Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc28l07
         (433 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC075810-1|AAH75810.1|  298|Homo sapiens chromosome 6 open readi...    31   2.2  
BC010184-1|AAH10184.1|  298|Homo sapiens chromosome 6 open readi...    31   2.2  
BC002328-1|AAH02328.1|  298|Homo sapiens chromosome 6 open readi...    31   2.2  
AL451165-2|CAH70507.1|  298|Homo sapiens RP3-391O22.4 protein.         31   2.2  
AL031577-4|CAI20395.1|  224|Homo sapiens RP3-391O22.4 protein.         31   2.2  
AL031577-3|CAI20393.1|  298|Homo sapiens RP3-391O22.4 protein.         31   2.2  

>BC075810-1|AAH75810.1|  298|Homo sapiens chromosome 6 open reading
           frame 106 protein.
          Length = 298

 Score = 30.7 bits (66), Expect = 2.2
 Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
 Frame = -3

Query: 311 MYSTEYGLCAPEVLYSAIVMFVVGWMYVEGLITST*DMSSKVSVFT*Q-RLPYPSNRNEL 135
           MY  ++ +C    LY   V++V+  + V GL+  T  +SS  + F  Q       N N  
Sbjct: 154 MYQGQWRMCTATGLYYGDVIWVILSVEVGGLLGVTQQLSSFETEFNTQPHRKVEGNFNPF 213

Query: 134 LLHGRNRQSSSNYL 93
               +NRQS  N L
Sbjct: 214 ASPQKNRQSDENNL 227


>BC010184-1|AAH10184.1|  298|Homo sapiens chromosome 6 open reading
           frame 106 protein.
          Length = 298

 Score = 30.7 bits (66), Expect = 2.2
 Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
 Frame = -3

Query: 311 MYSTEYGLCAPEVLYSAIVMFVVGWMYVEGLITST*DMSSKVSVFT*Q-RLPYPSNRNEL 135
           MY  ++ +C    LY   V++V+  + V GL+  T  +SS  + F  Q       N N  
Sbjct: 154 MYQGQWRMCTATGLYYGDVIWVILSVEVGGLLGVTQQLSSFETEFNTQPHRKVEGNFNPF 213

Query: 134 LLHGRNRQSSSNYL 93
               +NRQS  N L
Sbjct: 214 ASPQKNRQSDENNL 227


>BC002328-1|AAH02328.1|  298|Homo sapiens chromosome 6 open reading
           frame 106 protein.
          Length = 298

 Score = 30.7 bits (66), Expect = 2.2
 Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
 Frame = -3

Query: 311 MYSTEYGLCAPEVLYSAIVMFVVGWMYVEGLITST*DMSSKVSVFT*Q-RLPYPSNRNEL 135
           MY  ++ +C    LY   V++V+  + V GL+  T  +SS  + F  Q       N N  
Sbjct: 154 MYQGQWRMCTATGLYYGDVIWVILSVEVGGLLGVTQQLSSFETEFNTQPHRKVEGNFNPF 213

Query: 134 LLHGRNRQSSSNYL 93
               +NRQS  N L
Sbjct: 214 ASPQKNRQSDENNL 227


>AL451165-2|CAH70507.1|  298|Homo sapiens RP3-391O22.4 protein.
          Length = 298

 Score = 30.7 bits (66), Expect = 2.2
 Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
 Frame = -3

Query: 311 MYSTEYGLCAPEVLYSAIVMFVVGWMYVEGLITST*DMSSKVSVFT*Q-RLPYPSNRNEL 135
           MY  ++ +C    LY   V++V+  + V GL+  T  +SS  + F  Q       N N  
Sbjct: 154 MYQGQWRMCTATGLYYGDVIWVILSVEVGGLLGVTQQLSSFETEFNTQPHRKVEGNFNPF 213

Query: 134 LLHGRNRQSSSNYL 93
               +NRQS  N L
Sbjct: 214 ASPQKNRQSDENNL 227


>AL031577-4|CAI20395.1|  224|Homo sapiens RP3-391O22.4 protein.
          Length = 224

 Score = 30.7 bits (66), Expect = 2.2
 Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
 Frame = -3

Query: 311 MYSTEYGLCAPEVLYSAIVMFVVGWMYVEGLITST*DMSSKVSVFT*Q-RLPYPSNRNEL 135
           MY  ++ +C    LY   V++V+  + V GL+  T  +SS  + F  Q       N N  
Sbjct: 80  MYQGQWRMCTATGLYYGDVIWVILSVEVGGLLGVTQQLSSFETEFNTQPHRKVEGNFNPF 139

Query: 134 LLHGRNRQSSSNYL 93
               +NRQS  N L
Sbjct: 140 ASPQKNRQSDENNL 153


>AL031577-3|CAI20393.1|  298|Homo sapiens RP3-391O22.4 protein.
          Length = 298

 Score = 30.7 bits (66), Expect = 2.2
 Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
 Frame = -3

Query: 311 MYSTEYGLCAPEVLYSAIVMFVVGWMYVEGLITST*DMSSKVSVFT*Q-RLPYPSNRNEL 135
           MY  ++ +C    LY   V++V+  + V GL+  T  +SS  + F  Q       N N  
Sbjct: 154 MYQGQWRMCTATGLYYGDVIWVILSVEVGGLLGVTQQLSSFETEFNTQPHRKVEGNFNPF 213

Query: 134 LLHGRNRQSSSNYL 93
               +NRQS  N L
Sbjct: 214 ASPQKNRQSDENNL 227


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,766,291
Number of Sequences: 237096
Number of extensions: 939067
Number of successful extensions: 5309
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 5287
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5309
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3430805640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)