Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc28k09
         (668 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR prot...    25   2.9  
AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR prot...    23   6.6  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    23   8.7  

>AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR
           protein.
          Length = 502

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = -3

Query: 210 CQAFFFSSLFMAFVVLLFIISFT 142
           C+ F FSS    F+ + F+++FT
Sbjct: 192 CRFFTFSSSLCCFLSVWFVVAFT 214


>AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR
           protein.
          Length = 460

 Score = 23.4 bits (48), Expect = 6.6
 Identities = 7/24 (29%), Positives = 17/24 (70%)
 Frame = -3

Query: 213 FCQAFFFSSLFMAFVVLLFIISFT 142
           +CQ F ++S   +F+ + ++++FT
Sbjct: 110 YCQLFTYTSGVSSFLSVWYVVAFT 133


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
           channel alpha1 subunit protein.
          Length = 1893

 Score = 23.0 bits (47), Expect = 8.7
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = -3

Query: 120 FVSSLVMGAAFVNEFILF*VSTQLKFKRRK 31
           F+S +++GA FV   IL  +S +   +R K
Sbjct: 360 FISMVILGAFFVMNLILGVLSGEFSKERTK 389


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 633,237
Number of Sequences: 2352
Number of extensions: 11317
Number of successful extensions: 17
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66904800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)