Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc28k10
(688 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M37197-1|AAA51924.1| 998|Homo sapiens CCAAT-box-binding factor ... 84 4e-16
BC034475-1|AAH34475.1| 1054|Homo sapiens CCAAT/enhancer binding ... 84 4e-16
AC007390-3|AAY14815.1| 1054|Homo sapiens unknown protein. 84 4e-16
BC002932-1|AAH02932.1| 850|Homo sapiens CEP110 protein protein. 30 6.7
AY651261-1|AAX35689.1| 1244|Homo sapiens centrosomal protein 1 p... 30 6.7
AY358109-1|AAQ88476.1| 115|Homo sapiens ACAH3104 protein. 30 6.7
AL137068-5|CAI12358.1| 1773|Homo sapiens centrosomal protein 110... 30 6.7
AL137068-4|CAI12357.1| 994|Homo sapiens centrosomal protein 110... 30 6.7
AL137068-3|CAI12356.1| 828|Homo sapiens centrosomal protein 110... 30 6.7
AL137068-2|CAM13285.1| 2325|Homo sapiens centrosomal protein 110... 30 6.7
AK128098-1|BAC87273.1| 1185|Homo sapiens protein ( Homo sapiens ... 30 6.7
AK074079-1|BAB84905.1| 1793|Homo sapiens FLJ00150 protein protein. 30 6.7
AF513978-1|AAP43846.1| 2325|Homo sapiens CENTRIOLIN protein. 30 6.7
>M37197-1|AAA51924.1| 998|Homo sapiens CCAAT-box-binding factor
protein.
Length = 998
Score = 84.2 bits (199), Expect = 4e-16
Identities = 37/89 (41%), Positives = 54/89 (60%)
Frame = +1
Query: 415 ILIQHPLGHLDEMTSGNKQTKRNTLKLWYYEDQLKELYGTYVDALNKFAHDTVDANKEKS 594
I Q P L++++SGNK ++ L LWY+E QLK L +V L +HDT+ K ++
Sbjct: 306 IFSQRPFDKLEQLSSGNKDSRDRRLILWYFEHQLKHLVAEFVQVLETLSHDTLVTTKTRA 365
Query: 595 VSAMSYLLMHHPEREKILLTNIINKLGDP 681
++ LL + PE EK LL ++NKLGDP
Sbjct: 366 LTVAHELLCNKPEEEKALLVQVVNKLGDP 394
Score = 38.3 bits (85), Expect = 0.025
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = +1
Query: 316 YETKTNRSGSSDHQWAKTLLNKGAIGDRVAAATILIQHPLGH 441
+++KTN + W K +++ G +GDR+AA +LIQ H
Sbjct: 220 FKSKTNSQKGASSTWMKAIVSSGTLGDRMAAMILLIQDDAVH 261
>BC034475-1|AAH34475.1| 1054|Homo sapiens CCAAT/enhancer binding
protein zeta protein.
Length = 1054
Score = 84.2 bits (199), Expect = 4e-16
Identities = 37/89 (41%), Positives = 54/89 (60%)
Frame = +1
Query: 415 ILIQHPLGHLDEMTSGNKQTKRNTLKLWYYEDQLKELYGTYVDALNKFAHDTVDANKEKS 594
I Q P L++++SGNK ++ L LWY+E QLK L +V L +HDT+ K ++
Sbjct: 306 IFSQRPFDKLEQLSSGNKDSRDRRLILWYFEHQLKHLVAEFVQVLETLSHDTLVTTKTRA 365
Query: 595 VSAMSYLLMHHPEREKILLTNIINKLGDP 681
++ LL + PE EK LL ++NKLGDP
Sbjct: 366 LTVAHELLCNKPEEEKALLVQVVNKLGDP 394
Score = 38.3 bits (85), Expect = 0.025
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = +1
Query: 316 YETKTNRSGSSDHQWAKTLLNKGAIGDRVAAATILIQHPLGH 441
+++KTN + W K +++ G +GDR+AA +LIQ H
Sbjct: 220 FKSKTNSQKGASSTWMKAIVSSGTLGDRMAAMILLIQDDAVH 261
>AC007390-3|AAY14815.1| 1054|Homo sapiens unknown protein.
Length = 1054
Score = 84.2 bits (199), Expect = 4e-16
Identities = 37/89 (41%), Positives = 54/89 (60%)
Frame = +1
Query: 415 ILIQHPLGHLDEMTSGNKQTKRNTLKLWYYEDQLKELYGTYVDALNKFAHDTVDANKEKS 594
I Q P L++++SGNK ++ L LWY+E QLK L +V L +HDT+ K ++
Sbjct: 306 IFSQRPFDKLEQLSSGNKDSRDRRLILWYFEHQLKHLVAEFVQVLETLSHDTLVTTKTRA 365
Query: 595 VSAMSYLLMHHPEREKILLTNIINKLGDP 681
++ LL + PE EK LL ++NKLGDP
Sbjct: 366 LTVAHELLCNKPEEEKALLVQVVNKLGDP 394
Score = 38.3 bits (85), Expect = 0.025
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = +1
Query: 316 YETKTNRSGSSDHQWAKTLLNKGAIGDRVAAATILIQHPLGH 441
+++KTN + W K +++ G +GDR+AA +LIQ H
Sbjct: 220 FKSKTNSQKGASSTWMKAIVSSGTLGDRMAAMILLIQDDAVH 261
>BC002932-1|AAH02932.1| 850|Homo sapiens CEP110 protein protein.
Length = 850
Score = 30.3 bits (65), Expect = 6.7
Identities = 19/68 (27%), Positives = 34/68 (50%)
Frame = +1
Query: 475 KRNTLKLWYYEDQLKELYGTYVDALNKFAHDTVDANKEKSVSAMSYLLMHHPEREKILLT 654
K T +L +DQLK L+GT + + A + +A + +A + + E E LL
Sbjct: 321 KLATAELTIAKDQLKSLHGTVMKINQERAEELQEAERFSRKAAQAARDLTRAEAEIELLQ 380
Query: 655 NIINKLGD 678
N++ + G+
Sbjct: 381 NLLRQKGE 388
>AY651261-1|AAX35689.1| 1244|Homo sapiens centrosomal protein 1
protein.
Length = 1244
Score = 30.3 bits (65), Expect = 6.7
Identities = 19/68 (27%), Positives = 34/68 (50%)
Frame = +1
Query: 475 KRNTLKLWYYEDQLKELYGTYVDALNKFAHDTVDANKEKSVSAMSYLLMHHPEREKILLT 654
K T +L +DQLK L+GT + + A + +A + +A + + E E LL
Sbjct: 555 KLATAELTIAKDQLKSLHGTVMKINQERAEELQEAERFSRKAAQAARDLTRAEAEIELLQ 614
Query: 655 NIINKLGD 678
N++ + G+
Sbjct: 615 NLLRQKGE 622
>AY358109-1|AAQ88476.1| 115|Homo sapiens ACAH3104 protein.
Length = 115
Score = 30.3 bits (65), Expect = 6.7
Identities = 12/34 (35%), Positives = 23/34 (67%)
Frame = -2
Query: 159 CDTLAFLIICVLISLTVISVSLIN*YVFLKSFML 58
CDTLAF ++ +L S ++++ S + + L +F+L
Sbjct: 74 CDTLAFSLLLILYSFSILNTSTHSEMLLLPAFLL 107
>AL137068-5|CAI12358.1| 1773|Homo sapiens centrosomal protein 110kDa
protein.
Length = 1773
Score = 30.3 bits (65), Expect = 6.7
Identities = 19/68 (27%), Positives = 34/68 (50%)
Frame = +1
Query: 475 KRNTLKLWYYEDQLKELYGTYVDALNKFAHDTVDANKEKSVSAMSYLLMHHPEREKILLT 654
K T +L +DQLK L+GT + + A + +A + +A + + E E LL
Sbjct: 436 KLATAELTIAKDQLKSLHGTVMKINQERAEELQEAERFSRKAAQAARDLTRAEAEIELLQ 495
Query: 655 NIINKLGD 678
N++ + G+
Sbjct: 496 NLLRQKGE 503
>AL137068-4|CAI12357.1| 994|Homo sapiens centrosomal protein 110kDa
protein.
Length = 994
Score = 30.3 bits (65), Expect = 6.7
Identities = 19/68 (27%), Positives = 34/68 (50%)
Frame = +1
Query: 475 KRNTLKLWYYEDQLKELYGTYVDALNKFAHDTVDANKEKSVSAMSYLLMHHPEREKILLT 654
K T +L +DQLK L+GT + + A + +A + +A + + E E LL
Sbjct: 436 KLATAELTIAKDQLKSLHGTVMKINQERAEELQEAERFSRKAAQAARDLTRAEAEIELLQ 495
Query: 655 NIINKLGD 678
N++ + G+
Sbjct: 496 NLLRQKGE 503
>AL137068-3|CAI12356.1| 828|Homo sapiens centrosomal protein 110kDa
protein.
