Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc28j16
(714 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 219 2e-57
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 218 4e-57
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 216 2e-56
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 215 3e-56
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 214 5e-56
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 214 7e-56
03_01_0034 + 318432-318825,318902-319851 212 2e-55
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 202 3e-52
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 112 3e-25
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 108 4e-24
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 105 5e-23
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324... 98 7e-21
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 82 4e-16
12_02_0931 + 24512496-24512567,24512705-24512806,24512939-245129... 32 0.52
06_03_0276 + 19087075-19087910,19089117-19089607,19089737-19091124 31 0.69
12_02_0795 + 23217463-23217684,23218296-23219155,23220001-232209... 31 1.2
09_04_0325 + 16689613-16689772,16690043-16690329 30 1.6
03_02_0319 - 7421357-7421757,7421768-7421843,7424695-7424796,742... 30 2.1
03_01_0524 + 3943581-3943610,3943889-3944050,3944403-3944637,394... 30 2.1
07_01_1133 - 10550799-10551137,10552195-10552254,10555693-105574... 29 2.8
11_04_0054 - 12895574-12895840,12906985-12908121,12908274-12908591 29 3.7
11_01_0796 - 7000747-7001193 29 3.7
09_04_0516 - 18246439-18246582,18246763-18246899,18247067-182470... 29 4.8
09_01_0175 - 2509014-2509064,2509389-2509490,2509603-2509729,250... 29 4.8
08_02_1160 - 24793708-24794796,24794888-24794951,24795028-247951... 29 4.8
11_01_0428 + 3279662-3279784,3281676-3281756,3281845-3281933,328... 28 6.4
03_05_0615 + 26137785-26138593,26139307-26141368 28 6.4
10_01_0300 - 3257584-3258825 28 8.5
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 219 bits (535), Expect = 2e-57
Identities = 93/111 (83%), Positives = 104/111 (93%)
Frame = +3
Query: 381 MREIVHVQAGQCGNQIGSKFWEIISDEHGVDTTGVYKGESDLQLDRINVYYNEASSGKYV 560
MREI+H+Q GQCGNQIG+KFWE+I DEHG+D TG Y G+SDLQL+RINVYYNEAS G+YV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYV 60
Query: 561 PRAVLVDLEPGTMDAVRSGPYGMLFRPDNFVFGQSGAGNNWAKGHYTEGAE 713
PRAVL+DLEPGTMD+VRSGPYG +FRPDNFVFGQSGAGNNWAKGHYTEGAE
Sbjct: 61 PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 111
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 218 bits (532), Expect = 4e-57
Identities = 93/111 (83%), Positives = 104/111 (93%)
Frame = +3
Query: 381 MREIVHVQAGQCGNQIGSKFWEIISDEHGVDTTGVYKGESDLQLDRINVYYNEASSGKYV 560
MREI+H+Q GQCGNQIG+KFWE+I DEHGVD TG Y G+SDLQL+RINVYYNEAS G+YV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGVDATGRYAGDSDLQLERINVYYNEASGGRYV 60
Query: 561 PRAVLVDLEPGTMDAVRSGPYGMLFRPDNFVFGQSGAGNNWAKGHYTEGAE 713
PRAVL+DLEPGTMD+VRSGP+G +FRPDNFVFGQSGAGNNWAKGHYTEGAE
Sbjct: 61 PRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 111
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 216 bits (527), Expect = 2e-56
Identities = 91/111 (81%), Positives = 104/111 (93%)
Frame = +3
Query: 381 MREIVHVQAGQCGNQIGSKFWEIISDEHGVDTTGVYKGESDLQLDRINVYYNEASSGKYV 560
MREI+H+Q GQCGNQIG+KFWE+I DEHG+D TG Y G+SDLQL+RINVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRFV 60
Query: 561 PRAVLVDLEPGTMDAVRSGPYGMLFRPDNFVFGQSGAGNNWAKGHYTEGAE 713
PRAVL+DLEPGTMD+VRSGP+G +FRPDNFVFGQSGAGNNWAKGHYTEGAE
Sbjct: 61 PRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 111
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 215 bits (525), Expect = 3e-56
Identities = 90/112 (80%), Positives = 104/112 (92%)
Frame = +3
Query: 378 EMREIVHVQAGQCGNQIGSKFWEIISDEHGVDTTGVYKGESDLQLDRINVYYNEASSGKY 557
+MREI+H+Q GQCGNQIGSKFWE++ DEHG+D TG Y G SDLQL+R+NVYYNEAS G++
Sbjct: 180 KMREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYAGTSDLQLERVNVYYNEASCGRF 239
Query: 558 VPRAVLVDLEPGTMDAVRSGPYGMLFRPDNFVFGQSGAGNNWAKGHYTEGAE 713
VPRAVL+DLEPGTMD+VR+GPYG +FRPDNFVFGQSGAGNNWAKGHYTEGAE
Sbjct: 240 VPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 291
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 214 bits (523), Expect = 5e-56
Identities = 90/111 (81%), Positives = 103/111 (92%)
Frame = +3
Query: 381 MREIVHVQAGQCGNQIGSKFWEIISDEHGVDTTGVYKGESDLQLDRINVYYNEASSGKYV 560
MREI+H+Q GQCGNQIGSKFWE++ DEHG+D TG Y G SDLQL+R+NVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGTSDLQLERVNVYYNEASCGRFV 60
Query: 561 PRAVLVDLEPGTMDAVRSGPYGMLFRPDNFVFGQSGAGNNWAKGHYTEGAE 713
PRAVL+DLEPGTMD+VR+GPYG +FRPDNFVFGQSGAGNNWAKGHYTEGAE
Sbjct: 61 PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 111
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 214 bits (522), Expect = 7e-56
Identities = 89/111 (80%), Positives = 103/111 (92%)
Frame = +3
Query: 381 MREIVHVQAGQCGNQIGSKFWEIISDEHGVDTTGVYKGESDLQLDRINVYYNEASSGKYV 560
MREI+H+Q GQCGNQIG+KFWE++ DEHG+D TG Y G SDLQL+R+NVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCDEHGIDPTGRYTGNSDLQLERVNVYYNEASCGRFV 60
Query: 561 PRAVLVDLEPGTMDAVRSGPYGMLFRPDNFVFGQSGAGNNWAKGHYTEGAE 713
PRAVL+DLEPGTMD+VR+GPYG +FRPDNFVFGQSGAGNNWAKGHYTEGAE
Sbjct: 61 PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 111
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 212 bits (518), Expect = 2e-55
Identities = 89/111 (80%), Positives = 103/111 (92%)
Frame = +3
Query: 381 MREIVHVQAGQCGNQIGSKFWEIISDEHGVDTTGVYKGESDLQLDRINVYYNEASSGKYV 560
MREI+H+Q GQCGNQIG+KFWE++ EHG+D TG Y G+SDLQL+R+NVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDATGRYDGDSDLQLERVNVYYNEASCGRFV 60
Query: 561 PRAVLVDLEPGTMDAVRSGPYGMLFRPDNFVFGQSGAGNNWAKGHYTEGAE 713
PRAVL+DLEPGTMD+VRSGPYG +FRPDNFVFGQSGAGNNWAKGHYTEGAE
Sbjct: 61 PRAVLMDLEPGTMDSVRSGPYGHIFRPDNFVFGQSGAGNNWAKGHYTEGAE 111
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 202 bits (492), Expect = 3e-52
Identities = 87/111 (78%), Positives = 99/111 (89%)
Frame = +3
Query: 381 MREIVHVQAGQCGNQIGSKFWEIISDEHGVDTTGVYKGESDLQLDRINVYYNEASSGKYV 560
MREI+H+Q GQCGNQIG+KFWE+I EHGVD TG Y G S QL+RINVY+NEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGVDPTGTYTGTSPQQLERINVYFNEASGGRHV 60
Query: 561 PRAVLVDLEPGTMDAVRSGPYGMLFRPDNFVFGQSGAGNNWAKGHYTEGAE 713
PRAVL+DLEPGTMD++RSGP G +FRPDNFVFGQSGAGNNWAKGHYTEGAE
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPIGGIFRPDNFVFGQSGAGNNWAKGHYTEGAE 111
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 112 bits (269), Expect = 3e-25
Identities = 48/113 (42%), Positives = 72/113 (63%), Gaps = 2/113 (1%)
Frame = +3
Query: 381 MREIVHVQAGQCGNQIGSKFWEIISDEHGVDTTGVYKGESDLQL--DRINVYYNEASSGK 554
MREI+ + GQ G Q+G+ WE+ EHG++ G ++ + + D N +++E +GK
Sbjct: 1 MREIISIHIGQAGIQVGNACWELYCLEHGIEPDGTMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 555 YVPRAVLVDLEPGTMDAVRSGPYGMLFRPDNFVFGQSGAGNNWAKGHYTEGAE 713
+VPRA+ VDLEP +D VR+G Y LF P+ + G+ A NN+A+GHYT G E
Sbjct: 61 HVPRAIFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKE 113
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 108 bits (260), Expect = 4e-24
Identities = 49/113 (43%), Positives = 69/113 (61%), Gaps = 2/113 (1%)
Frame = +3
Query: 381 MREIVHVQAGQCGNQIGSKFWEIISDEHGVDTTGVYKGESDLQL--DRINVYYNEASSGK 554
MRE + + GQ G Q+G+ WE+ EHG+ G G+ + D N +++E +GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 555 YVPRAVLVDLEPGTMDAVRSGPYGMLFRPDNFVFGQSGAGNNWAKGHYTEGAE 713
+VPRAV VDLEP +D VR+G Y LF P+ + G+ A NN+A+GHYT G E
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGDYRQLFHPEQLISGKEDAANNFARGHYTIGKE 113
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 105 bits (251), Expect = 5e-23
Identities = 48/113 (42%), Positives = 68/113 (60%), Gaps = 2/113 (1%)
Frame = +3
Query: 381 MREIVHVQAGQCGNQIGSKFWEIISDEHGVDTTGVYKGESDLQL--DRINVYYNEASSGK 554
MRE + + GQ G Q+G+ WE+ EHG+ G + + D N +++E +GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQADGQMPSDRTVGGGDDAFNTFFSETGAGK 60
Query: 555 YVPRAVLVDLEPGTMDAVRSGPYGMLFRPDNFVFGQSGAGNNWAKGHYTEGAE 713
+VPRAV VDLEP +D VR+G Y LF P+ + G+ A NN+A+GHYT G E
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGCYRQLFHPEQLINGKEDAANNFARGHYTIGKE 113
>05_01_0412 -
3248405-3248458,3248533-3248637,3248950-3249078,
3249279-3249353,3249520-3249624,3249714-3249767,
3249970-3250370,3250583-3250694,3250886-3251086,
3251844-3251972
Length = 454
Score = 97.9 bits (233), Expect = 7e-21
Identities = 43/107 (40%), Positives = 68/107 (63%), Gaps = 2/107 (1%)
Frame = +3
Query: 384 REIVHVQAGQCGNQIGSKFWEIISDEHGVDTTGVYKGESDLQLDRINVYYNEASSGKYVP 563
REI+ +Q GQCGNQIG +FW+ + EHG+ G+ + + DR +V++ +A Y+P
Sbjct: 3 REIITIQVGQCGNQIGMEFWKQLCLEHGIGKDGLLEDFATQGGDRKDVFFYQADDQHYIP 62
Query: 564 RAVLVDLEPGTMDAVRSGPYGMLFRPDNFVFGQ--SGAGNNWAKGHY 698
RA+LVDLEP ++ +++ Y L+ +N + GAGNNWA G++
Sbjct: 63 RALLVDLEPRVINGIQNSEYRNLYNHENIFVAEHGGGAGNNWASGYH 109
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 82.2 bits (194), Expect = 4e-16
Identities = 34/67 (50%), Positives = 47/67 (70%)
Frame = +3
Query: 513 DRINVYYNEASSGKYVPRAVLVDLEPGTMDAVRSGPYGMLFRPDNFVFGQSGAGNNWAKG 692
D N +++E SSGK+VPRA+ VDLEP +D V++GPY LF P+ + + A NN+A+G
Sbjct: 107 DAFNTFFSETSSGKHVPRALFVDLEPTVIDEVKTGPYRQLFHPEQLISYKEDAANNFARG 166
Query: 693 HYTEGAE 713
HYT G E
Sbjct: 167 HYTVGRE 173
Score = 39.9 bits (89), Expect = 0.002
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +3
Query: 381 MREIVHVQAGQCGNQIGSKFWEIISDEHGVDTTGV 485
MREI+ + GQ G Q+G+ WE+ EHG+ G+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGL 35
>12_02_0931 +
24512496-24512567,24512705-24512806,24512939-24512984,
24513292-24513355,24513997-24514348,24514497-24514749,
24515069-24515311,24515399-24515518,24515710-24516158
Length = 566
Score = 31.9 bits (69), Expect = 0.52
Identities = 26/73 (35%), Positives = 33/73 (45%), Gaps = 6/73 (8%)
Frame = +3
Query: 381 MREIVHVQAGQCGNQIGSKFW----EIISDEHGVDTTGVYKGESDLQLDRINVYYNEASS 548
MRE V VQ G N +GS FW E++ D V+K + L +D + E
Sbjct: 1 MREAVTVQVGGFANYVGSHFWNFQDELLGLADDPDADPVFKNAA-LDMD-VLYRSGETHQ 58
Query: 549 G--KYVPRAVLVD 581
G Y PR V VD
Sbjct: 59 GVATYCPRLVSVD 71
>06_03_0276 + 19087075-19087910,19089117-19089607,19089737-19091124
Length = 904
Score = 31.5 bits (68), Expect = 0.69
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +3
Query: 225 LSLHLLSVVHYISVFPRKKAISSDKIDYIIGFRIVHLI 338
L HL + + Y+S FP I ++ DYI+G R+ ++
Sbjct: 422 LPYHLRTCLLYLSAFPEDYLIEAENEDYILGCRVHDMV 459
>12_02_0795 +
23217463-23217684,23218296-23219155,23220001-23220929,
23221184-23221968
Length = 931
Score = 30.7 bits (66), Expect = 1.2
Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 8/70 (11%)
Frame = +3
Query: 117 LMSN*ENNNLQAEKITNNLPSILQKKMN*CITELR-FLSL-------HLLSVVHYISVFP 272
L++N N + E++ N++ S LQK + + E+R LSL HL + + Y+S+FP
Sbjct: 466 LLANKANTKEEWERVRNSIGSTLQKDPD--VEEMRRILSLSYDDLPQHLKTCLLYLSIFP 523
Query: 273 RKKAISSDKI 302
I D++
Sbjct: 524 EDYEIERDRL 533
>09_04_0325 + 16689613-16689772,16690043-16690329
Length = 148
Score = 30.3 bits (65), Expect = 1.6
Identities = 14/19 (73%), Positives = 14/19 (73%), Gaps = 1/19 (5%)
Frame = +3
Query: 633 FRPDNFVFGQSGAGN-NWA 686
F PDNFVF QS AG NWA
Sbjct: 129 FNPDNFVFHQSVAGGINWA 147
>03_02_0319 -
7421357-7421757,7421768-7421843,7424695-7424796,
7424911-7424982
Length = 216
Score = 29.9 bits (64), Expect = 2.1
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Frame = +3
Query: 381 MREIVHVQAGQCGNQIGSKFW----EIISDEHGVDTTGVYKGESDLQLDRINVYYNEASS 548
MRE V VQ G N +GS FW E++ D V+K ++ LD +Y + +
Sbjct: 1 MREAVTVQVGGFANYVGSHFWNFQDELLGLADDPDADPVFKNDA---LDMDVLYRSGETH 57
Query: 549 GKY 557
KY
Sbjct: 58 QKY 60
>03_01_0524 +
3943581-3943610,3943889-3944050,3944403-3944637,
3945626-3945666,3946101-3946145,3947119-3947246,
3947446-3947554,3947641-3947694
Length = 267
Score = 29.9 bits (64), Expect = 2.1
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +3
Query: 609 RSGPYGMLFRPDNFVFGQSGAGNNWAKGH 695
++ PY + +++ +G SGAGN ++ GH
Sbjct: 64 QANPYWAMMHTNSYKYGYSGAGNYYSYGH 92
>07_01_1133 -
10550799-10551137,10552195-10552254,10555693-10557401,
10557534-10557616,10577533-10578074
Length = 910
Score = 29.5 bits (63), Expect = 2.8
Identities = 13/38 (34%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = +3
Query: 417 GNQIGSKFWEIISDEHG--VDTTGVYKGESDLQLDRIN 524
G+Q SKFW+ + +E G ++ + Y ++D Q +R+N
Sbjct: 540 GSQFTSKFWQKLQEEMGTHLNFSTAYHPQTDGQTERVN 577
>11_04_0054 - 12895574-12895840,12906985-12908121,12908274-12908591
Length = 573
Score = 29.1 bits (62), Expect = 3.7
Identities = 13/38 (34%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = +3
Query: 417 GNQIGSKFWEIISDEHG--VDTTGVYKGESDLQLDRIN 524
G+Q SKFW+ + +E G ++ + Y ++D Q +R+N
Sbjct: 331 GSQFTSKFWQKLQEELGTRLNFSTAYHPQTDGQTERVN 368
>11_01_0796 - 7000747-7001193
Length = 148
Score = 29.1 bits (62), Expect = 3.7
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2
Query: 569 RSRGSGAGHNGRGQIRTLRNAVPAR*LCLR 658
R RG G+G G G++R L + P+ LC+R
Sbjct: 12 RRRGRGSGWVGAGKLRPLTMSSPSPMLCMR 41
>09_04_0516 -
18246439-18246582,18246763-18246899,18247067-18247097,
18248097-18248194,18248222-18248291,18248704-18248835,
18249213-18249386
Length = 261
Score = 28.7 bits (61), Expect = 4.8
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = -1
Query: 303 QFYRNLSPFFLETLICNAPLIVNV 232
Q++ N + + LICN P+I+NV
Sbjct: 89 QYHHNFKSWAMNALICNNPIILNV 112
>09_01_0175 -
2509014-2509064,2509389-2509490,2509603-2509729,
2509852-2511564,2512335-2512424,2512533-2512801,
2513118-2513687,2513703-2514065
Length = 1094
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +3
Query: 453 SDEHGVDTT-GVYKGESDLQLDRINVYYNEASSGKYVPRAVLVDLEPGTMDAV 608
SD +G T G E++L +D ++ +NE ++ +V R V + GT+ AV
Sbjct: 448 SDMNGSSTVQGEPSDENELIVDDLDAIWNELNTSLHVSRYVTDSVMKGTISAV 500
>08_02_1160 -
24793708-24794796,24794888-24794951,24795028-24795146,
24795496-24795612,24796365-24796406,24797342-24797506,
24797806-24797898,24798190-24798291,24798360-24798501,
24799301-24799651,24799741-24799839,24800019-24800230,
24800394-24800429
Length = 876
Score = 28.7 bits (61), Expect = 4.8
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +1
Query: 553 NMSPVPFSWIWSRAQWTRSDQD 618
NMSP P S +WSR+ W R ++
Sbjct: 533 NMSPPPLS-LWSRSDWARKHKE 553
>11_01_0428 +
3279662-3279784,3281676-3281756,3281845-3281933,
3282011-3282085,3282211-3282269,3282316-3282414,
3282762-3283013,3283050-3283180
Length = 302
Score = 28.3 bits (60), Expect = 6.4
Identities = 18/50 (36%), Positives = 22/50 (44%)
Frame = +2
Query: 560 PPCRSRGSGAGHNGRGQIRTLRNAVPAR*LCLRSERRWQQLGQRTLHRGR 709
P R RG G G GRG R + N PA W++ G +RGR
Sbjct: 159 PTNRGRGRGGGRRGRG--RAMSNGPPA----YDYGEEWEEEGDYYNYRGR 202
>03_05_0615 + 26137785-26138593,26139307-26141368
Length = 956
Score = 28.3 bits (60), Expect = 6.4
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +3
Query: 225 LSLHLLSVVHYISVFPRKKAISSDKI 302
L HL + + Y+S+FP + I SDK+
Sbjct: 417 LPTHLKACLLYLSIFPEDQVIESDKL 442
>10_01_0300 - 3257584-3258825
Length = 413
Score = 27.9 bits (59), Expect = 8.5
Identities = 12/38 (31%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +3
Query: 417 GNQIGSKFWEIISDEHG--VDTTGVYKGESDLQLDRIN 524
G+Q S FW+ + +E G ++ + Y ++D Q +R+N
Sbjct: 121 GSQFTSNFWKKLQEEMGSKLNFSTAYHPQTDRQTERVN 158
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,197,877
Number of Sequences: 37544
Number of extensions: 430283
Number of successful extensions: 1338
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1276
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1333
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1851002996
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -