Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc28l11
         (698 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF543192-1|AAN40409.1|  636|Anopheles gambiae amino acid transpo...    23   7.0  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            23   9.2  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    23   9.2  
AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeot...    23   9.2  
AF046924-1|AAC08530.1|  122|Anopheles gambiae mucin protein.           23   9.2  

>AF543192-1|AAN40409.1|  636|Anopheles gambiae amino acid
           transporter Ag_AAT8 protein.
          Length = 636

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 7/17 (41%), Positives = 9/17 (52%)
 Frame = -3

Query: 615 GWCLLGLGQPQTEVWNA 565
           GWC+   G  Q  +W A
Sbjct: 577 GWCIFAFGLLQLPIWAA 593


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = -1

Query: 569  THLRELLLLSLNITLKVIRVHSVINVE 489
            TH  +   LS NIT+K    H+ I+V+
Sbjct: 1441 THTADGSKLSFNITIKPSESHTSIDVD 1467


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
            differentiation regulator protein.
          Length = 1283

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 12/39 (30%), Positives = 21/39 (53%)
 Frame = -2

Query: 448  TTSAPSPFTVKPSTSAGRDLTFCALRSATISSVRNSTSS 332
            T   P P     ++SAG   T  ++ S  ++S+ +S+SS
Sbjct: 937  TQQQPLPPAPAAASSAGVQPTEHSVNSTNVTSINSSSSS 975


>AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeotic
           protein protein.
          Length = 308

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 15/51 (29%), Positives = 23/51 (45%)
 Frame = +3

Query: 144 ANLSGLVSRTQTAVKRDFTRGIWHMSCSRRLDGTLASTSLLHNHSNTCSCG 296
           + LS  V   Q+ +  D TR  W ++ S+      AST  + N  +   CG
Sbjct: 79  SQLSSSVGGAQSGLP-DITRHPWLVTASQSALQKFASTDWMSNPFDRVVCG 128


>AF046924-1|AAC08530.1|  122|Anopheles gambiae mucin protein.
          Length = 122

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 13/45 (28%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
 Frame = -2

Query: 448 TTSAPSPFTVKPSTSAGRDLTFCALRSATISSV---RNSTSSLSP 323
           TT AP+  TV P+T+     T   +   T ++V   + +T++++P
Sbjct: 27  TTVAPATTTVAPTTTTVAPTTTTTVAPTTTTTVAPGQTTTTTVAP 71


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 688,355
Number of Sequences: 2352
Number of extensions: 13232
Number of successful extensions: 72
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 72
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 72
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)