Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc28l17
(747 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_0729 + 27612106-27612195,27612284-27612370,27612469-276125... 161 7e-40
03_05_0339 + 23287620-23287676,23287784-23287849,23287937-232880... 137 8e-33
06_03_1193 - 28298656-28298754,28299303-28299377,28299456-282995... 133 1e-31
06_03_0477 - 21250811-21250981,21251261-21251374,21251447-212516... 121 5e-28
06_03_0353 + 19810945-19810975,19811308-19811369,19811741-198118... 118 4e-27
02_02_0253 - 8325437-8325628,8325705-8325779,8325933-8326037,832... 118 4e-27
05_07_0067 + 27463703-27463705,27464309-27464365,27464779-274648... 115 3e-26
02_02_0739 - 13560241-13560622,13561192-13561239,13563727-13564949 112 3e-25
03_06_0362 + 33379489-33379624,33380161-33380423,33380524-333806... 106 2e-23
10_08_0620 - 19321612-19323237 105 4e-23
05_01_0337 - 2658647-2658722,2658797-2658915,2658995-2659102,265... 97 2e-20
02_01_0024 + 159595-159801,159892-160017,160201-160338,160431-16... 57 2e-08
06_01_0097 - 810283-810296,810398-810521,810974-811066,811144-81... 55 5e-08
12_01_1011 + 10292709-10292765,10293003-10293156,10294062-102941... 53 2e-07
03_06_0760 - 36067752-36068045,36068260-36068711,36069263-360695... 53 3e-07
09_06_0292 + 22075647-22075691,22077394-22077507,22077602-220778... 46 3e-05
03_01_0305 - 2383187-2383298,2383606-2383684,2383762-2383867,238... 46 3e-05
05_06_0240 - 26629218-26629323,26629412-26629490,26629656-266297... 42 4e-04
10_08_0289 + 16534063-16534100,16534219-16534243,16534847-165349... 36 0.026
07_03_1624 + 28204892-28205024,28205160-28205242,28205305-282053... 32 0.42
07_03_1677 + 28596243-28596320,28596803-28596931,28597040-285972... 30 1.7
04_01_0006 - 112476-114182,114627-114676,115289-115463 30 2.2
07_03_1649 - 28385289-28385358,28387039-28387877 29 5.2
03_03_0113 + 14550435-14550822,14550831-14551660,14552105-145522... 28 6.9
03_05_0717 + 27097367-27097621,27097744-27097866,27098136-270983... 28 9.1
>04_04_0729 +
27612106-27612195,27612284-27612370,27612469-27612528,
27612554-27612688,27612769-27612864,27613149-27613214,
27613647-27613864,27614093-27614189,27614605-27614691,
27614892-27615026,27615121-27615225,27615717-27615845,
27615925-27616028,27616598-27616688,27616774-27616857
Length = 527
Score = 161 bits (390), Expect = 7e-40
Identities = 102/199 (51%), Positives = 125/199 (62%), Gaps = 33/199 (16%)
Frame = +3
Query: 219 MLVDDIGDVTVTNDGATILKMLEVEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKN 398
MLVDDIGDVT+TNDGATIL+MLEVEHPAAKVLVELA+LQD EVGDGTTSVVIIAAELLK
Sbjct: 1 MLVDDIGDVTITNDGATILRMLEVEHPAAKVLVELAELQDREVGDGTTSVVIIAAELLKR 60
Query: 399 ADELVKTKIHPTSIISGYR------------------LACKEAVKY----------IQDN 494
++LV+ KIHPTSIISGYR L C + Y +++
Sbjct: 61 GNDLVRNKIHPTSIISGYRLQYNFRFKTNVPAANPHCLTCFTIIYYQLAMREACKYVEEK 120
Query: 495 LTVTVESLGRPSLINTAKTTMSSKLIGAYPLYYK---LSFIEALINRYHREEILQPSQ*Y 665
L V V+ LG+ SLIN AKT+MSSKLI + ++ + ++A+ + E+ P +
Sbjct: 121 LAVKVDKLGKDSLINCAKTSMSSKLINSDSDFFANLVVDAVQAVKTTNAKGEVKYPIKSI 180
Query: 666 N*QKYH--SNNDFGLLNNY 716
N K H S D LLN Y
Sbjct: 181 NILKAHGKSAKDSYLLNGY 199
>03_05_0339 +
23287620-23287676,23287784-23287849,23287937-23288048,
23288240-23288368,23288795-23288866,23289245-23289360,
23289494-23289570,23289788-23290273,23290373-23290688,
23290769-23290915
Length = 525
Score = 137 bits (332), Expect = 8e-33
Identities = 74/169 (43%), Positives = 113/169 (66%), Gaps = 5/169 (2%)
Frame = +3
Query: 129 GDPVRTQNVMXXXXXXNIVKSSLGPVGLDKMLVDDIG---DVTVTNDGATILKMLEVEHP 299
G+ R + ++VK++LGP G+DK+L G VTVTNDGATILK L +++P
Sbjct: 14 GERARMAAFIGAMAIADLVKTTLGPKGMDKIL-QSTGRGRSVTVTNDGATILKSLHIDNP 72
Query: 300 AAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGYRLACKEAVK 479
AAKVLV+++++QD+EVGDGTTSVV++A ELL+ A++LV KIHP +II+GYR+A + A
Sbjct: 73 AAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVNMKIHPMTIIAGYRMAVECARN 132
Query: 480 YIQDNLTVTVESLG--RPSLINTAKTTMSSKLIGAYPLYYKLSFIEALI 620
+ + E++ R L+N A TT+SSK++ Y+ ++A++
Sbjct: 133 ALLERTMDNKENIDKFRSDLMNIAMTTLSSKILSQDKEYFAELAVDAVL 181
>06_03_1193 -
28298656-28298754,28299303-28299377,28299456-28299544,
28299679-28299760,28300385-28300474,28300557-28300655,
28300733-28300852,28300968-28301084,28301174-28301309,
28301415-28301584,28301744-28301947,28302032-28302157,
28302841-28303101,28303215-28303229
Length = 560
Score = 133 bits (322), Expect = 1e-31
Identities = 67/160 (41%), Positives = 107/160 (66%), Gaps = 3/160 (1%)
Frame = +3
Query: 150 NVMXXXXXXNIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLEVEHPAAKVLVELAQ 329
N+ + V+++LGP G+DK++ DD G T++NDGATI+++L++ HPAAK+LV++A+
Sbjct: 28 NINACTVVADTVRTTLGPRGMDKLIHDDKGGTTISNDGATIMRLLDIIHPAAKILVDIAK 87
Query: 330 LQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGYRLACKEAVKYIQDNLT-VT 506
QD EVGDGTT+VV++AAE LK A ++ +HP S+I YR A A++ ++D T +
Sbjct: 88 SQDSEVGDGTTTVVLLAAEFLKEAKPYIEDGVHPHSLIRSYRTAGHLAIEKVKDLATSIE 147
Query: 507 VESL--GRPSLINTAKTTMSSKLIGAYPLYYKLSFIEALI 620
+SL + L A TT+SSKLIG ++ ++A++
Sbjct: 148 GKSLEEKKELLAKCAATTLSSKLIGGEKEFFASMVVDAVL 187
>06_03_0477 -
21250811-21250981,21251261-21251374,21251447-21251613,
21252051-21252153,21252315-21252367,21252438-21252570,
21252835-21253183,21253685-21254003,21254519-21254717
Length = 535
Score = 121 bits (292), Expect = 5e-28
Identities = 62/153 (40%), Positives = 96/153 (62%), Gaps = 1/153 (0%)
Frame = +3
Query: 117 TRSCGDPVRTQNVMXXXXXXNIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLEVEH 296
+R G + N+ I+++SLGP G+DKML GDVT+TNDGATIL+ ++V++
Sbjct: 22 SRLRGLDAQKANIAAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDN 81
Query: 297 PAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGYRLACKEAV 476
AK++VEL+ QD E+GDGTT VV++A LL+ A++L++ IHP I GY LA + A
Sbjct: 82 QIAKLMVELSCSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYELASRIAF 141
Query: 477 KYIQD-NLTVTVESLGRPSLINTAKTTMSSKLI 572
+++ + + L+ T TT+SSK++
Sbjct: 142 DHLEHISHKFEFSATNIEPLVQTCMTTLSSKIV 174
>06_03_0353 +
19810945-19810975,19811308-19811369,19811741-19811813,
