Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc28l24
         (459 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY089637-1|AAL90375.1|  343|Drosophila melanogaster RE54285p pro...    29   4.0  
AE013599-93|AAF57322.1|  343|Drosophila melanogaster CG8245-PA p...    29   4.0  
AE013599-3815|AAF47164.2| 2291|Drosophila melanogaster CG11290-P...    27   9.2  

>AY089637-1|AAL90375.1|  343|Drosophila melanogaster RE54285p
           protein.
          Length = 343

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 13/41 (31%), Positives = 21/41 (51%)
 Frame = -1

Query: 420 ERQSEIEYLLKLSYGNCRNAFVIAPDKSLRAYGPPLCSMLG 298
           ER+  +EY +K    + +N FV+A D        P+  +LG
Sbjct: 42  EREDTLEYFIKFPKPSSKNEFVLAKDHDGEDSHVPIVMLLG 82


>AE013599-93|AAF57322.1|  343|Drosophila melanogaster CG8245-PA
           protein.
          Length = 343

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 13/41 (31%), Positives = 21/41 (51%)
 Frame = -1

Query: 420 ERQSEIEYLLKLSYGNCRNAFVIAPDKSLRAYGPPLCSMLG 298
           ER+  +EY +K    + +N FV+A D        P+  +LG
Sbjct: 42  EREDTLEYFIKFPKPSSKNEFVLAKDHDGEDSHVPIVMLLG 82


>AE013599-3815|AAF47164.2| 2291|Drosophila melanogaster CG11290-PA
            protein.
          Length = 2291

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 11/24 (45%), Positives = 19/24 (79%), Gaps = 1/24 (4%)
 Frame = -1

Query: 267  IIIERECIRWTP-VNLTPLPGSIQ 199
            IIIE +C+RW+P ++++ LP  I+
Sbjct: 977  IIIEPDCLRWSPLLSVSKLPNIIK 1000


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,824,615
Number of Sequences: 53049
Number of extensions: 267363
Number of successful extensions: 614
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 595
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 614
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1518217281
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)