Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc28l07
         (433 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            25   1.5  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            25   1.5  
AJ416109-1|CAC94781.1|  234|Anopheles gambiae PROSAg25 protein p...    24   2.0  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    23   6.1  
AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         23   6.1  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    22   8.1  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    22   8.1  
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    22   8.1  
AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless male-spe...    22   8.1  
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    22   8.1  

>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 24.6 bits (51), Expect = 1.5
 Identities = 8/27 (29%), Positives = 17/27 (62%)
 Frame = -3

Query: 287  CAPEVLYSAIVMFVVGWMYVEGLITST 207
            C  +V++ ++   + GW YVE ++ +T
Sbjct: 1408 CNGKVVHGSVGFSIGGWSYVEVMVDNT 1434


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 24.6 bits (51), Expect = 1.5
 Identities = 8/27 (29%), Positives = 17/27 (62%)
 Frame = -3

Query: 287  CAPEVLYSAIVMFVVGWMYVEGLITST 207
            C  +V++ ++   + GW YVE ++ +T
Sbjct: 1409 CNGKVVHGSVGFSIGGWSYVEVMVDNT 1435


>AJ416109-1|CAC94781.1|  234|Anopheles gambiae PROSAg25 protein
           protein.
          Length = 234

 Score = 24.2 bits (50), Expect = 2.0
 Identities = 9/32 (28%), Positives = 16/32 (50%)
 Frame = +1

Query: 223 PSTYIQPTTNITIAEYNTSGAQRPYSVLYIMC 318
           P++ +       + EY  SG  RP+ V  ++C
Sbjct: 106 PTSQLVQKVATVMQEYTQSGGVRPFGVSLLIC 137


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskeletal
            structural protein protein.
          Length = 1645

 Score = 22.6 bits (46), Expect = 6.1
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = +1

Query: 184  ETLELISQVDVIKPSTYIQPTTNITIAEYNTSGAQRPYS 300
            + +E+  +   I  +TY++PT      E  +S  Q+P S
Sbjct: 1418 QEMEIFEETKPILTTTYLKPTLAALQNEAKSSYQQQPDS 1456


>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 22.6 bits (46), Expect = 6.1
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +1

Query: 1   DTAARVTYRSVCYKYNL 51
           D A R  YR+V  KYN+
Sbjct: 615 DVACRGDYRAVATKYNI 631


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 22.2 bits (45), Expect = 8.1
 Identities = 9/36 (25%), Positives = 19/36 (52%)
 Frame = -3

Query: 152 SNRNELLLHGRNRQSSSNYLPVRTRKTFYHQ*LHKL 45
           +N N  +    N  +S ++ P+R ++   H+ L +L
Sbjct: 209 NNNNNTISSNNNNNNSLHHGPLRDKELTEHEQLERL 244


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 22.2 bits (45), Expect = 8.1
 Identities = 9/36 (25%), Positives = 19/36 (52%)
 Frame = -3

Query: 152 SNRNELLLHGRNRQSSSNYLPVRTRKTFYHQ*LHKL 45
           +N N  +    N  +S ++ P+R ++   H+ L +L
Sbjct: 209 NNNNNTISSNNNNNNSLHHGPLRDKELTEHEQLERL 244


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 22.2 bits (45), Expect = 8.1
 Identities = 9/36 (25%), Positives = 19/36 (52%)
 Frame = -3

Query: 152 SNRNELLLHGRNRQSSSNYLPVRTRKTFYHQ*LHKL 45
           +N N  +    N  +S ++ P+R ++   H+ L +L
Sbjct: 161 NNNNNTISSNNNNNNSLHHGPLRDKELTEHEQLERL 196


>AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless
           male-specific zinc-fingerC isoform protein.
          Length = 569

 Score = 22.2 bits (45), Expect = 8.1
 Identities = 9/36 (25%), Positives = 19/36 (52%)
 Frame = -3

Query: 152 SNRNELLLHGRNRQSSSNYLPVRTRKTFYHQ*LHKL 45
           +N N  +    N  +S ++ P+R ++   H+ L +L
Sbjct: 209 NNNNNTISSNNNNNNSLHHGPLRDKELTEHEQLERL 244


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1222

 Score = 22.2 bits (45), Expect = 8.1
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = +3

Query: 258 NSRVQHFWRTKAVFCTIHHVYL 323
           N+  +H WR  +++   +HVY+
Sbjct: 185 NTIPEHRWRIISIYSYSNHVYI 206


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 413,128
Number of Sequences: 2352
Number of extensions: 7280
Number of successful extensions: 17
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 35717724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)