19813292-19813359,19813496-19813565,19813908-19813976,
19814065-19814136,19814247-19814320,19814420-19814697,
19814804-19815188,19815268-19815393,19815583-19815687,
19815986-19815994,19817040-19817114,19817202-19817390
Length = 561
Score = 118 bits (285), Expect = 4e-27
Identities = 56/154 (36%), Positives = 94/154 (61%)
Frame = +3
Query: 120 RSCGDPVRTQNVMXXXXXXNIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLEVEHP 299
R G V N+ +I++++LGP + KML+D G + VTNDG IL+ +++ HP
Sbjct: 16 RESGTKVHHANIQAAKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILREIDIAHP 75
Query: 300 AAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGYRLACKEAVK 479
AAK ++EL++ QDEEVGDGTTSV+++A E+L A+ + HPT I Y A ++A+
Sbjct: 76 AAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEAFIDKHYHPTVICRAYTKALEDALA 135
Query: 480 YIQDNLTVTVESLGRPSLINTAKTTMSSKLIGAY 581
+ D + + V+ R +++ K+++ +K G +
Sbjct: 136 -VLDKIAMHVDVNDRAAMLGLVKSSIGTKFTGQF 168
>02_02_0253 -
8325437-8325628,8325705-8325779,8325933-8326037,
8326249-8326374,8326451-8326835,8326931-8327208,
8327294-8327367,8327476-8327547,8327637-8327705,
8340132-8340201,8340806-8340873,8341571-8341643,
8341807-8341868,8342168-8342198
Length = 559
Score = 118 bits (285), Expect = 4e-27
Identities = 57/154 (37%), Positives = 92/154 (59%)
Frame = +3
Query: 120 RSCGDPVRTQNVMXXXXXXNIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLEVEHP 299
R G V N+ +I++++LGP + KML+D G + VTNDG IL+ L++ HP
Sbjct: 16 RESGTKVHHANIQAAKAVADIIRTTLGPQSMLKMLLDAAGGIVVTNDGNCILRELDLAHP 75
Query: 300 AAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGYRLACKEAVK 479
AAK ++EL++ QDEEVGDGTTSV+++A E+L A + HPT I Y A +A+
Sbjct: 76 AAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAQAFIDKNYHPTVICRAYTKALDDALS 135
Query: 480 YIQDNLTVTVESLGRPSLINTAKTTMSSKLIGAY 581
+ D + + V+ R +++ K+++ +K G +
Sbjct: 136 -VLDKIAIPVDVDDRVAMLGLVKSSIGTKFTGQF 168
>05_07_0067 +
27463703-27463705,27464309-27464365,27464779-27464844,
27464985-27465096,27465281-27465409,27466076-27466191,
27466364-27466440,27466678-27467163,27467255-27467570,
27467618-27467797
Length = 513
Score = 115 bits (277), Expect = 3e-26
Identities = 58/113 (51%), Positives = 83/113 (73%), Gaps = 3/113 (2%)
Frame = +3
Query: 117 TRSCGDPVRTQNVMXXXXXXNIVKSSLGPVGLDKMLVDDIG---DVTVTNDGATILKMLE 287
T G+ R + + ++VK++LGP G+DK+L G VTVTNDGATILK L
Sbjct: 11 TEEKGERARMASFVGGMAISDLVKTTLGPKGMDKIL-QSTGRGRSVTVTNDGATILKSLH 69
Query: 288 VEHPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIIS 446
+++PAAKVLV+++++QD+EVGDGTTSVV++A ELL+ A++LV KIHP +II+
Sbjct: 70 IDNPAAKVLVDISKVQDDEVGDGTTSVVVLAGELLREAEKLVNMKIHPMTIIA 122
>02_02_0739 - 13560241-13560622,13561192-13561239,13563727-13564949
Length = 550
Score = 112 bits (269), Expect = 3e-25
Identities = 56/150 (37%), Positives = 87/150 (58%)
Frame = +3
Query: 132 DPVRTQNVMXXXXXXNIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLEVEHPAAKV 311
D VR N+ + V++SLGP G+DKM+ +V +TNDGATIL + + PAA++
Sbjct: 25 DDVRGLNIAAARAVADAVRTSLGPRGMDKMISSGEQEVIITNDGATILSRMSLLQPAARM 84
