Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc28l03
         (538 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT007328-1|AAP35992.1|  596|Homo sapiens LIM protein (similar to...    31   3.4  
BC008741-1|AAH08741.1|  596|Homo sapiens PDLIM5 protein protein.       31   3.4  
AY598328-1|AAT06739.1|  596|Homo sapiens L9 protein.                   31   3.4  
AF061258-1|AAC15767.1|  596|Homo sapiens LIM protein protein.          31   3.4  
AB209531-1|BAD92768.1|  436|Homo sapiens Enigma homolog protein.       31   3.4  

>BT007328-1|AAP35992.1|  596|Homo sapiens LIM protein (similar to
           rat protein kinase C-binding enigma) protein.
          Length = 596

 Score = 30.7 bits (66), Expect = 3.4
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = -1

Query: 241 LYCLLYLKTRFDPFCNRVTRNVISSIILSLKMNRXRHCF 125
           LYC L  +  F P C R  R ++  +I +LK      CF
Sbjct: 465 LYCELCYEKFFAPECGRCQRKILGEVINALKQTWHVSCF 503


>BC008741-1|AAH08741.1|  596|Homo sapiens PDLIM5 protein protein.
          Length = 596

 Score = 30.7 bits (66), Expect = 3.4
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = -1

Query: 241 LYCLLYLKTRFDPFCNRVTRNVISSIILSLKMNRXRHCF 125
           LYC L  +  F P C R  R ++  +I +LK      CF
Sbjct: 465 LYCELCYEKFFAPECGRCQRKILGEVINALKQTWHVSCF 503


>AY598328-1|AAT06739.1|  596|Homo sapiens L9 protein.
          Length = 596

 Score = 30.7 bits (66), Expect = 3.4
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = -1

Query: 241 LYCLLYLKTRFDPFCNRVTRNVISSIILSLKMNRXRHCF 125
           LYC L  +  F P C R  R ++  +I +LK      CF
Sbjct: 465 LYCELCYEKFFAPECGRCQRKILGEVINALKQTWHVSCF 503


>AF061258-1|AAC15767.1|  596|Homo sapiens LIM protein protein.
          Length = 596

 Score = 30.7 bits (66), Expect = 3.4
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = -1

Query: 241 LYCLLYLKTRFDPFCNRVTRNVISSIILSLKMNRXRHCF 125
           LYC L  +  F P C R  R ++  +I +LK      CF
Sbjct: 465 LYCELCYEKFFAPECGRCQRKILGEVINALKQTWHVSCF 503


>AB209531-1|BAD92768.1|  436|Homo sapiens Enigma homolog protein.
          Length = 436

 Score = 30.7 bits (66), Expect = 3.4
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = -1

Query: 241 LYCLLYLKTRFDPFCNRVTRNVISSIILSLKMNRXRHCF 125
           LYC L  +  F P C R  R ++  +I +LK      CF
Sbjct: 305 LYCELCYEKFFAPECGRCQRKILGEVINALKQTWHVSCF 343


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 53,174,226
Number of Sequences: 237096
Number of extensions: 810127
Number of successful extensions: 694
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 690
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 694
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5273648886
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)