Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc28i21
(632 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X98001-1|CAA66638.1| 331|Homo sapiens geranylgeranyl transferas... 277 3e-74
CR456941-1|CAG33222.1| 331|Homo sapiens RABGGTB protein. 277 3e-74
BC020790-1|AAH20790.1| 331|Homo sapiens Rab geranylgeranyltrans... 277 3e-74
AL357314-5|CAI22393.1| 331|Homo sapiens Rab geranylgeranyltrans... 277 3e-74
AB209023-1|BAD92260.1| 320|Homo sapiens Rab geranylgeranyltrans... 277 3e-74
U49245-1|AAA91473.1| 331|Homo sapiens geranylgeranyl transferas... 275 1e-73
Y08201-1|CAA69383.1| 331|Homo sapiens rab geranylgeranyl transf... 273 3e-73
AL357314-4|CAI22392.1| 152|Homo sapiens Rab geranylgeranyltrans... 206 4e-53
L10414-1|AAA86286.1| 387|Homo sapiens farnesyl-protein transfer... 86 9e-17
L00635-1|AAA35854.1| 437|Homo sapiens farnesyl-protein transfer... 86 9e-17
BC020232-1|AAH20232.1| 437|Homo sapiens farnesyltransferase, CA... 86 9e-17
L25441-1|AAA35888.1| 377|Homo sapiens geranylgeranyltransferase... 46 8e-05
>X98001-1|CAA66638.1| 331|Homo sapiens geranylgeranyl transferase
II protein.
Length = 331
Score = 277 bits (678), Expect = 3e-74
Identities = 123/185 (66%), Positives = 149/185 (80%)
Frame = +1
Query: 76 MSFTTKDVVLKEDRPKTLLLQKHSDYLASYGLNKDDYEYCMTEYLRMSGIYWSLTAMELM 255
M KDV++K D P TLLL+KH+DY+ASYG KDDYEYCM+EYLRMSGIYW LT M+LM
Sbjct: 1 MGTPQKDVIIKSDAPDTLLLEKHADYIASYGSKKDDYEYCMSEYLRMSGIYWGLTVMDLM 60
Query: 256 GQSSRMPKEDIIEFITQCQDSESGGISASIGHDPHILYTLSAVQVLAMYDRLDAVDIEGI 435
GQ RM +E+I+ FI CQ E GGISASIGHDPH+LYTLSAVQ+L +YD ++ +D+ +
Sbjct: 61 GQLHRMNREEILAFIKSCQH-ECGGISASIGHDPHLLYTLSAVQILTLYDSINVIDVNKV 119
Query: 436 VRYIVSLQQEDGSFYGDKWGEIDTRFSFCAVMCLSLLQRLDAIDINKTVEFVLSCMNFDG 615
V Y+ LQ+EDGSF GD WGEIDTRFSFCAV L+LL +LDAI++ K +EFVLSCMNFDG
Sbjct: 120 VEYVKGLQKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMNFDG 179
Query: 616 GFGSK 630
GFG +
Sbjct: 180 GFGCR 184
Score = 37.9 bits (84), Expect = 0.030
Identities = 18/59 (30%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Frame = +1
Query: 226 YWSLTAMELMGQSSRMPKEDIIEFITQCQDSESGGISASIGH--DP-HILYTLSAVQVL 393
+W L +++++G+ + +E + FI CQD E+GG + G DP H L+ ++ + +L
Sbjct: 243 WWVLASLKIIGRLHWIDREKLRNFILACQDEETGGFADRPGDMVDPFHTLFGIAGLSLL 301
>CR456941-1|CAG33222.1| 331|Homo sapiens RABGGTB protein.