Query: 312 LVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGYRLACKEAVKYIQD 491
L EL++ QD GDGTT+VV++A LL+ A L+ HPT+ AV+ +
Sbjct: 85 LAELSRSQDAAAGDGTTTVVVLAGSLLRRAQSLLSAGAHPTAAADALHRLATRAVEVLH- 143
Query: 492 NLTVTVESLGRPSLINTAKTTMSSKLIGAY 581
+ + +E R SL+ +A T ++SK++ Y
Sbjct: 144 AMAIPIELSDRDSLVKSASTALNSKVVSQY 173
>03_06_0362 +
33379489-33379624,33380161-33380423,33380524-33380670,
33380753-33380914,33381681-33381758,33382329-33382462,
33382702-33382774,33382852-33382929,33383002-33383124,
33383223-33383317,33383723-33383932,33384115-33384172,
33384268-33384333
Length = 540
Score = 106 bits (254), Expect = 2e-23
Identities = 51/135 (37%), Positives = 86/135 (63%), Gaps = 3/135 (2%)
Frame = +3
Query: 180 IVKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLEVEHPAAKVLVELAQLQDEEVGDGT 359
I ++SLGP G++KM+++ + + VTND ATI+ LEV+HPAAK+LV + Q EE+GDG
Sbjct: 37 ITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHPAAKILVLAGRAQQEEIGDGA 96
Query: 360 TSVVIIAAELLKNADELVKTKIHPTSIISGYRLACKEAVKYIQDNLTVTVESL---GRPS 530
+ A ELL+ A+EL++ +HP+ II GY A + V+ ++D + E++ +
Sbjct: 97 NLTISFAGELLEKAEELIRMGLHPSEIIIGYTKAINKTVEILEDLVEKGSENMDVRNKEE 156
Query: 531 LINTAKTTMSSKLIG 575
++ ++ ++SK G
Sbjct: 157 VVLLMRSAVASKQFG 171
>10_08_0620 - 19321612-19323237
Length = 541
Score = 105 bits (252), Expect = 4e-23
Identities = 57/154 (37%), Positives = 87/154 (56%), Gaps = 4/154 (2%)
Frame = +3
Query: 132 DPVRTQNVMXXXXXXNIVKSSLGPVGLDKMLVDDI--GD--VTVTNDGATILKMLEVEHP 299
D VR N+ ++SLGP G+DKM+ GD V +TNDGATIL + + P
Sbjct: 25 DDVRGLNIAAGRAVAAAARTSLGPRGMDKMISSSSSGGDQAVIITNDGATILSRMPLLQP 84
Query: 300 AAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGYRLACKEAVK 479
AA++L +L++ QD GDGTT+VV++A LL+ A L+ HPT+ L AV+
Sbjct: 85 AARMLADLSRSQDAAAGDGTTTVVVLAGSLLRRAQSLLSAGAHPTAAADALHLLAARAVE 144
Query: 480 YIQDNLTVTVESLGRPSLINTAKTTMSSKLIGAY 581
+ + + VE R +L+ +A T ++SK++ Y
Sbjct: 145 VLH-GMAIPVELSDRDALVKSASTALNSKVVSQY 177
>05_01_0337 -
2658647-2658722,2658797-2658915,2658995-2659102,
2659187-2659255,2659561-2659655,2659740-2659944,
2660125-2660211,2660291-2660405,2660696-2660802,
2661054-2661146,2661243-2661290,2661345-2661544,
2661993-2662128,2662228-2662291,2662779-2662912
Length = 551
Score = 96.7 bits (230), Expect = 2e-20
Identities = 50/158 (31%), Positives = 89/158 (56%), Gaps = 2/158 (1%)
Frame = +3
Query: 150 NVMXXXXXXNIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLEVEHPAAKVLVELAQ 329
N+ +++K++LGP G KMLV GD+ +T DG T+LK +++++P A ++ A
Sbjct: 22 NINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAV 81
Query: 330 LQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGYRLACKEAVKYIQDNLTVTV 509
QD+ GDGTTS V+ EL+K ++ + HP ++ G+ +A + +++++ T V
Sbjct: 82 AQDDTSGDGTTSTVLFIGELMKQSERCIDEGTHPRFLVDGFDVAKRATLEFLEKFKTSVV 141
Query: 510 --ESLGRPSLINTAKTTMSSKLIGAYPLYYKLSFIEAL 617
+ R L A+TT+ +K+ L +KLS + L
Sbjct: 142 MGDEPDREILKMIARTTLRTKVGAVCFLAFKLSLLGQL 179
>02_01_0024 +
159595-159801,159892-160017,160201-160338,160431-160526,
