Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc28l24
         (459 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    24   2.2  
AY928182-1|AAX22219.1|  335|Anopheles gambiae phenoloxidase inhi...    23   6.8  
AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ chann...    23   6.8  
AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium ch...    23   6.8  

>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
           protein.
          Length = 1077

 Score = 24.2 bits (50), Expect = 2.2
 Identities = 15/47 (31%), Positives = 24/47 (51%)
 Frame = -2

Query: 389 SSRTGTAEMLLSLLQIKAYELTAHLYVLCWGKQNLSTVQN*SLSSGS 249
           +SR GTA  L   L+    E +    ++C   +N++T+ N    SGS
Sbjct: 70  ASRRGTAIALRDHLKFSHVERSLDSRLICVRLENIATLCNVYAPSGS 116


>AY928182-1|AAX22219.1|  335|Anopheles gambiae phenoloxidase
           inhibitor protein protein.
          Length = 335

 Score = 22.6 bits (46), Expect = 6.8
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = +2

Query: 344 SGAMTKAFLQFPYESFNKYSISLCLSKN 427
           S   +K+ L F Y+  N+Y +S+    N
Sbjct: 178 SECCSKSCLSFAYKCVNRYDLSVVADPN 205


>AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ channel
           protein.
          Length = 574

 Score = 22.6 bits (46), Expect = 6.8
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +3

Query: 363 HFCSSRTRALISILFHSVS 419
           +FCSS +     I+FHS S
Sbjct: 286 YFCSSTSSVGFKIIFHSPS 304


>AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium
           channel protein.
          Length = 572

 Score = 22.6 bits (46), Expect = 6.8
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +3

Query: 363 HFCSSRTRALISILFHSVS 419
           +FCSS +     I+FHS S
Sbjct: 286 YFCSSTSSVGFKIIFHSPS 304


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 373,464
Number of Sequences: 2352
Number of extensions: 6036
Number of successful extensions: 11
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 39544623
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)