Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc28j18
(250 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical pr... 24 1.8
U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical pr... 24 1.8
U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical pr... 24 1.8
Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical pr... 24 1.8
U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical pr... 24 1.8
U40947-4|AAZ32798.1| 883|Caenorhabditis elegans Anion/bicarbona... 26 3.1
U40947-3|AAZ32797.1| 956|Caenorhabditis elegans Anion/bicarbona... 26 3.1
AY954522-1|AAX34430.1| 936|Caenorhabditis elegans anion transpo... 26 3.1
AY887906-1|AAX34418.1| 956|Caenorhabditis elegans anion transpo... 26 3.1
Z81110-6|CAB03260.2| 1011|Caenorhabditis elegans Hypothetical pr... 26 4.1
Z81110-2|CAB03259.1| 802|Caenorhabditis elegans Hypothetical pr... 26 4.1
Z32673-1|CAA83585.1| 472|Caenorhabditis elegans transcription f... 26 4.1
Z77134-3|CAB00874.1| 1603|Caenorhabditis elegans Hypothetical pr... 25 5.4
U80455-10|AAB37887.2| 395|Caenorhabditis elegans Activated in b... 25 5.4
Z47075-3|CAA87383.2| 182|Caenorhabditis elegans Hypothetical pr... 25 7.1
Z22181-4|CAA80182.1| 824|Caenorhabditis elegans Hypothetical pr... 25 7.1
U41263-7|AAC24431.1| 462|Caenorhabditis elegans Hypothetical pr... 25 7.1
L23648-4|AAA28033.2| 555|Caenorhabditis elegans Cyclin t protei... 25 7.1
Z68335-2|CAA92731.1| 390|Caenorhabditis elegans Hypothetical pr... 25 9.4
Z47808-2|CAA87770.1| 415|Caenorhabditis elegans Hypothetical pr... 25 9.4
>Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical
protein R13H4.8 protein.
Length = 212
Score = 23.8 bits (49), Expect(2) = 1.8
Identities = 6/10 (60%), Positives = 7/10 (70%)
Frame = -1
Query: 76 CGCCCKNCAT 47
C CCC+ C T
Sbjct: 93 CCCCCRRCCT 102
Score = 21.8 bits (44), Expect(2) = 1.8
Identities = 7/14 (50%), Positives = 7/14 (50%)
Frame = -1
Query: 70 CCCKNCATNNYP*C 29
CCC C T P C
Sbjct: 107 CCCTRCCTCCRPCC 120
>U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical
protein C04G6.7 protein.
Length = 197
Score = 23.8 bits (49), Expect(2) = 1.8
Identities = 6/10 (60%), Positives = 7/10 (70%)
Frame = -1
Query: 76 CGCCCKNCAT 47
C CCC+ C T
Sbjct: 93 CCCCCRRCCT 102
Score = 21.8 bits (44), Expect(2) = 1.8
Identities = 7/14 (50%), Positives = 7/14 (50%)
Frame = -1
Query: 70 CCCKNCATNNYP*C 29
CCC C T P C
Sbjct: 107 CCCTRCCTCCRPCC 120
>U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical
protein C27A2.5 protein.
Length = 188
Score = 23.8 bits (49), Expect(2) = 1.8
Identities = 6/10 (60%), Positives = 7/10 (70%)
Frame = -1
Query: 76 CGCCCKNCAT 47
C CCC+ C T
Sbjct: 92 CCCCCRRCCT 101
Score = 21.8 bits (44), Expect(2) = 1.8
Identities = 7/14 (50%), Positives = 7/14 (50%)
Frame = -1
Query: 70 CCCKNCATNNYP*C 29
CCC C T P C
Sbjct: 106 CCCTRCCTCCRPCC 119
>Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical
protein T01B7.8 protein.
Length = 164
Score = 23.8 bits (49), Expect(2) = 1.8
Identities = 6/10 (60%), Positives = 7/10 (70%)
Frame = -1
Query: 76 CGCCCKNCAT 47
C CCC+ C T
Sbjct: 91 CCCCCRRCCT 100
Score = 21.8 bits (44), Expect(2) = 1.8
Identities = 7/14 (50%), Positives = 7/14 (50%)
Frame = -1
Query: 70 CCCKNCATNNYP*C 29
CCC C T P C
Sbjct: 105 CCCTRCCTCCRPCC 118
>U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical
protein C04G6.10 protein.
Length = 166
Score = 23.8 bits (49), Expect(2) = 1.8
Identities = 6/10 (60%), Positives = 7/10 (70%)
Frame = -1
Query: 76 CGCCCKNCAT 47
C CCC+ C T
Sbjct: 92 CCCCCRRCCT 101
Score = 21.8 bits (44), Expect(2) = 1.8
Identities = 7/14 (50%), Positives = 7/14 (50%)
Frame = -1
Query: 70 CCCKNCATNNYP*C 29
CCC C T P C
Sbjct: 106 CCCTRCCTCCRPCC 119
>U40947-4|AAZ32798.1| 883|Caenorhabditis elegans Anion/bicarbonate
transporter familyprotein 4, isoform b protein.
Length = 883
Score = 26.2 bits (55), Expect = 3.1
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +3
Query: 18 LPVLHYG*LFVAQFLQQQPQTSQADNV 98
LP H G F + FL QQP SQ + V
Sbjct: 229 LPTSHSGLRFGSSFLPQQPVVSQLEPV 255
>U40947-3|AAZ32797.1| 956|Caenorhabditis elegans Anion/bicarbonate
transporter familyprotein 4, isoform a protein.
Length = 956
Score = 26.2 bits (55), Expect = 3.1
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +3
Query: 18 LPVLHYG*LFVAQFLQQQPQTSQADNV 98
LP H G F + FL QQP SQ + V
Sbjct: 229 LPTSHSGLRFGSSFLPQQPVVSQLEPV 255
>AY954522-1|AAX34430.1| 936|Caenorhabditis elegans anion
transporter ABTS-4b protein.
Length = 936
Score = 26.2 bits (55), Expect = 3.1
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +3
Query: 18 LPVLHYG*LFVAQFLQQQPQTSQADNV 98
LP H G F + FL QQP SQ + V
Sbjct: 229 LPTSHSGLRFGSSFLPQQPVVSQLEPV 255
>AY887906-1|AAX34418.1| 956|Caenorhabditis elegans anion
transporter ABTS-4a protein.
Length = 956
Score = 26.2 bits (55), Expect = 3.1
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +3
Query: 18 LPVLHYG*LFVAQFLQQQPQTSQADNV 98
LP H G F + FL QQP SQ + V
Sbjct: 229 LPTSHSGLRFGSSFLPQQPVVSQLEPV 255
>Z81110-6|CAB03260.2| 1011|Caenorhabditis elegans Hypothetical
protein T01D3.3b protein.
Length = 1011
Score = 25.8 bits (54), Expect = 4.1
Identities = 10/28 (35%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Frame = -1
Query: 82 EVCGCCCK-NCATNNYP*CSTGNITDAY 2
+ CG C +CAT N P C+ +T +
Sbjct: 365 QTCGSACPISCATRNQPRCNERCVTGCF 392
>Z81110-2|CAB03259.1| 802|Caenorhabditis elegans Hypothetical
protein T01D3.3a protein.
Length = 802
Score = 25.8 bits (54), Expect = 4.1
Identities = 10/28 (35%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Frame = -1
Query: 82 EVCGCCCK-NCATNNYP*CSTGNITDAY 2
+ CG C +CAT N P C+ +T +
Sbjct: 156 QTCGSACPISCATRNQPRCNERCVTGCF 183
>Z32673-1|CAA83585.1| 472|Caenorhabditis elegans transcription
factor protein.
Length = 472
Score = 25.8 bits (54), Expect = 4.1
Identities = 8/25 (32%), Positives = 15/25 (60%)
Frame = -2
Query: 177 RHIFFAHQLANICDXXVNRFFNVTI 103
RH+F H + +CD +++F V +
Sbjct: 20 RHLFIFHSITALCDHMLSKFVVVEV 44
>Z77134-3|CAB00874.1| 1603|Caenorhabditis elegans Hypothetical
protein R09H10.5 protein.
Length = 1603
Score = 25.4 bits (53), Expect = 5.4
Identities = 13/26 (50%), Positives = 15/26 (57%), Gaps = 2/26 (7%)
Frame = -3
Query: 188 SCSPGIFSLHISLRTYV--IXS*TDF 117
SC PG++S H RT V I S DF
Sbjct: 181 SCPPGLYSAHCEARTCVTKIDSVVDF 206
>U80455-10|AAB37887.2| 395|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 11 protein.
Length = 395
Score = 25.4 bits (53), Expect = 5.4
Identities = 9/27 (33%), Positives = 13/27 (48%)
Frame = -1
Query: 226 CXLCYNRDCKTCDRARQAYFLCTSACE 146
C C N TC + +Q C S+C+
Sbjct: 199 CNTCQNSCLNTCQQQQQPVQQCQSSCD 225
>Z47075-3|CAA87383.2| 182|Caenorhabditis elegans Hypothetical
protein E02H1.6 protein.
Length = 182
Score = 25.0 bits (52), Expect = 7.1
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -2
Query: 141 CDXXVNRFFNVTIVXRCRLER 79
CD R+F+V +V RC E+
Sbjct: 89 CDLFPERWFDVVVVLRCPTEK 109
>Z22181-4|CAA80182.1| 824|Caenorhabditis elegans Hypothetical
protein ZK632.5 protein.
Length = 824
Score = 25.0 bits (52), Expect = 7.1
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -2
Query: 189 IVLARHIFFAHQLANICDXXVNRFFNVT 106
I+L +HIF A+QLA N F T
Sbjct: 249 IILQKHIFIANQLAEAIQKLKNIFVTGT 276
>U41263-7|AAC24431.1| 462|Caenorhabditis elegans Hypothetical
protein T19D12.9 protein.
Length = 462
Score = 25.0 bits (52), Expect = 7.1
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +1
Query: 19 CLCCTMDNYSLHNF 60
C+CCT NY+ NF
Sbjct: 31 CICCTNANYNAINF 44
>L23648-4|AAA28033.2| 555|Caenorhabditis elegans Cyclin t protein
1.2, isoform a protein.
Length = 555
Score = 25.0 bits (52), Expect = 7.1
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -2
Query: 159 HQLANICDXXVNRFFNVTIVXRC 91
H L+ + NRFFNV + RC
Sbjct: 71 HGLSGVAATLFNRFFNVHSLKRC 93
>Z68335-2|CAA92731.1| 390|Caenorhabditis elegans Hypothetical
protein C29F4.3 protein.
Length = 390
Score = 24.6 bits (51), Expect = 9.4
Identities = 10/35 (28%), Positives = 18/35 (51%)
Frame = -2
Query: 195 LVIVLARHIFFAHQLANICDXXVNRFFNVTIVXRC 91
L ++ FF+ Q + +N+ FN+TI+ C
Sbjct: 89 LKVIYVIDFFFSAQWIDEVSEALNQIFNMTIILSC 123
>Z47808-2|CAA87770.1| 415|Caenorhabditis elegans Hypothetical
protein D2013.2 protein.
Length = 415
Score = 24.6 bits (51), Expect = 9.4
Identities = 18/57 (31%), Positives = 22/57 (38%)
Frame = -1
Query: 205 DCKTCDRARQAYFLCTSACEHM*YXRKPIF*CYHRVTLSA*EVCGCCCKNCATNNYP 35
DC C + Q +F A + RK + H VCG CC N T YP
Sbjct: 290 DC--CQKCNQPFFWNLQAM----WQRKVVGLRQHHCRTCGSAVCGSCCDNWTT--YP 338
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,852,876
Number of Sequences: 27780
Number of extensions: 81802
Number of successful extensions: 212
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 191
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 212
length of database: 12,740,198
effective HSP length: 62
effective length of database: 11,017,838
effective search space used: 220356760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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