Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc28k01
         (755 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    27   0.16 
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    23   2.6  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    22   4.6  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    22   4.6  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    22   4.6  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   8.0  

>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 27.1 bits (57), Expect = 0.16
 Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
 Frame = +1

Query: 133 IVFCKYNLLVGLCDKIDILPKRPL--IILYRVLTFLQF 240
           +V  KY L+     K+ +LPK PL   +LY++L  +QF
Sbjct: 30  LVLNKYLLVKHSKPKMPLLPKTPLPLTLLYKLLGIIQF 67


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
 Frame = -1

Query: 152 LYLQKTISAH-NFNVDEIKVHQLMNDHPN 69
           LY ++T S     NVD  + H L ND PN
Sbjct: 133 LYNERTHSCDWPENVDGCQKHPLCNDDPN 161


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = -1

Query: 95  HQLMNDHPNFIKIYFNHGFINNQVIV 18
           +Q    HPNF +I F +  ++   +V
Sbjct: 502 YQAQKGHPNFFRIVFQNSGLDKADMV 527


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 10/21 (47%), Positives = 15/21 (71%), Gaps = 2/21 (9%)
 Frame = +1

Query: 184 ILPKRPL--IILYRVLTFLQF 240
           +LPK PL   +LY++L  +QF
Sbjct: 3   LLPKTPLPLTLLYKLLGIIQF 23


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = +2

Query: 308 NMNLYNLIYSIIGTIKLMHINF 373
           +++L ++ YS IGT+    +NF
Sbjct: 312 SIHLCDVCYSTIGTVSWCELNF 333


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +3

Query: 198 PVDYFIPSFDVF 233
           P+D + PSFD+F
Sbjct: 95  PIDDYEPSFDLF 106


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,482
Number of Sequences: 336
Number of extensions: 3790
Number of successful extensions: 13
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20234955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)