Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc28l17
(747 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subuni... 231 6e-62
SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit C... 135 5e-33
SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subu... 134 1e-32
SPBC106.06 |cct4||chaperonin-containing T-complex delta subunit ... 132 7e-32
SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit ... 131 1e-31
SPBC1A4.08c |cct3||chaperonin-containing T-complex gamma subunit... 126 3e-30
SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit C... 108 9e-25
SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit... 97 3e-21
SPAC12G12.04 |hsp60|hsp60|mitochondrial heat shock protein Hsp60... 52 9e-08
SPCC63.03 |||DNAJ domain protein, DNAJC11 family|Schizosaccharom... 27 2.1
SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces po... 27 2.8
SPBC8E4.01c ||SPBP4G3.01|inorganic phosphate transporter |Schizo... 27 3.8
SPBC1683.01 |||inorganic phosphate transporter |Schizosaccharomy... 27 3.8
SPBC21C3.01c |vps13a|vps1301, SPBC31F10.18c|chorein homolog|Schi... 26 5.0
SPAC23D3.12 |||inorganic phosphate transporter |Schizosaccharomy... 26 6.6
SPAC13G6.06c |||glycine cleavage complex subunit P|Schizosacchar... 25 8.7
SPCC794.01c |||glucose-6-phosphate 1-dehydrogenase |Schizosaccha... 25 8.7
>SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subunit
Cct1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 556
Score = 231 bits (566), Expect = 6e-62
Identities = 114/174 (65%), Positives = 143/174 (82%)
Frame = +3
Query: 102 LSVAGTRSCGDPVRTQNVMXXXXXXNIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILKM 281
L ++G + G+ VR QNV+ N+VKSSLGPVGLDKMLVDDIGDVTVTNDGATIL +
Sbjct: 10 LFLSGEKISGEDVRNQNVLATTAIANVVKSSLGPVGLDKMLVDDIGDVTVTNDGATILSL 69
Query: 282 LEVEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGYRLA 461
L+VEHPA KVLVELAQ QD+EVGDGTTSVVIIAAELL+ A+ELVK KIHPT+II+GYRLA
Sbjct: 70 LDVEHPAGKVLVELAQQQDKEVGDGTTSVVIIAAELLRRANELVKNKIHPTTIITGYRLA 129
Query: 462 CKEAVKYIQDNLTVTVESLGRPSLINTAKTTMSSKLIGAYPLYYKLSFIEALIN 623
+EAVK++ D L+ +V+SLG+ SLIN AKT+MSSK+IG ++ ++A+++
Sbjct: 130 IREAVKFMTDVLSCSVDSLGKESLINVAKTSMSSKIIGNDSDFFSTMAVDAMLS 183
>SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit
Cct2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 527
Score = 135 bits (327), Expect = 5e-33
Identities = 73/175 (41%), Positives = 114/175 (65%), Gaps = 5/175 (2%)
Frame = +3
Query: 111 AGTRSCGDPVRTQNVMXXXXXXNIVKSSLGPVGLDKMLVDDI-GDVTVTNDGATILKMLE 287
+G + G+ R + + ++VKS+LGP G+DK+L + GD+ VTNDGATILK +
Sbjct: 12 SGIQERGENARLSSFVGAIAVGDLVKSTLGPKGMDKILQSNSSGDIVVTNDGATILKSIA 71
Query: 288 VEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGYRLACK 467
+++ AAKVLV ++++QD+EVGDGTTSV + AAELL+ A+ +V KIHP II GYR+A K
Sbjct: 72 LDNAAAKVLVNISKVQDDEVGDGTTSVCVFAAELLRQAEIMVNAKIHPQVIIDGYRIATK 131
Query: 468 EAVKYIQ----DNLTVTVESLGRPSLINTAKTTMSSKLIGAYPLYYKLSFIEALI 620
A+ ++ DN + + R L N A+TT+SSK++ ++ ++A++
