Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc28m02
         (505 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    25   0.51 
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    25   0.51 
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    23   1.2  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    23   1.2  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    22   3.6  
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    21   6.3  

>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 24.6 bits (51), Expect = 0.51
 Identities = 13/42 (30%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
 Frame = -1

Query: 172 SPIGSATKFLC-FCDVLDIFVKNFVYCTYRKKQILYLSIFTK 50
           +P+   T  L  +C VL +F+  F    +RKK +  + I +K
Sbjct: 64  TPLAKITTILQRYCSVLLVFLTYFFNILFRKKLLNAVKILSK 105


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 24.6 bits (51), Expect = 0.51
 Identities = 13/42 (30%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
 Frame = -1

Query: 172 SPIGSATKFLC-FCDVLDIFVKNFVYCTYRKKQILYLSIFTK 50
           +P+   T  L  +C VL +F+  F    +RKK +  + I +K
Sbjct: 60  TPLAKITTILQRYCSVLLVFLTYFFNILFRKKLLNAVKILSK 101


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 21/84 (25%), Positives = 32/84 (38%), Gaps = 1/84 (1%)
 Frame = -2

Query: 276 VPKIDPRRHRPYRSPRFQVVFLKLHPRPPILLLVSHPLAQQQSFYVFVMYSTFS*KT-LF 100
           V KI    H  Y+   F V    L     I  +V        + Y+F+   +    T   
Sbjct: 254 VQKIQELSHLHYKLANFTVKISGLFEITTITAMVMWFGYVIDTMYLFIHIRSRQEDTDTL 313

Query: 99  IVLIERNKFYICLSLRSLLVFLCI 28
           +V+   N FY+C     LLV + +
Sbjct: 314 VVIYTFNLFYLCFCFYWLLVMVAM 337



 Score = 21.8 bits (44), Expect = 3.6
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = -1

Query: 154 TKFLCFCDVLDIFVKNFVYCTYRKK 80
           ++FLC       F  +++Y TY +K
Sbjct: 77  SRFLCLPFYSYFFYLSYIYTTYSRK 101


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 21/84 (25%), Positives = 32/84 (38%), Gaps = 1/84 (1%)
 Frame = -2

Query: 276 VPKIDPRRHRPYRSPRFQVVFLKLHPRPPILLLVSHPLAQQQSFYVFVMYSTFS*KT-LF 100
           V KI    H  Y+   F V    L     I  +V        + Y+F+   +    T   
Sbjct: 210 VQKIQELSHLHYKLANFTVKISGLFEITTITAMVMWFGYVIDTMYLFIHIRSRQEDTDTL 269

Query: 99  IVLIERNKFYICLSLRSLLVFLCI 28
           +V+   N FY+C     LLV + +
Sbjct: 270 VVIYTFNLFYLCFCFYWLLVMVAM 293



 Score = 21.8 bits (44), Expect = 3.6
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = -1

Query: 154 TKFLCFCDVLDIFVKNFVYCTYRKK 80
           ++FLC       F  +++Y TY +K
Sbjct: 33  SRFLCLPFYSYFFYLSYIYTTYSRK 57


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = -2

Query: 189 ILLLVSHPLAQQQSFYVFVMYSTFS*KTLFIVLIERNKFYI 67
           ILL+    +A    F   V+ S  + +T+  V I RN+F I
Sbjct: 151 ILLISQDVIANVLLFIFIVVKSGVAFQTIEFVSIIRNRFVI 191


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 9/45 (20%), Positives = 21/45 (46%)
 Frame = -1

Query: 139 FCDVLDIFVKNFVYCTYRKKQILYLSIFTKFISFFVYFVVINLIK 5
           FC +  + +   +   YR++ +  L I TK  +      ++ ++K
Sbjct: 53  FCSLFIVVILKLILAKYRQQDVTLLQI-TKAKNLLYSKQIVTILK 96


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,925
Number of Sequences: 336
Number of extensions: 2542
Number of successful extensions: 13
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11944578
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)