Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc28k01
(755 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK025499-1|BAB15155.1| 872|Homo sapiens protein ( Homo sapiens ... 34 0.64
BC132833-1|AAI32834.1| 388|Homo sapiens hypothetical protein LO... 33 1.5
BC132831-1|AAI32832.1| 388|Homo sapiens hypothetical protein LO... 33 1.5
AL139092-1|CAH73662.1| 388|Homo sapiens protein ( Human DNA seq... 33 1.5
AL138876-2|CAI12221.2| 388|Homo sapiens protein ( Human DNA seq... 33 1.5
BC071596-1|AAH71596.1| 1287|Homo sapiens RAB6 interacting protei... 32 1.9
BC009354-1|AAH09354.2| 948|Homo sapiens RAB6IP1 protein protein. 32 1.9
AB029014-1|BAA83043.1| 1359|Homo sapiens KIAA1091 protein protein. 32 1.9
X60656-1|CAA43063.1| 225|Homo sapiens elongation factor 1-beta ... 31 5.9
X60489-1|CAA43019.1| 225|Homo sapiens elongation factor-1-beta ... 31 5.9
CR456825-1|CAG33106.1| 225|Homo sapiens EEF1B2 protein. 31 5.9
BT007079-1|AAP35742.1| 225|Homo sapiens eukaryotic translation ... 31 5.9
BC067787-1|AAH67787.1| 225|Homo sapiens eukaryotic translation ... 31 5.9
BC004931-1|AAH04931.1| 225|Homo sapiens eukaryotic translation ... 31 5.9
BC000211-1|AAH00211.1| 225|Homo sapiens eukaryotic translation ... 31 5.9
AC007383-2|AAY15062.1| 225|Homo sapiens unknown protein. 31 5.9
AY696295-1|AAU10524.1| 292|Homo sapiens cytochrome P450 protein. 30 7.8
AK097373-1|BAC05026.1| 340|Homo sapiens protein ( Homo sapiens ... 30 7.8
>AK025499-1|BAB15155.1| 872|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21846 fis, clone HEP01887. ).
Length = 872
Score = 33.9 bits (74), Expect = 0.64
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Frame = +1
Query: 454 FLNILKFANDVFDNKAYMYVDDSE--VSRYYNAVVKMKRLVINVRDPSLRQSLYNTIAYI 627
FL FA+ + DNK + DD E V R +++ V RL +NVR P+LR S+Y +
Sbjct: 160 FLETQMFASFI-DNKIMCHDDDDEDPVLRVFDSRVDKIRL-LNVRTPTLRTSMYQKCTTV 217
Query: 628 E 630
+
Sbjct: 218 D 218
>BC132833-1|AAI32834.1| 388|Homo sapiens hypothetical protein
LOC340156 protein.
Length = 388
Score = 32.7 bits (71), Expect = 1.5
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Frame = -1
Query: 200 GRFGKISILSHKPTSKLYLQKTISAHNF-NVDEIKVH-QLMN--DHPNFIKIYFNHGFIN 33
GRFG++ T K I + +E+K +MN DH N I++Y N
Sbjct: 115 GRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKN 174
Query: 32 NQVIVMDYID 3
+ V+VM+Y+D
Sbjct: 175 DIVLVMEYVD 184
>BC132831-1|AAI32832.1| 388|Homo sapiens hypothetical protein
LOC340156 protein.
Length = 388
Score = 32.7 bits (71), Expect = 1.5
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Frame = -1
Query: 200 GRFGKISILSHKPTSKLYLQKTISAHNF-NVDEIKVH-QLMN--DHPNFIKIYFNHGFIN 33
GRFG++ T K I + +E+K +MN DH N I++Y N
Sbjct: 115 GRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKN 174
Query: 32 NQVIVMDYID 3
+ V+VM+Y+D
Sbjct: 175 DIVLVMEYVD 184
>AL139092-1|CAH73662.1| 388|Homo sapiens protein ( Human DNA
sequence from clone RP11-420G6 on chromosome 6 Contains
the WRNIP1 gene for Werner helicase interacting protein
1, the ).
Length = 388
Score = 32.7 bits (71), Expect = 1.5
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Frame = -1
Query: 200 GRFGKISILSHKPTSKLYLQKTISAHNF-NVDEIKVH-QLMN--DHPNFIKIYFNHGFIN 33
GRFG++ T K I + +E+K +MN DH N I++Y N
Sbjct: 115 GRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKN 174
Query: 32 NQVIVMDYID 3
+ V+VM+Y+D
Sbjct: 175 DIVLVMEYVD 184
>AL138876-2|CAI12221.2| 388|Homo sapiens protein ( Human DNA
sequence from clone RP11-145H9 on chromosome 6 Contains
part of a gene for a novel protein similar to myosin
light chain ).