Sbjct: 132 TAIDALRASSIDNSSDPAKF--RSDLENIARTTLSSKILSQNKNHFAQLAVDAVL 184
>SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subunit
Cct5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 546
Score = 134 bits (325), Expect = 1e-32
Identities = 68/165 (41%), Positives = 108/165 (65%), Gaps = 1/165 (0%)
Frame = +3
Query: 132 DPVRTQNVMXXXXXXNIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLEVEHPAAKV 311
D V++ +++ NIV++SLGP GLDK+L+ G++TVTNDGATIL +EVEH AK+
Sbjct: 34 DAVKS-HILATKTVANIVRTSLGPRGLDKILISPDGEITVTNDGATILDQMEVEHQIAKL 92
Query: 312 LVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGYRLACKEAVKYIQD 491
LV+L++ QD+E+GDGTT VV++A LL+ A+ L+ IHP I GY AC+ AVK++
Sbjct: 93 LVQLSKSQDDEIGDGTTGVVVLAGALLEQAEALIDKGIHPIRIADGYEKACQVAVKHLDA 152
Query: 492 -NLTVTVESLGRPSLINTAKTTMSSKLIGAYPLYYKLSFIEALIN 623
+ V +L +AKT++ SK++ ++ ++A+++
Sbjct: 153 ISDVVDFSPENTTNLFRSAKTSLGSKVVSKAHDHFANIAVDAVLS 197
>SPBC106.06 |cct4||chaperonin-containing T-complex delta subunit
Cct4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 527
Score = 132 bits (318), Expect = 7e-32
Identities = 67/148 (45%), Positives = 97/148 (65%)
Frame = +3
Query: 138 VRTQNVMXXXXXXNIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLEVEHPAAKVLV 317
VR N+M + +++SLGP G+DKM+ G+V +TNDGATILK L V HPAAK+LV
Sbjct: 20 VRLSNIMAARSVADAIRTSLGPKGMDKMIQTGKGEVILTNDGATILKHLSVLHPAAKMLV 79
Query: 318 ELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGYRLACKEAVKYIQDNL 497
+L+ QD E GDGTTSVVI+A +L A++L+K IHPT I ++ A V +++N
Sbjct: 80 DLSAAQDVEAGDGTTSVVILAGSMLACAEKLLKKGIHPTVIAESFQRAAGFTVDCMKEN- 138
Query: 498 TVTVESLGRPSLINTAKTTMSSKLIGAY 581
+ +E R SL+ A T+++SK++ Y
Sbjct: 139 ALAIELSDRESLLRAATTSLNSKIVSQY 166
>SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit
Cct7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 558
Score = 131 bits (316), Expect = 1e-31
Identities = 67/160 (41%), Positives = 104/160 (65%), Gaps = 3/160 (1%)
Frame = +3
Query: 150 NVMXXXXXXNIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLEVEHPAAKVLVELAQ 329
N+ + ++++LGP+G DK++VDD G+V ++NDGATI+K+L++ HPAAK LV++A+
Sbjct: 29 NINACVAVQDTIRTTLGPLGADKLMVDDRGEVVISNDGATIMKLLDIVHPAAKTLVDIAR 88
Query: 330 LQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGYRLACKEAVKYIQD---NLT 500
QD EVGDGTTSVV+ A ELL+ A V+ + II GYR A + AV I++ +L
Sbjct: 89 AQDAEVGDGTTSVVVFAGELLREARTFVEDGVSSHLIIRGYRKAAQLAVNKIKEIAIHLD 148
Query: 501 VTVESLGRPSLINTAKTTMSSKLIGAYPLYYKLSFIEALI 620
++ E R L A T M+SKLI + ++ ++A++
Sbjct: 149 LSDEGKLRDLLTKCASTAMNSKLIRSNSTFFTKMVVDAVL 188
>SPBC1A4.08c |cct3||chaperonin-containing T-complex gamma subunit
Cct3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 528
Score = 126 bits (305), Expect = 3e-30
Identities = 61/160 (38%), Positives = 97/160 (60%)
Frame = +3
Query: 102 LSVAGTRSCGDPVRTQNVMXXXXXXNIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILKM 281
++ G R G + N+ +++++ LGP + KML+D +G V +TNDG IL+
Sbjct: 8 MNTNGNRQVGHKAQMSNIQAAKAVADVIRTCLGPRAMLKMLLDPVGSVLLTNDGHAILRE 67
Query: 282 LEVEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGYRLA 461