Length = 331
Score = 277 bits (678), Expect = 3e-74
Identities = 123/185 (66%), Positives = 149/185 (80%)
Frame = +1
Query: 76 MSFTTKDVVLKEDRPKTLLLQKHSDYLASYGLNKDDYEYCMTEYLRMSGIYWSLTAMELM 255
M KDV++K D P TLLL+KH+DY+ASYG KDDYEYCM+EYLRMSGIYW LT M+LM
Sbjct: 1 MGTPQKDVIIKSDAPDTLLLEKHADYIASYGSKKDDYEYCMSEYLRMSGIYWGLTVMDLM 60
Query: 256 GQSSRMPKEDIIEFITQCQDSESGGISASIGHDPHILYTLSAVQVLAMYDRLDAVDIEGI 435
GQ RM +E+I+ FI CQ E GGISASIGHDPH+LYTLSAVQ+L +YD ++ +D+ +
Sbjct: 61 GQLHRMNREEILAFIKSCQH-ECGGISASIGHDPHLLYTLSAVQILTLYDSINVIDVNKV 119
Query: 436 VRYIVSLQQEDGSFYGDKWGEIDTRFSFCAVMCLSLLQRLDAIDINKTVEFVLSCMNFDG 615
V Y+ LQ+EDGSF GD WGEIDTRFSFCAV L+LL +LDAI++ K +EFVLSCMNFDG
Sbjct: 120 VEYVKGLQKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMNFDG 179
Query: 616 GFGSK 630
GFG +
Sbjct: 180 GFGCR 184
Score = 37.9 bits (84), Expect = 0.030
Identities = 18/59 (30%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Frame = +1
Query: 226 YWSLTAMELMGQSSRMPKEDIIEFITQCQDSESGGISASIGH--DP-HILYTLSAVQVL 393
+W L +++++G+ + +E + FI CQD E+GG + G DP H L+ ++ + +L
Sbjct: 243 WWVLASLKIIGRLHWIDREKLRNFILACQDEETGGFADRPGDMVDPFHTLFGIAGLSLL 301
>BC020790-1|AAH20790.1| 331|Homo sapiens Rab
geranylgeranyltransferase, beta subunit protein.
Length = 331
Score = 277 bits (678), Expect = 3e-74
Identities = 123/185 (66%), Positives = 149/185 (80%)
Frame = +1
Query: 76 MSFTTKDVVLKEDRPKTLLLQKHSDYLASYGLNKDDYEYCMTEYLRMSGIYWSLTAMELM 255
M KDV++K D P TLLL+KH+DY+ASYG KDDYEYCM+EYLRMSGIYW LT M+LM
Sbjct: 1 MGTPQKDVIIKSDAPDTLLLEKHADYIASYGSKKDDYEYCMSEYLRMSGIYWGLTVMDLM 60
Query: 256 GQSSRMPKEDIIEFITQCQDSESGGISASIGHDPHILYTLSAVQVLAMYDRLDAVDIEGI 435
GQ RM +E+I+ FI CQ E GGISASIGHDPH+LYTLSAVQ+L +YD ++ +D+ +
Sbjct: 61 GQLHRMNREEILAFIKSCQH-ECGGISASIGHDPHLLYTLSAVQILTLYDSINVIDVNKV 119
Query: 436 VRYIVSLQQEDGSFYGDKWGEIDTRFSFCAVMCLSLLQRLDAIDINKTVEFVLSCMNFDG 615
V Y+ LQ+EDGSF GD WGEIDTRFSFCAV L+LL +LDAI++ K +EFVLSCMNFDG
Sbjct: 120 VEYVKGLQKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMNFDG 179
Query: 616 GFGSK 630
GFG +
Sbjct: 180 GFGCR 184
Score = 37.9 bits (84), Expect = 0.030
Identities = 18/59 (30%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Frame = +1
Query: 226 YWSLTAMELMGQSSRMPKEDIIEFITQCQDSESGGISASIGH--DP-HILYTLSAVQVL 393
+W L +++++G+ + +E + FI CQD E+GG + G DP H L+ ++ + +L
Sbjct: 243 WWVLASLKIIGRLHWIDREKLRNFILACQDEETGGFADRPGDMVDPFHTLFGIAGLSLL 301
>AL357314-5|CAI22393.1| 331|Homo sapiens Rab
geranylgeranyltransferase, beta subunit protein.
Length = 331
Score = 277 bits (678), Expect = 3e-74
Identities = 123/185 (66%), Positives = 149/185 (80%)
Frame = +1
Query: 76 MSFTTKDVVLKEDRPKTLLLQKHSDYLASYGLNKDDYEYCMTEYLRMSGIYWSLTAMELM 255
M KDV++K D P TLLL+KH+DY+ASYG KDDYEYCM+EYLRMSGIYW LT M+LM
Sbjct: 1 MGTPQKDVIIKSDAPDTLLLEKHADYIASYGSKKDDYEYCMSEYLRMSGIYWGLTVMDLM 60
Query: 256 GQSSRMPKEDIIEFITQCQDSESGGISASIGHDPHILYTLSAVQVLAMYDRLDAVDIEGI 435
GQ RM +E+I+ FI CQ E GGISASIGHDPH+LYTLSAVQ+L +YD ++ +D+ +
Sbjct: 61 GQLHRMNREEILAFIKSCQH-ECGGISASIGHDPHLLYTLSAVQILTLYDSINVIDVNKV 119
Query: 436 VRYIVSLQQEDGSFYGDKWGEIDTRFSFCAVMCLSLLQRLDAIDINKTVEFVLSCMNFDG 615
V Y+ LQ+EDGSF GD WGEIDTRFSFCAV L+LL +LDAI++ K +EFVLSCMNFDG
Sbjct: 120 VEYVKGLQKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMNFDG 179
Query: 616 GFGSK 630
GFG +
Sbjct: 180 GFGCR 184
Score = 37.9 bits (84), Expect = 0.030
Identities = 18/59 (30%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Frame = +1
Query: 226 YWSLTAMELMGQSSRMPKEDIIEFITQCQDSESGGISASIGH--DP-HILYTLSAVQVL 393
+W L +++++G+ + +E + FI CQD E+GG + G DP H L+ ++ + +L
Sbjct: 243 WWVLASLKIIGRLHWIDREKLRNFILACQDEETGGFADRPGDMVDPFHTLFGIAGLSLL 301
>AB209023-1|BAD92260.1| 320|Homo sapiens Rab
geranylgeranyltransferase, beta subunit variant protein.
Length = 320
Score = 277 bits (678), Expect = 3e-74
Identities = 123/185 (66%), Positives = 149/185 (80%)
Frame = +1
Query: 76 MSFTTKDVVLKEDRPKTLLLQKHSDYLASYGLNKDDYEYCMTEYLRMSGIYWSLTAMELM 255
M KDV++K D P TLLL+KH+DY+ASYG KDDYEYCM+EYLRMSGIYW LT M+LM
Sbjct: 1 MGTPQKDVIIKSDAPDTLLLEKHADYIASYGSKKDDYEYCMSEYLRMSGIYWGLTVMDLM 60
Query: 256 GQSSRMPKEDIIEFITQCQDSESGGISASIGHDPHILYTLSAVQVLAMYDRLDAVDIEGI 435
GQ RM +E+I+ FI CQ E GGISASIGHDPH+LYTLSAVQ+L +YD ++ +D+ +
Sbjct: 61 GQLHRMNREEILAFIKSCQH-ECGGISASIGHDPHLLYTLSAVQILTLYDSINVIDVNKV 119
Query: 436 VRYIVSLQQEDGSFYGDKWGEIDTRFSFCAVMCLSLLQRLDAIDINKTVEFVLSCMNFDG 615
V Y+ LQ+EDGSF GD WGEIDTRFSFCAV L+LL +LDAI++ K +EFVLSCMNFDG
Sbjct: 120 VEYVKGLQKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMNFDG 179
Query: 616 GFGSK 630
GFG +
Sbjct: 180 GFGCR 184
Score = 38.3 bits (85), Expect = 0.022
Identities = 16/48 (33%), Positives = 29/48 (60%)
Frame = +1
Query: 226 YWSLTAMELMGQSSRMPKEDIIEFITQCQDSESGGISASIGHDPHILY 369
+W L +++++G+ + +E + FI CQD E+GG + G D H +Y
Sbjct: 243 WWVLASLKIIGRLHWIDREKLRNFILACQDEETGGFADRPG-DMHFIY 289
>U49245-1|AAA91473.1| 331|Homo sapiens geranylgeranyl transferase
type II beta-subunit protein.
Length = 331
Score = 275 bits (674), Expect = 1e-73
Identities = 122/185 (65%), Positives = 148/185 (80%)
Frame = +1
Query: 76 MSFTTKDVVLKEDRPKTLLLQKHSDYLASYGLNKDDYEYCMTEYLRMSGIYWSLTAMELM 255
M KDV++K D P TLLL+KH+DY+ASYG KDDYEYCM+EYLRMSGIYW LT M+LM
Sbjct: 1 MGTPQKDVIIKSDAPDTLLLEKHADYIASYGSKKDDYEYCMSEYLRMSGIYWGLTVMDLM 60
Query: 256 GQSSRMPKEDIIEFITQCQDSESGGISASIGHDPHILYTLSAVQVLAMYDRLDAVDIEGI 435
GQ RM +E+I+ FI CQ E GGISASIGHDPH+LYTLSAVQ+L +YD ++ +D+ +
Sbjct: 61 GQLHRMNREEILAFIKSCQH-ECGGISASIGHDPHLLYTLSAVQILTLYDSINVIDVNKV 119
Query: 436 VRYIVSLQQEDGSFYGDKWGEIDTRFSFCAVMCLSLLQRLDAIDINKTVEFVLSCMNFDG 615
V Y+ LQ+EDGSF GD WGEIDTRFSFCAV +LL +LDAI++ K +EFVLSCMNFDG
Sbjct: 120 VEYVKGLQKEDGSFAGDIWGEIDTRFSFCAVATFALLGKLDAINVEKAIEFVLSCMNFDG 179
Query: 616 GFGSK 630
GFG +
Sbjct: 180 GFGCR 184
Score = 37.9 bits (84), Expect = 0.030
Identities = 18/59 (30%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Frame = +1
Query: 226 YWSLTAMELMGQSSRMPKEDIIEFITQCQDSESGGISASIGH--DP-HILYTLSAVQVL 393
+W L +++++G+ + +E + FI CQD E+GG + G DP H L+ ++ + +L
Sbjct: 243 WWVLASLKIIGRLHWIDREKLRNFILACQDEETGGFADRPGDMVDPFHTLFGIAGLSLL 301
>Y08201-1|CAA69383.1| 331|Homo sapiens rab geranylgeranyl
transferase protein.
Length = 331
Score = 273 bits (670), Expect = 3e-73
Identities = 122/185 (65%), Positives = 148/185 (80%)
Frame = +1
Query: 76 MSFTTKDVVLKEDRPKTLLLQKHSDYLASYGLNKDDYEYCMTEYLRMSGIYWSLTAMELM 255
M KDV++K D P TLLL+KH+DY+ASYG KDDYEYCM+EYLRMSGIYW LT M+LM
Sbjct: 1 MGTPQKDVIIKSDAPDTLLLEKHADYIASYGSKKDDYEYCMSEYLRMSGIYWGLTVMDLM 60
Query: 256 GQSSRMPKEDIIEFITQCQDSESGGISASIGHDPHILYTLSAVQVLAMYDRLDAVDIEGI 435
GQ RM +E+I+ FI CQ E GGISASIGHDPH+LYTLSAVQ+L +YD ++ +D+ +
Sbjct: 61 GQLHRMNREEILAFIKSCQH-ECGGISASIGHDPHLLYTLSAVQILTLYDSINVIDVNKV 119
Query: 436 VRYIVSLQQEDGSFYGDKWGEIDTRFSFCAVMCLSLLQRLDAIDINKTVEFVLSCMNFDG 615
V Y+ LQ+EDGSF GD WGEIDTRFSFCAV L+LL +LDAI++ K +EFVLSCMN DG
Sbjct: 120 VEYVKGLQKEDGSFAGDIWGEIDTRFSFCAVATLALLGKLDAINVEKAIEFVLSCMNSDG 179
Query: 616 GFGSK 630
GFG +
Sbjct: 180 GFGCR 184
Score = 37.9 bits (84), Expect = 0.030
Identities = 18/59 (30%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Frame = +1
Query: 226 YWSLTAMELMGQSSRMPKEDIIEFITQCQDSESGGISASIGH--DP-HILYTLSAVQVL 393
+W L +++++G+ + +E + FI CQD E+GG + G DP H L+ ++ + +L
Sbjct: 243 WWVLASLKIIGRLHWIDREKLRNFILACQDEETGGFADRPGDMVDPFHTLFGIAGLSLL 301
>AL357314-4|CAI22392.1| 152|Homo sapiens Rab
geranylgeranyltransferase, beta subunit protein.
Length = 152
Score = 206 bits (504), Expect = 4e-53
Identities = 93/147 (63%), Positives = 114/147 (77%)
Frame = +1
Query: 76 MSFTTKDVVLKEDRPKTLLLQKHSDYLASYGLNKDDYEYCMTEYLRMSGIYWSLTAMELM 255
M KDV++K D P TLLL+KH+DY+ASYG KDDYEYCM+EYLRMSGIYW LT M+LM
Sbjct: 1 MGTPQKDVIIKSDAPDTLLLEKHADYIASYGSKKDDYEYCMSEYLRMSGIYWGLTVMDLM 60
Query: 256 GQSSRMPKEDIIEFITQCQDSESGGISASIGHDPHILYTLSAVQVLAMYDRLDAVDIEGI 435
GQ RM +E+I+ FI CQ E GGISASIGHDPH+LYTLSAVQ+L +YD ++ +D+ +
Sbjct: 61 GQLHRMNREEILAFIKSCQ-HECGGISASIGHDPHLLYTLSAVQILTLYDSINVIDVNKV 119
Query: 436 VRYIVSLQQEDGSFYGDKWGEIDTRFS 516
V Y+ LQ+EDGSF GD WG + RFS
Sbjct: 120 VEYVKGLQKEDGSFAGDIWGNV--RFS 144
Score = 41.1 bits (92), Expect = 0.003
Identities = 23/78 (29%), Positives = 38/78 (48%)
Frame = +1
Query: 388 VLAMYDRLDAVDIEGIVRYIVSLQQEDGSFYGDKWGEIDTRFSFCAVMCLSLLQRLDAID 567
V+ + +L ++ E I+ +I S Q E G + ++ AV L+L ++ ID
Sbjct: 56 VMDLMGQLHRMNREEILAFIKSCQHECGGISASIGHDPHLLYTLSAVQILTLYDSINVID 115
Query: 568 INKTVEFVLSCMNFDGGF 621
+NK VE+V DG F
Sbjct: 116 VNKVVEYVKGLQKEDGSF 133
>L10414-1|AAA86286.1| 387|Homo sapiens farnesyl-protein transferase
beta-subunit protein.
Length = 387
Score = 86.2 bits (204), Expect = 9e-17
Identities = 54/167 (32%), Positives = 83/167 (49%), Gaps = 4/167 (2%)
Frame = +1
Query: 136 QKHSDYLASYGLNKDDYEYCMTEYLRMSGIYWSLTAMELMGQS-SRMPKEDIIEFITQCQ 312
+KH YL GL + Y + R YW L ++EL+ + ++ D+ +F+ CQ
Sbjct: 26 EKHFHYLKR-GLRQLTDAYECLDASRPWLCYWILHSLELLDEPIPQIVATDVCQFLELCQ 84
Query: 313 DSESGGISASIGHDPHILYTLSAVQVLAMYDRLDAVDI---EGIVRYIVSLQQEDGSFYG 483
E GG G PH+ T +AV L + +A DI E +++Y+ SL+Q DGSF
Sbjct: 85 SPE-GGFGGGPGQYPHLAPTYAAVNALCIIGTEEAYDIINREKLLQYLYSLKQPDGSFLM 143
Query: 484 DKWGEIDTRFSFCAVMCLSLLQRLDAIDINKTVEFVLSCMNFDGGFG 624
GE+D R ++CA SL + T E++ C N++GG G
Sbjct: 144 HVGGEVDVRSAYCAASVASLTNIITPDLFEGTAEWIARCQNWEGGIG 190
Score = 39.5 bits (88), Expect = 0.010
Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Frame = +1
Query: 280 EDIIEFITQCQDSESGGISASIGHDPHILYTLSAVQVLAMYDRLDAVDIEGIVRYIVSLQ 459
E E+I +CQ+ E GGI G + H YT + L + R +++++ +++++ S Q
Sbjct: 173 EGTAEWIARCQNWE-GGIGGVPGMEAHGGYTFCGLAALVILKRERSLNLKSLLQWVTSRQ 231
Query: 460 Q-EDGSFYGDKWGEIDTRFSFCAVMCLSLLQR 552
+G F G +D +SF L LL R
Sbjct: 232 MLFEGGFQGRCNKLVDGCYSFWQAGLLPLLHR 263
>L00635-1|AAA35854.1| 437|Homo sapiens farnesyl-protein transferase
beta-subunit protein.
Length = 437
Score = 86.2 bits (204), Expect = 9e-17
Identities = 54/167 (32%), Positives = 83/167 (49%), Gaps = 4/167 (2%)
Frame = +1
Query: 136 QKHSDYLASYGLNKDDYEYCMTEYLRMSGIYWSLTAMELMGQS-SRMPKEDIIEFITQCQ 312
+KH YL GL + Y + R YW L ++EL+ + ++ D+ +F+ CQ
Sbjct: 76 EKHFHYLKR-GLRQLTDAYECLDASRPWLCYWILHSLELLDEPIPQIVATDVCQFLELCQ 134
Query: 313 DSESGGISASIGHDPHILYTLSAVQVLAMYDRLDAVDI---EGIVRYIVSLQQEDGSFYG 483
E GG G PH+ T +AV L + +A DI E +++Y+ SL+Q DGSF
Sbjct: 135 SPE-GGFGGGPGQYPHLAPTYAAVNALCIIGTEEAYDIINREKLLQYLYSLKQPDGSFLM 193
Query: 484 DKWGEIDTRFSFCAVMCLSLLQRLDAIDINKTVEFVLSCMNFDGGFG 624
GE+D R ++CA SL + T E++ C N++GG G
Sbjct: 194 HVGGEVDVRSAYCAASVASLTNIITPDLFEGTAEWIARCQNWEGGIG 240
Score = 40.7 bits (91), Expect = 0.004
Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Frame = +1
Query: 280 EDIIEFITQCQDSESGGISASIGHDPHILYTLSAVQVLAMYDRLDAVDIEGIVRYIVSLQ 459
E E+I +CQ+ E GGI G + H YT + L + R +++++ +++++ S Q
Sbjct: 223 EGTAEWIARCQNWE-GGIGGVPGMEAHGGYTFCGLAALVILKRERSLNLKSLLQWVTSRQ 281
Query: 460 QE-DGSFYGDKWGEIDTRFSFCAVMCLSLLQR 552
+G F G +D +SF L LL R
Sbjct: 282 MRFEGGFQGRCNKLVDGCYSFWQAGLLPLLHR 313
>BC020232-1|AAH20232.1| 437|Homo sapiens farnesyltransferase, CAAX
box, beta protein.
Length = 437
Score = 86.2 bits (204), Expect = 9e-17
Identities = 54/167 (32%), Positives = 83/167 (49%), Gaps = 4/167 (2%)
Frame = +1
Query: 136 QKHSDYLASYGLNKDDYEYCMTEYLRMSGIYWSLTAMELMGQS-SRMPKEDIIEFITQCQ 312
+KH YL GL + Y + R YW L ++EL+ + ++ D+ +F+ CQ
Sbjct: 76 EKHFHYLKR-GLRQLTDAYECLDASRPWLCYWILHSLELLDEPIPQIVATDVCQFLELCQ 134
Query: 313 DSESGGISASIGHDPHILYTLSAVQVLAMYDRLDAVDI---EGIVRYIVSLQQEDGSFYG 483
E GG G PH+ T +AV L + +A DI E +++Y+ SL+Q DGSF
Sbjct: 135 SPE-GGFGGGPGQYPHLAPTYAAVNALCIIGTEEAYDIINREKLLQYLYSLKQPDGSFLM 193
Query: 484 DKWGEIDTRFSFCAVMCLSLLQRLDAIDINKTVEFVLSCMNFDGGFG 624
GE+D R ++CA SL + T E++ C N++GG G
Sbjct: 194 HVGGEVDVRSAYCAASVASLTNIITPDLFEGTAEWIARCQNWEGGIG 240
Score = 40.7 bits (91), Expect = 0.004
Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Frame = +1
Query: 280 EDIIEFITQCQDSESGGISASIGHDPHILYTLSAVQVLAMYDRLDAVDIEGIVRYIVSLQ 459
E E+I +CQ+ E GGI G + H YT + L + R +++++ +++++ S Q
Sbjct: 223 EGTAEWIARCQNWE-GGIGGVPGMEAHGGYTFCGLAALVILKRERSLNLKSLLQWVTSRQ 281
Query: 460 QE-DGSFYGDKWGEIDTRFSFCAVMCLSLLQR 552
+G F G +D +SF L LL R
Sbjct: 282 MRFEGGFQGRCNKLVDGCYSFWQAGLLPLLHR 313
>L25441-1|AAA35888.1| 377|Homo sapiens geranylgeranyltransferase
type I beta-subunit protein.
Length = 377
Score = 46.4 bits (105), Expect = 8e-05
Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Frame = +1
Query: 358 HILYTLSAVQVLAMY-DRLDAVDIEGIVRYIVSLQQEDGSFYGDKWG-EIDTRFSFCAVM 531
HI T + + L + D L V+ E + + +LQ EDGSF G E D RF +CA
Sbjct: 121 HIAMTYTGLSCLVILGDDLSRVNKEACLAGLRALQLEDGSFCAVPEGSENDMRFVYCASC 180
Query: 532 CLSLLQRLDAIDINKTVEFVLSCMNFDGG 618
+L +D+ K + ++ M++D G
Sbjct: 181 ICYMLNNWSGMDMKKAITYIRRSMSYDNG 209
Score = 33.5 bits (73), Expect = 0.64
Identities = 32/141 (22%), Positives = 63/141 (44%), Gaps = 5/141 (3%)
Frame = +1
Query: 214 MSGIYWSLTAMELMGQSSRMPKEDIIEFITQCQDSESGGISASIGHDPHILYTLSAVQVL 393
M +Y + ++ S M + I +I + S G++ G + H T + L
Sbjct: 172 MRFVYCASCICYMLNNWSGMDMKKAITYIRRSM-SYDNGLAQGAGLESHGGSTFCGIASL 230
Query: 394 AMYDRLDAV----DIEGIVRYIVSLQQEDGSFYGDKWGEIDTRFSFCAVMCLSLLQRLDA 561
+ +L+ V ++ I R+ + ++Q++G ++G +DT +SF L LL+
Sbjct: 231 CLMGKLEEVFSEKELNRIKRWCI-MRQQNG-YHGRPNKPVDTCYSFWVGATLKLLKIFQY 288
Query: 562 IDINKTVEFVLSCMN-FDGGF 621
+ K ++LS + GGF
Sbjct: 289 TNFEKNRNYILSTQDRLVGGF 309
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,913,126
Number of Sequences: 237096
Number of extensions: 1673744
Number of successful extensions: 3366
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 3266
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3334
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6916500330
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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