Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc28k01
         (755 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            25   3.3  
AY146726-1|AAO12086.1|  136|Anopheles gambiae odorant-binding pr...    25   3.3  
AY146729-1|AAO12089.1|  156|Anopheles gambiae odorant-binding pr...    24   5.8  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    23   7.7  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 9/29 (31%), Positives = 13/29 (44%)
 Frame = -3

Query: 303 IRHGHHHRHKCYAANAGTILRKLQKRQNS 217
           + H HHH H   A    +   K   R++S
Sbjct: 159 LHHHHHHHHNAPAGGESSTSEKDSSRESS 187


>AY146726-1|AAO12086.1|  136|Anopheles gambiae odorant-binding
           protein AgamOBP19 protein.
          Length = 136

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +2

Query: 365 INFLNASILRKRKLSKTAFTTTQCC 439
           +N+ N  I+ + +L KTA T  Q C
Sbjct: 9   VNYSNYGIITQEQLEKTARTFRQVC 33


>AY146729-1|AAO12089.1|  156|Anopheles gambiae odorant-binding
           protein AgamOBP5 protein.
          Length = 156

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 5/5 (100%), Positives = 5/5 (100%)
 Frame = +2

Query: 278 WRWWW 292
           WRWWW
Sbjct: 10  WRWWW 14


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskeletal
            structural protein protein.
          Length = 1645

 Score = 23.4 bits (48), Expect = 7.7
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = -3

Query: 303  IRHGHHHRH 277
            + HGHHH H
Sbjct: 1318 LHHGHHHHH 1326


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 755,943
Number of Sequences: 2352
Number of extensions: 16352
Number of successful extensions: 89
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 86
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 89
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 78170964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)