+EV HPAAK ++ELA+ QDEEVGDGTTSV+I+A E+L A L+ KIHP +I ++ A
Sbjct: 68 IEVAHPAAKSMIELARTQDEEVGDGTTSVIILAGEILAAASPLLDRKIHPVVMIRSFKQA 127
Query: 462 CKEAVKYIQDNLTVTVESLGRPSLINTAKTTMSSKLIGAY 581
++A+ I D +T+ V + +T + +KL+ +
Sbjct: 128 LEDALSII-DEITLPVNVDDNAEMFRLIRTCIGTKLVARW 166
>SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit
Cct6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 535
Score = 108 bits (259), Expect = 9e-25
Identities = 52/140 (37%), Positives = 86/140 (61%)
Frame = +3
Query: 150 NVMXXXXXXNIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLEVEHPAAKVLVELAQ 329
N+ +++KS+LGP G KMLVD G + +T DG +L +++++P A + + A
Sbjct: 21 NISAAIGLQDVLKSNLGPTGTTKMLVDGAGAIKLTKDGKVLLTEMQIQNPTASCIAKAAT 80
Query: 330 LQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGYRLACKEAVKYIQDNLTVTV 509
QD+ GDGTTSV ++ ELLK A+ ++ +HP+ I G+ LA EA+ ++ D+
Sbjct: 81 AQDDATGDGTTSVCLLVGELLKQAELYIREGLHPSLISDGFNLAKNEALTFL-DSFKTDF 139
Query: 510 ESLGRPSLINTAKTTMSSKL 569
E + R L+N AKT++S+K+
Sbjct: 140 E-VDREVLLNVAKTSLSTKI 158
>SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit
Cct8 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 546
Score = 96.7 bits (230), Expect = 3e-21
Identities = 47/133 (35%), Positives = 79/133 (59%), Gaps = 1/133 (0%)
Frame = +3
Query: 180 IVKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLEVEHPAAKVLVELAQLQDEEVGDGT 359
I ++SLGP G +K++V+ + +TND ATI++ LEV HPAAK++V+ Q Q+ E+GD
Sbjct: 41 ITRTSLGPNGKNKIVVNHLQQTFLTNDAATIIRELEVIHPAAKLVVDATQQQENELGDAA 100
Query: 360 TSVVIIAAELLKNADELVKTKIHPTSIISGYRLACKEAVKYIQDNLTVTVESL-GRPSLI 536
VV+ ELL A+ +++ + P I GY +A ++ +++ +E++ LI
Sbjct: 101 NFVVVFTGELLAKAENMIRMGLTPLEIAKGYEMALSHTMEVLEEICADKIETVESEKELI 160
Query: 537 NTAKTTMSSKLIG 575
+T +SSK G
Sbjct: 161 KAIRTCISSKQYG 173
>SPAC12G12.04 |hsp60|hsp60|mitochondrial heat shock protein
Hsp60|Schizosaccharomyces pombe|chr 1|||Manual
Length = 582
Score = 52.0 bits (119), Expect = 9e-08
Identities = 32/136 (23%), Positives = 64/136 (47%), Gaps = 6/136 (4%)
Frame = +3
Query: 183 VKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLEV----EHPAAKVLVELAQLQDEEVG 350
V +LGP G + ++ G +T DG T+ + + + E+ A+++ ++A +E G
Sbjct: 58 VSVTLGPKGRNVLIDQPFGSPKITKDGVTVARSVSLKDKFENLGARLVQDVASKTNEVAG 117
Query: 351 DGTTSVVIIAAELLKNADELVKTKIHPTSIISGYRLACKEAVKYIQDNL--TVTVESLGR 524
DGTT+ ++ + V +P + G +LA V+++Q N T E + +
Sbjct: 118 DGTTTATVLTRAIFSETVRNVAAGCNPMDLRRGIQLAVDNVVEFLQANKRDITTSEEISQ 177
Query: 525 PSLINTAKTTMSSKLI 572
+ I+ T +L+
Sbjct: 178 VATISANGDTHIGELL 193
>SPCC63.03 |||DNAJ domain protein, DNAJC11
family|Schizosaccharomyces pombe|chr 3|||Manual
Length = 642
Score = 27.5 bits (58), Expect = 2.1
Identities = 20/96 (20%), Positives = 46/96 (47%), Gaps = 3/96 (3%)
Frame = +3
Query: 312 LVELAQLQDEEVGDGTTSV--VIIAAELLKNADELVKTKIHPTSIISGYRLA-CKEAVKY 482
L+ L +L+D + +++ V + E+++ +L K + YR+ C
Sbjct: 478 LLRLQKLKDSQERKKVSAIRAVKLMKEIVEKKQKLEMEKGGLVIEYAEYRVVNCGANEPD 537
Query: 483 IQDNLTVTVESLGRPSLINTAKTTMSSKLIGAYPLY 590
++ ++T+++ +L S + + S +IG YPL+
Sbjct: 538 LKQDVTISIAALVENSRLAIPSSVSKSSIIGIYPLF 573
>SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 897
Score = 27.1 bits (57), Expect = 2.8
Identities = 10/31 (32%), Positives = 20/31 (64%)
Frame = +3
Query: 360 TSVVIIAAELLKNADELVKTKIHPTSIISGY 452
T++++++ LL E + TK+HP+ +S Y
Sbjct: 302 TNLIVVSVALLHQWAEELSTKVHPSKKLSVY 332
>SPBC8E4.01c ||SPBP4G3.01|inorganic phosphate transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 572
Score = 26.6 bits (56), Expect = 3.8
Identities = 7/18 (38%), Positives = 14/18 (77%)
Frame = +1
Query: 190 APLGQLVWIRCWLTILGM 243
+PL +++W+ CW +LG+
Sbjct: 149 SPLSKMMWVFCWRWLLGV 166
>SPBC1683.01 |||inorganic phosphate transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 573
Score = 26.6 bits (56), Expect = 3.8
Identities = 7/18 (38%), Positives = 14/18 (77%)
Frame = +1
Query: 190 APLGQLVWIRCWLTILGM 243
+PL +++W+ CW +LG+
Sbjct: 149 SPLSKMMWVFCWRWLLGV 166
>SPBC21C3.01c |vps13a|vps1301, SPBC31F10.18c|chorein
homolog|Schizosaccharomyces pombe|chr 2|||Manual
Length = 3071
Score = 26.2 bits (55), Expect = 5.0
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +3
Query: 489 DNLTVTVESLGRPSLINTAKTTMSSKLIGAYPLYYKLSFIEALINRYHREE 641
DN +T SLG + NTA M+ ++ + Y+K+ + A+ + Y R E
Sbjct: 849 DNFQITHTSLGSHANENTAAQFMAQQI---FAFYFKVDY--AICSLYRRSE 894
>SPAC23D3.12 |||inorganic phosphate transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 559
Score = 25.8 bits (54), Expect = 6.6
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = +1
Query: 193 PLGQLVWIRCWLTILGM 243
PLG+++WI W +LG+
Sbjct: 145 PLGKMMWIFAWRWLLGL 161
>SPAC13G6.06c |||glycine cleavage complex subunit
P|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1017
Score = 25.4 bits (53), Expect = 8.7
Identities = 17/59 (28%), Positives = 26/59 (44%)
Frame = +3
Query: 324 AQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGYRLACKEAVKYIQDNLT 500
A L DE G V+++A + K LV I+P ++ A +K DN+T
Sbjct: 192 ASLLDEGTAAGEAMVMLMANDKKKRKTFLVDKNIYPNTLSVLRTRASGFGIKIELDNIT 250
>SPCC794.01c |||glucose-6-phosphate 1-dehydrogenase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 475
Score = 25.4 bits (53), Expect = 8.7
Identities = 21/96 (21%), Positives = 43/96 (44%), Gaps = 4/96 (4%)
Frame = +3
Query: 369 VIIAAELLKNADELVKTKIHPTSIISGYRLACKEAVKYIQDNLTVTVESLGRP-SLINTA 545
+++ L EL+K+K HP +++ RL ++ + + + + L + S +T
Sbjct: 115 LVLPPHLFAPVSELIKSKAHPNGMVT--RLIVEKPIGFDYKSADAILSDLSKHWSAKDTF 172
Query: 546 KTT--MSSKLI-GAYPLYYKLSFIEALINRYHREEI 644
K + +I G + + S E + NR H E +
Sbjct: 173 KVDHFLGEDMIDGFTAIRFANSMFEPIWNREHIESV 208
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,819,938
Number of Sequences: 5004
Number of extensions: 54559
Number of successful extensions: 134
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 127
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 130
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 355273338
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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