Length = 828
Score = 30.3 bits (65), Expect = 6.7
Identities = 19/68 (27%), Positives = 34/68 (50%)
Frame = +1
Query: 475 KRNTLKLWYYEDQLKELYGTYVDALNKFAHDTVDANKEKSVSAMSYLLMHHPEREKILLT 654
K T +L +DQLK L+GT + + A + +A + +A + + E E LL
Sbjct: 470 KLATAELTIAKDQLKSLHGTVMKINQERAEELQEAERFSRKAAQAARDLTRAEAEIELLQ 529
Query: 655 NIINKLGD 678
N++ + G+
Sbjct: 530 NLLRQKGE 537
>AL137068-2|CAM13285.1| 2325|Homo sapiens centrosomal protein 110kDa
protein.
Length = 2325
Score = 30.3 bits (65), Expect = 6.7
Identities = 19/68 (27%), Positives = 34/68 (50%)
Frame = +1
Query: 475 KRNTLKLWYYEDQLKELYGTYVDALNKFAHDTVDANKEKSVSAMSYLLMHHPEREKILLT 654
K T +L +DQLK L+GT + + A + +A + +A + + E E LL
Sbjct: 988 KLATAELTIAKDQLKSLHGTVMKINQERAEELQEAERFSRKAAQAARDLTRAEAEIELLQ 1047
Query: 655 NIINKLGD 678
N++ + G+
Sbjct: 1048 NLLRQKGE 1055
>AK128098-1|BAC87273.1| 1185|Homo sapiens protein ( Homo sapiens cDNA
FLJ46219 fis, clone TESTI4013742, moderately similar to
Mus musculus antigen identified by monoclonal antibody ).
Length = 1185
Score = 30.3 bits (65), Expect = 6.7
Identities = 19/68 (27%), Positives = 34/68 (50%)
Frame = +1
Query: 475 KRNTLKLWYYEDQLKELYGTYVDALNKFAHDTVDANKEKSVSAMSYLLMHHPEREKILLT 654
K T +L +DQLK L+GT + + A + +A + +A + + E E LL
Sbjct: 821 KLATAELTIAKDQLKSLHGTVMKINQERAEELQEAERFSRKAAQAARDLTRAEAEIELLQ 880
Query: 655 NIINKLGD 678
N++ + G+
Sbjct: 881 NLLRQKGE 888
>AK074079-1|BAB84905.1| 1793|Homo sapiens FLJ00150 protein protein.
Length = 1793
Score = 30.3 bits (65), Expect = 6.7
Identities = 19/68 (27%), Positives = 34/68 (50%)
Frame = +1
Query: 475 KRNTLKLWYYEDQLKELYGTYVDALNKFAHDTVDANKEKSVSAMSYLLMHHPEREKILLT 654
K T +L +DQLK L+GT + + A + +A + +A + + E E LL
Sbjct: 462 KLATAELTIAKDQLKSLHGTVMKINQERAEELQEAERFSRKAAQAARDLTRAEAEIELLQ 521
Query: 655 NIINKLGD 678
N++ + G+
Sbjct: 522 NLLRQKGE 529
>AF513978-1|AAP43846.1| 2325|Homo sapiens CENTRIOLIN protein.
Length = 2325
Score = 30.3 bits (65), Expect = 6.7
Identities = 19/68 (27%), Positives = 34/68 (50%)
Frame = +1
Query: 475 KRNTLKLWYYEDQLKELYGTYVDALNKFAHDTVDANKEKSVSAMSYLLMHHPEREKILLT 654
K T +L +DQLK L+GT + + A + +A + +A + + E E LL
Sbjct: 988 KLATAELTIAKDQLKSLHGTVMKINQERAEELQEAERFSRKAAQAARDLTRAEAEIELLQ 1047
Query: 655 NIINKLGD 678
N++ + G+
Sbjct: 1048 NLLRQKGE 1055
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,503,789
Number of Sequences: 237096
Number of extensions: 1950973
Number of successful extensions: 4204
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 4069
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4204
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7839245960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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