Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc28l07
         (433 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF298215-1|AAG30223.1| 2130|Drosophila melanogaster DNA polymera...    29   2.7  
AE014134-331|AAF51313.1| 1292|Drosophila melanogaster CG15378-PA...    28   4.7  

>AF298215-1|AAG30223.1| 2130|Drosophila melanogaster DNA polymerase
            zeta catalyticsubunit protein.
          Length = 2130

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 15/30 (50%), Positives = 19/30 (63%)
 Frame = -1

Query: 196  VLRFQFLHNSGCPILLIETNYCFTAEIGRV 107
            VL FQ LH    P ++I  NYCF+  +GRV
Sbjct: 1604 VLDFQSLH----PSMIIAYNYCFSTCLGRV 1629


>AE014134-331|AAF51313.1| 1292|Drosophila melanogaster CG15378-PA
            protein.
          Length = 1292

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = -1

Query: 121  EIGRVVVITYPCGLARRSTTSNYTNYICSKPTGTSLS 11
            E+G V VIT   G+ + + T     ++CSK  G  LS
Sbjct: 1066 ELGNVEVITCQAGVRQPNQTDCTRYFVCSKKDGKVLS 1102


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,031,826
Number of Sequences: 53049
Number of extensions: 310194
Number of successful extensions: 719
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 690
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 719
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1355285490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)