Length = 388
Score = 32.7 bits (71), Expect = 1.5
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Frame = -1
Query: 200 GRFGKISILSHKPTSKLYLQKTISAHNF-NVDEIKVH-QLMN--DHPNFIKIYFNHGFIN 33
GRFG++ T K I + +E+K +MN DH N I++Y N
Sbjct: 115 GRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKN 174
Query: 32 NQVIVMDYID 3
+ V+VM+Y+D
Sbjct: 175 DIVLVMEYVD 184
>BC071596-1|AAH71596.1| 1287|Homo sapiens RAB6 interacting protein 1
protein.
Length = 1287
Score = 32.3 bits (70), Expect = 1.9
Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Frame = +1
Query: 454 FLNILKFANDVFDNKAYMYVDDSE--VSRYYNAVVKMKRLVINVRDPSLRQSLYNTIAYI 627
FL FA+ + DNK + DD + V R +++ V RL +NVR P+LR S+Y +
Sbjct: 575 FLETQMFASFI-DNKIMCHDDDDKDPVLRVFDSRVDKIRL-LNVRTPTLRTSMYQKCTTV 632
Query: 628 E 630
+
Sbjct: 633 D 633
>BC009354-1|AAH09354.2| 948|Homo sapiens RAB6IP1 protein protein.
Length = 948
Score = 32.3 bits (70), Expect = 1.9
Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Frame = +1
Query: 454 FLNILKFANDVFDNKAYMYVDDSE--VSRYYNAVVKMKRLVINVRDPSLRQSLYNTIAYI 627
FL FA+ + DNK + DD + V R +++ V RL +NVR P+LR S+Y +
Sbjct: 236 FLETQMFASFI-DNKIMCHDDDDKDPVLRVFDSRVDKIRL-LNVRTPTLRTSMYQKCTTV 293
Query: 628 E 630
+
Sbjct: 294 D 294
>AB029014-1|BAA83043.1| 1359|Homo sapiens KIAA1091 protein protein.
Length = 1359
Score = 32.3 bits (70), Expect = 1.9
Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Frame = +1
Query: 454 FLNILKFANDVFDNKAYMYVDDSE--VSRYYNAVVKMKRLVINVRDPSLRQSLYNTIAYI 627
FL FA+ + DNK + DD + V R +++ V RL +NVR P+LR S+Y +
Sbjct: 647 FLETQMFASFI-DNKIMCHDDDDKDPVLRVFDSRVDKIRL-LNVRTPTLRTSMYQKCTTV 704
Query: 628 E 630
+
Sbjct: 705 D 705
>X60656-1|CAA43063.1| 225|Homo sapiens elongation factor 1-beta
protein.
Length = 225
Score = 30.7 bits (66), Expect = 5.9
Identities = 12/45 (26%), Positives = 21/45 (46%)
Frame = -2
Query: 316 IHIYDSSWPPPPPQMLRCKRWYNFTKTAKTSKLGIK*STGVLAKY 182
+ ++++ PPP + RWYN K+ + K + L KY
Sbjct: 35 VAVFEAVSSPPPADLCHALRWYNHIKSYEKEKASLPGVKKALGKY 79
>X60489-1|CAA43019.1| 225|Homo sapiens elongation factor-1-beta
protein.
Length = 225
Score = 30.7 bits (66), Expect = 5.9
Identities = 12/45 (26%), Positives = 21/45 (46%)
Frame = -2
Query: 316 IHIYDSSWPPPPPQMLRCKRWYNFTKTAKTSKLGIK*STGVLAKY 182
+ ++++ PPP + RWYN K+ + K + L KY
Sbjct: 35 VAVFEAVSSPPPADLCHALRWYNHIKSYEKEKASLPGVKKALGKY 79
>CR456825-1|CAG33106.1| 225|Homo sapiens EEF1B2 protein.
Length = 225
Score = 30.7 bits (66), Expect = 5.9
Identities = 12/45 (26%), Positives = 21/45 (46%)
Frame = -2
Query: 316 IHIYDSSWPPPPPQMLRCKRWYNFTKTAKTSKLGIK*STGVLAKY 182
+ ++++ PPP + RWYN K+ + K + L KY
Sbjct: 35 VAVFEAVSSPPPADLCHALRWYNHIKSYEKEKASLPGVKKALGKY 79
>BT007079-1|AAP35742.1| 225|Homo sapiens eukaryotic translation
elongation factor 1 beta 2 protein.
Length = 225
Score = 30.7 bits (66), Expect = 5.9
Identities = 12/45 (26%), Positives = 21/45 (46%)
Frame = -2
Query: 316 IHIYDSSWPPPPPQMLRCKRWYNFTKTAKTSKLGIK*STGVLAKY 182
+ ++++ PPP + RWYN K+ + K + L KY
Sbjct: 35 VAVFEAVSSPPPADLCHALRWYNHIKSYEKEKASLPGVKKALGKY 79
>BC067787-1|AAH67787.1| 225|Homo sapiens eukaryotic translation
elongation factor 1 beta 2 protein.
Length = 225
Score = 30.7 bits (66), Expect = 5.9
Identities = 12/45 (26%), Positives = 21/45 (46%)
Frame = -2
Query: 316 IHIYDSSWPPPPPQMLRCKRWYNFTKTAKTSKLGIK*STGVLAKY 182
+ ++++ PPP + RWYN K+ + K + L KY
Sbjct: 35 VAVFEAVSSPPPADLCHALRWYNHIKSYEKEKASLPGVKKALGKY 79
>BC004931-1|AAH04931.1| 225|Homo sapiens eukaryotic translation
elongation factor 1 beta 2 protein.
Length = 225
Score = 30.7 bits (66), Expect = 5.9
Identities = 12/45 (26%), Positives = 21/45 (46%)
Frame = -2
Query: 316 IHIYDSSWPPPPPQMLRCKRWYNFTKTAKTSKLGIK*STGVLAKY 182
+ ++++ PPP + RWYN K+ + K + L KY
Sbjct: 35 VAVFEAVSSPPPADLCHALRWYNHIKSYEKEKASLPGVKKALGKY 79
>BC000211-1|AAH00211.1| 225|Homo sapiens eukaryotic translation
elongation factor 1 beta 2 protein.
Length = 225
Score = 30.7 bits (66), Expect = 5.9
Identities = 12/45 (26%), Positives = 21/45 (46%)
Frame = -2
Query: 316 IHIYDSSWPPPPPQMLRCKRWYNFTKTAKTSKLGIK*STGVLAKY 182
+ ++++ PPP + RWYN K+ + K + L KY
Sbjct: 35 VAVFEAVSSPPPADLCHALRWYNHIKSYEKEKASLPGVKKALGKY 79
>AC007383-2|AAY15062.1| 225|Homo sapiens unknown protein.
Length = 225
Score = 30.7 bits (66), Expect = 5.9
Identities = 12/45 (26%), Positives = 21/45 (46%)
Frame = -2
Query: 316 IHIYDSSWPPPPPQMLRCKRWYNFTKTAKTSKLGIK*STGVLAKY 182
+ ++++ PPP + RWYN K+ + K + L KY
Sbjct: 35 VAVFEAVSSPPPADLCHALRWYNHIKSYEKEKASLPGVKKALGKY 79
>AY696295-1|AAU10524.1| 292|Homo sapiens cytochrome P450 protein.
Length = 292
Score = 30.3 bits (65), Expect = 7.8
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +1
Query: 316 SVQSYLFNNRNNKIDAHQFFERVDTAEAQIIKDSIYDNTVLLNRDVFLNIL 468
S Q +F+ N ++ HQF E+V + +KD + +T R FL+IL
Sbjct: 240 SSQGQIFSKFNQEL--HQFTEKVIQDRKESLKDKLKQDTTQKRRQDFLDIL 288
>AK097373-1|BAC05026.1| 340|Homo sapiens protein ( Homo sapiens
cDNA FLJ40054 fis, clone TBAES2000315, weakly similar to
CYTOCHROME P450 4A1 (EC 1.14.15.3). ).
Length = 340
Score = 30.3 bits (65), Expect = 7.8
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +1
Query: 316 SVQSYLFNNRNNKIDAHQFFERVDTAEAQIIKDSIYDNTVLLNRDVFLNIL 468
S Q +F+ N ++ HQF E+V + +KD + +T R FL+IL
Sbjct: 240 SSQGQIFSKFNQEL--HQFTEKVIQDRKESLKDKLKQDTTQKRRQDFLDIL 288
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,665,244
Number of Sequences: 237096
Number of extensions: 1914216
Number of successful extensions: 5018
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 4570
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5017
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9127122082
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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