL 737
>DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor
protein.
Length = 459
Score = 21.0 bits (42), Expect = 9.8
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = -2
Query: 250 VVLVSFIIFLTGNELEIIRCVI 185
+ L +IF+TG II C++
Sbjct: 36 ITLTYVVIFVTGFVGNIITCIV 57
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,020
Number of Sequences: 438
Number of extensions: 4320
Number of successful extensions: 13
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18704709
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -