Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc28m02
         (505 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011552-1|AAS15688.1|   90|Drosophila melanogaster GH06291p pro...   154   6e-38
AE014134-1382|AAF52592.1|   90|Drosophila melanogaster CG7380-PA...   154   6e-38
AF106677-1|AAD05225.1|  693|Drosophila melanogaster dissatisfact...    28   6.2  
AE014134-989|AAF52303.1|  691|Drosophila melanogaster CG9019-PA ...    28   6.2  
L02965-1|AAA74931.1|  801|Drosophila melanogaster helicase protein.    28   8.3  
AY119556-1|AAM50210.1| 1272|Drosophila melanogaster GH28840p pro...    28   8.3  
AF313479-1|AAG29545.1| 4167|Drosophila melanogaster 1-beta dynei...    28   8.3  
AF272778-1|AAM13390.1|  807|Drosophila melanogaster nicotinic ac...    28   8.3  
AE014298-1554|AAF48000.3| 3539|Drosophila melanogaster CG11122-P...    28   8.3  
AE014134-2461|AAS64703.1|  808|Drosophila melanogaster CG32975-P...    28   8.3  
AE014134-2460|AAS64702.1|  786|Drosophila melanogaster CG32975-P...    28   8.3  

>BT011552-1|AAS15688.1|   90|Drosophila melanogaster GH06291p
           protein.
          Length = 90

 Score =  154 bits (374), Expect = 6e-38
 Identities = 66/90 (73%), Positives = 77/90 (85%)
 Frame = +3

Query: 120 MSSTSQKHRNFVAEPMGEKPVTELAGVGEVLGKRLETGGFDKAYVVLGQFLVLKKDKELF 299
           MS TSQKHRNFVAEPMG K VTELAG+GE LG RL+  GFD AY VLGQ+LVLKKD+ELF
Sbjct: 1   MSGTSQKHRNFVAEPMGNKSVTELAGIGETLGGRLKDAGFDMAYTVLGQYLVLKKDEELF 60

Query: 300 QEWMKDACSANSKQSADCYQCLKDWCDEFL 389
           ++WMK+ C A+SKQ++DCY CL DWC+EFL
Sbjct: 61  KDWMKEVCHASSKQASDCYNCLNDWCEEFL 90


>AE014134-1382|AAF52592.1|   90|Drosophila melanogaster CG7380-PA
           protein.
          Length = 90

 Score =  154 bits (374), Expect = 6e-38
 Identities = 66/90 (73%), Positives = 77/90 (85%)
 Frame = +3

Query: 120 MSSTSQKHRNFVAEPMGEKPVTELAGVGEVLGKRLETGGFDKAYVVLGQFLVLKKDKELF 299
           MS TSQKHRNFVAEPMG K VTELAG+GE LG RL+  GFD AY VLGQ+LVLKKD+ELF
Sbjct: 1   MSGTSQKHRNFVAEPMGNKSVTELAGIGETLGGRLKDAGFDMAYTVLGQYLVLKKDEELF 60

Query: 300 QEWMKDACSANSKQSADCYQCLKDWCDEFL 389
           ++WMK+ C A+SKQ++DCY CL DWC+EFL
Sbjct: 61  KDWMKEVCHASSKQASDCYNCLNDWCEEFL 90


>AF106677-1|AAD05225.1|  693|Drosophila melanogaster dissatisfaction
           protein.
          Length = 693

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 14/40 (35%), Positives = 23/40 (57%)
 Frame = -1

Query: 277 STKN*PKTT*ALSKPPVSSRFPKTSPTPANSVTGFSPIGS 158
           S+ + P  + A +  P S+    +SP+P+NS+   S IGS
Sbjct: 288 SSTSTPYASAAQASSPSSNNHNYSSPSPSNSIQSISSIGS 327


>AE014134-989|AAF52303.1|  691|Drosophila melanogaster CG9019-PA
           protein.
          Length = 691

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 14/40 (35%), Positives = 23/40 (57%)
 Frame = -1

Query: 277 STKN*PKTT*ALSKPPVSSRFPKTSPTPANSVTGFSPIGS 158
           S+ + P  + A +  P S+    +SP+P+NS+   S IGS
Sbjct: 288 SSTSTPYASAAQTSSPSSNNHNYSSPSPSNSIQSISSIGS 327


>L02965-1|AAA74931.1|  801|Drosophila melanogaster helicase protein.
          Length = 801

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 10/26 (38%), Positives = 19/26 (73%)
 Frame = +3

Query: 12  KFMTTKYTKKLINFVKIDKYKICFFL 89
           +++TTK +KK++ +V   K++ C FL
Sbjct: 541 EYLTTKTSKKMLLYVNPSKFRSCQFL 566


>AY119556-1|AAM50210.1| 1272|Drosophila melanogaster GH28840p
           protein.
          Length = 1272

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = -1

Query: 262 PKTT*ALSKPPVSSRFPKTSPTPANSVTGFSPIGSATK 149
           P  + +LS PP +S  P  SP P    T  +P+ +A +
Sbjct: 315 PPASPSLSLPPPASPSPSPSPPPPAEATAPAPVPAAAQ 352


>AF313479-1|AAG29545.1| 4167|Drosophila melanogaster 1-beta dynein
           protein.
          Length = 4167

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 5/47 (10%)
 Frame = +3

Query: 243 KAYVVLGQFLVLKK--DKEL---FQEWMKDACSANSKQSADCYQCLK 368
           +A VVL +F  +++  DKE+   F EW K+ CS    Q  D Y  ++
Sbjct: 307 EASVVLKKFESVRREFDKEVKKSFDEWQKNCCSLLLNQKLDRYLLIR 353


>AF272778-1|AAM13390.1|  807|Drosophila melanogaster nicotinic
           acetylcholine receptorDalpha5 subunit protein.
          Length = 807

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +1

Query: 130 HHKNIETLLLSQWVRNQ*QNWRAWV 204
           HH+N +T  +S+W+R     W  W+
Sbjct: 607 HHRNADTHEMSEWIRIVFLCWLPWI 631


>AE014298-1554|AAF48000.3| 3539|Drosophila melanogaster CG11122-PA
            protein.
          Length = 3539

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = -1

Query: 262  PKTT*ALSKPPVSSRFPKTSPTPANSVTGFSPIGSATK 149
            P  + +LS PP +S  P  SP P    T  +P+ +A +
Sbjct: 2582 PPASPSLSLPPPASPSPSPSPPPPAEATAPAPVPAAAQ 2619


>AE014134-2461|AAS64703.1|  808|Drosophila melanogaster CG32975-PB,
           isoform B protein.
          Length = 808

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +1

Query: 130 HHKNIETLLLSQWVRNQ*QNWRAWV 204
           HH+N +T  +S+W+R     W  W+
Sbjct: 608 HHRNADTHEMSEWIRIVFLCWLPWI 632


>AE014134-2460|AAS64702.1|  786|Drosophila melanogaster CG32975-PC,
           isoform C protein.
          Length = 786

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +1

Query: 130 HHKNIETLLLSQWVRNQ*QNWRAWV 204
           HH+N +T  +S+W+R     W  W+
Sbjct: 586 HHRNADTHEMSEWIRIVFLCWLPWI 610


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,393,239
Number of Sequences: 53049
Number of extensions: 409562
Number of successful extensions: 1192
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1153
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1192
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1804766976
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)