160958-161200,161249-161537,161612-161781,161975-162052,
162156-162227,162345-162449,162555-162647,162737-162829,
163109-163235,163317-163330
Length = 616
Score = 56.8 bits (131), Expect = 2e-08
Identities = 32/108 (29%), Positives = 55/108 (50%), Gaps = 4/108 (3%)
Frame = +3
Query: 177 NIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLEVEHP----AAKVLVELAQLQDEE 344
++V +LGP G + +L G + NDG T+ K +E+E P AK++ + A ++
Sbjct: 77 DLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDL 136
Query: 345 VGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGYRLACKEAVKYIQ 488
GDGTT+ V++A ++ ++V +P I G K V +Q
Sbjct: 137 AGDGTTTSVVLAQGMITEGVKVVAAGANPVQITRGIEKTAKALVSELQ 184
>06_01_0097 -
810283-810296,810398-810521,810974-811066,811144-811236,
811410-811514,811661-811732,811857-811934,812210-812379,
812507-812741,812832-813074,813243-813338,813445-813582,
814014-814139,814235-814453
Length = 601
Score = 55.2 bits (127), Expect = 5e-08
Identities = 31/108 (28%), Positives = 56/108 (51%), Gaps = 4/108 (3%)
Frame = +3
Query: 177 NIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLEVEHPA----AKVLVELAQLQDEE 344
++V +LGP G + +L G + NDG T+ + +E+E P AK++ + A ++
Sbjct: 81 DLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVELEDPVENIGAKLVRQAAAKTNDL 140
Query: 345 VGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGYRLACKEAVKYIQ 488
GDGTT+ V++A L+ ++V +P I G K V+ ++
Sbjct: 141 AGDGTTTSVVLAQGLIAEGVKVVAAGANPVQITRGIEKTAKALVEELK 188
>12_01_1011 +
10292709-10292765,10293003-10293156,10294062-10294183,
10294288-10294495,10294644-10294789,10294920-10295226,
10295666-10296117,10296388-10296678
Length = 578
Score = 53.2 bits (122), Expect = 2e-07
Identities = 32/95 (33%), Positives = 53/95 (55%), Gaps = 4/95 (4%)
Frame = +3
Query: 177 NIVKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLEV----EHPAAKVLVELAQLQDEE 344
N V +LGP G + +L D+ G V NDG TI + +E+ E+ A ++ E+A ++
Sbjct: 61 NAVGVTLGPRGRNVVL-DEYGSPKVVNDGVTIARAIELYDPMENAGAALIREVASKTNDS 119
Query: 345 VGDGTTSVVIIAAELLKNADELVKTKIHPTSIISG 449
GDGTT+ ++A E++K V + +P S+ G
Sbjct: 120 AGDGTTTASVLAREIIKLGLLSVTSGANPVSLKKG 154
>03_06_0760 -
36067752-36068045,36068260-36068711,36069263-36069569,
36069719-36069864,36069989-36070196,36070339-36070460,
36070621-36070789,36070875-36070931
Length = 584
Score = 52.8 bits (121), Expect = 3e-07
Identities = 32/93 (34%), Positives = 51/93 (54%), Gaps = 4/93 (4%)
Frame = +3
Query: 183 VKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLEVEHP----AAKVLVELAQLQDEEVG 350
V +LGP G + +L D+ G V NDG TI + +E+ P A ++ E+A ++ G
Sbjct: 68 VAVTLGPRGRNVVL-DEFGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAG 126
Query: 351 DGTTSVVIIAAELLKNADELVKTKIHPTSIISG 449
DGTT+ ++A E++K V + +P SI G
Sbjct: 127 DGTTTASVLAREIIKLGLLSVTSGANPVSIKKG 159
>09_06_0292 +
22075647-22075691,22077394-22077507,22077602-22077841,
22077926-22078003,22078094-22078162,22078420-22078545,
22079108-22079188,22079272-22079460,22079597-22080434,
22082290-22082411,22082482-22082701,22082910-22083055,
22083260-22083566,22083886-22084136,22084294-22084533,
22084930-22085238
Length = 1124
Score = 46.0 bits (104), Expect = 3e-05
Identities = 34/94 (36%), Positives = 48/94 (51%), Gaps = 9/94 (9%)
Frame = +3
Query: 222 LVDDIGDVT-VTNDGATILKMLE----VEHPAAKVLVE----LAQLQDEEVGDGTTSVVI 374
+V D DV V NDG TI K +E VEH A +L E +A + VGDGTT+ +I
Sbjct: 597 VVIDQDDVPKVINDGITIAKAIELPNAVEHAGAMLLQEHVNQIASKTNSSVGDGTTTAII 656
Query: 375 IAAELLKNADELVKTKIHPTSIISGYRLACKEAV 476
+A E++ V T +P ++ G A E +
Sbjct: 657 LAREIINLGLLAVATGANPVALRKGIDKAVHELI 690
>03_01_0305 -
2383187-2383298,2383606-2383684,2383762-2383867,
2383941-2384044,2384141-2384240,2384533-2384628,
2384724-2384801,2385355-2385423,2385511-2385591,
2385670-2385759,2385859-2385945,2386022-2386126,
2386591-2386686,2386796-2386971,2387225-2387384,
2387898-2388029,2388236-2388260,2389023-2389174
Length = 615
Score = 46.0 bits (104), Expect = 3e-05
Identities = 26/102 (25%), Positives = 48/102 (47%), Gaps = 4/102 (3%)
Frame = +3
Query: 183 VKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLE----VEHPAAKVLVELAQLQDEEVG 350
VK ++GP G ++ G VT DG T+ K +E V++ A ++ ++A ++ G
Sbjct: 96 VKVTMGPKGRTVVIEQSFGAPKVTKDGVTVAKSIEFSNRVKNVGASLVKQVANATNDTAG 155
Query: 351 DGTTSVVIIAAELLKNADELVKTKIHPTSIISGYRLACKEAV 476
DGTT ++ + + V ++ + G +A E V
Sbjct: 156 DGTTCATVLTKAIFAEGCKSVAAGMNAMDLRRGISMAVDEVV 197
>05_06_0240 -
26629218-26629323,26629412-26629490,26629656-26629761,
26629844-26629947,26630069-26630168,26630256-26630351,
26630464-26630541,26630603-26630671,26630766-26630846,
26630879-26630935,26631016-26631105,26631192-26631278,
26631690-26631794,26631899-26631994,26632222-26632397,
26632847-26633006,26633151-26633600
Length = 679
Score = 42.3 bits (95), Expect = 4e-04
Identities = 25/106 (23%), Positives = 50/106 (47%), Gaps = 4/106 (3%)
Frame = +3
Query: 183 VKSSLGPVGLDKMLVDDIGDVTVTNDGATILKMLEVEHPA----AKVLVELAQLQDEEVG 350
VK ++GP G + ++ VT DG T+ K +E E A A ++ ++A+ ++ G
Sbjct: 143 VKVTMGPKGRNVIIERSHRAPKVTKDGVTVAKSIEFEDSAKNVGANLVKQVAEATNKVAG 202
Query: 351 DGTTSVVIIAAELLKNADELVKTKIHPTSIISGYRLACKEAVKYIQ 488
DGTT ++ +L + V ++ + +G A +++
Sbjct: 203 DGTTCATVLTQAILTEGCKAVAAGVNVMDLRNGINKAISSITTHLK 248
>10_08_0289 +
16534063-16534100,16534219-16534243,16534847-16534978,
16535255-16535441,16536014-16536189,16536282-16536377,
16536511-16536615,16536654-16536683,16536698-16536784,
16536874-16536963,16537033-16537113,16537200-16537268,
16537413-16537490,16537578-16537673,16537981-16538080,
16538208-16538311,16538396-16538501,16538595-16538673,
16538861-16538963
Length = 593
Score = 36.3 bits (80), Expect = 0.026
Identities = 21/94 (22%), Positives = 42/94 (44%), Gaps = 4/94 (4%)
Frame = +3
Query: 207 GLDKMLVDDIGDVTVTNDGATILKMLE----VEHPAAKVLVELAQLQDEEVGDGTTSVVI 374
G + ++ G VT DG T+ K +E V++ A ++ ++A ++ GDGTT +
Sbjct: 75 GRNVVIEQSYGSPKVTKDGVTVAKSIEFKDRVKNVGASLVKQVANATNDTAGDGTTCATV 134
Query: 375 IAAELLKNADELVKTKIHPTSIISGYRLACKEAV 476
+ + + V ++ + G +A V
Sbjct: 135 LTKAIFTEGCKSVAAGMNAMDLRRGISMAVDAVV 168
>07_03_1624 + 28204892-28205024,28205160-28205242,28205305-28205376,
28205889-28205946,28206554-28206603,28207805-28207873,
28208183-28208317,28208410-28208581,28208663-28208754,
28208837-28209244,28209783-28210704,28211592-28211831,
28211898-28212229,28212460-28212608,28213265-28213841,
28214078-28214224,28214693-28214968,28215296-28215403,
28215634-28215839,28216079-28216217,28216329-28216982,
28218040-28218099,28218234-28218388,28218414-28218636,
28218729-28218773
Length = 1834
Score = 32.3 bits (70), Expect = 0.42
Identities = 22/94 (23%), Positives = 45/94 (47%)
Frame = +3
Query: 294 HPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLKNADELVKTKIHPTSIISGYRLACKEA 473
H ++++ L +L EV S+ +A E+L+ LV TKI +G
Sbjct: 1085 HVDGRIILNLWRLMRAEVKLNNYSLEAVANEVLRRKVPLVPTKILNRWFATGSGRGRYRC 1144
Query: 474 VKYIQDNLTVTVESLGRPSLINTAKTTMSSKLIG 575
++Y+ ++ +E L + L+N +T+ +++ G
Sbjct: 1145 IEYVNKRSSLNLEILNQLDLVN--RTSELARVFG 1176
>07_03_1677 +
28596243-28596320,28596803-28596931,28597040-28597210,
28597491-28597583
Length = 156
Score = 30.3 bits (65), Expect = 1.7
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = +3
Query: 357 TTSVVIIAAELLKNADELVKTKIHPTSIISGYRLACKEAVKYIQDNL-TVTVESLGRPSL 533
T S + ++ +A E +K ++ + +AC EA Q+++ TVTVE+LG L
Sbjct: 22 THSHALSNTSIITDASEYIK-ELKQKVVRLNKEIACAEAAALRQNSIPTVTVETLGHGFL 80
Query: 534 IN 539
IN
Sbjct: 81 IN 82
>04_01_0006 - 112476-114182,114627-114676,115289-115463
Length = 643
Score = 29.9 bits (64), Expect = 2.2
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = -2
Query: 149 LCSHWVSAGSCPCYRQRCSYSRHFLLYF*HKIHFKIAVTLFC 24
+CSH V G+ + CS+S HF H A L C
Sbjct: 80 VCSHGVKTGAAAVFTAECSHSFHFPCIAAHAHALAAATALSC 121
>07_03_1649 - 28385289-28385358,28387039-28387877
Length = 302
Score = 28.7 bits (61), Expect = 5.2
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = +3
Query: 222 LVDDIGDVTVTNDGATILKMLEVEHPAAKVLVELAQLQDEEVGDGTTSV 368
L+ D GDV+ ++ +++ L+ + P + VLV D + GTTS+
Sbjct: 244 LLVDSGDVSAGSEADGVMRWLDGQEPGSVVLVSFG--SDSKTKKGTTSM 290
>03_03_0113 +
14550435-14550822,14550831-14551660,14552105-14552278,
14552350-14552517
Length = 519
Score = 28.3 bits (60), Expect = 6.9
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +3
Query: 378 AAELLKNADELVKTKIHPTSIISGYRLACK 467
AAEL + E + +++ P SI++G R ACK
Sbjct: 6 AAELPDDIVEKIISRLPPRSIVTGCRAACK 35
>03_05_0717 +
27097367-27097621,27097744-27097866,27098136-27098303,
27098393-27100072
Length = 741
Score = 27.9 bits (59), Expect = 9.1
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +3
Query: 15 LPETKKRDGDFKVNFVLKIQ*KMSTIAAPLSVAGTRSCG 131
LP T+KR G F V + K+S++ + L+ G+ CG
Sbjct: 408 LPHTEKRSGLFNVEQRFFLYHKLSSLISNLNKLGSLICG 446
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,752,958
Number of Sequences: 37544
Number of extensions: 346487
Number of successful extensions: 727
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 702
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 717
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1980691104
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -