Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc28k09
         (668 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    29   0.026
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    25   0.56 
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    24   0.98 
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    24   0.98 
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    24   0.98 
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    23   2.3  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   4.0  
AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine 3-mon...    22   5.2  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    22   5.2  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    22   5.2  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    21   9.1  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    21   9.1  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    21   9.1  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    21   9.1  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 29.5 bits (63), Expect = 0.026
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = -2

Query: 598 FIVFQIKLLFFCFKVLC*GIVSIYASFAKLFLHLV 494
           FI+F I LLF+C  ++   I   Y +F    +HL+
Sbjct: 219 FIIFTIHLLFYCVLIILLCIYYFYYAFILFTVHLL 253


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 25.0 bits (52), Expect = 0.56
 Identities = 13/38 (34%), Positives = 18/38 (47%)
 Frame = -2

Query: 607 NLFFIVFQIKLLFFCFKVLC*GIVSIYASFAKLFLHLV 494
           N +FI+FQ+   F+  K      V  + S   L L LV
Sbjct: 296 NFYFIIFQVFESFYLHKATTLETVYYFISLGLLILRLV 333


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 24.2 bits (50), Expect = 0.98
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +1

Query: 406 GHRHHTSRSSKYQLK 450
           GH+HH    +KYQL+
Sbjct: 125 GHQHHFLHENKYQLE 139


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 24.2 bits (50), Expect = 0.98
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +1

Query: 406 GHRHHTSRSSKYQLK 450
           GH+HH    +KYQL+
Sbjct: 125 GHQHHFLHENKYQLE 139


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 24.2 bits (50), Expect = 0.98
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +1

Query: 406 GHRHHTSRSSKYQLK 450
           GH+HH    +KYQL+
Sbjct: 125 GHQHHFLHENKYQLE 139


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = -2

Query: 256 SGDGCDRRIKVICQVLPSL 200
           SG G DRR+++  ++LP L
Sbjct: 566 SGLGSDRRLELFLELLPML 584


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -3

Query: 378  PSGGKQSSSRPV 343
            PSGGK+ SS P+
Sbjct: 980  PSGGKKGSSHPL 991


>AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 212

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +2

Query: 356 EDCFPPDGILDK 391
           EDCF  DGIL++
Sbjct: 88  EDCFLLDGILER 99


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +2

Query: 356 EDCFPPDGILDK 391
           EDCF  DGIL++
Sbjct: 321 EDCFLLDGILER 332


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +2

Query: 356 EDCFPPDGILDK 391
           EDCF  DGIL++
Sbjct: 321 EDCFLLDGILER 332


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = +2

Query: 452 LLLQCNRLPAAKRKHKMQE 508
           LLL    L AA RKH+ QE
Sbjct: 9   LLLLTIGLAAAARKHQKQE 27


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 8/14 (57%), Positives = 13/14 (92%)
 Frame = +3

Query: 555 TLKQKKRSLIWKTM 596
           TLK+KK +L++KT+
Sbjct: 156 TLKRKKWNLLFKTL 169


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 8/14 (57%), Positives = 13/14 (92%)
 Frame = +3

Query: 555 TLKQKKRSLIWKTM 596
           TLK+KK +L++KT+
Sbjct: 82  TLKRKKWNLLFKTL 95


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +3

Query: 438 VPAQICYYSVTAYLQLSGNTR 500
           +P Q  Y +VTA +QLS  TR
Sbjct: 237 LPHQPIYPAVTATVQLSTCTR 257


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,573
Number of Sequences: 336
Number of extensions: 3112
Number of successful extensions: 22
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17385535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)