Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc28i19
         (351 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC133677-1|AAI33678.1|  194|Homo sapiens KRTAP10-3 protein protein.    33   0.34 
AB076350-1|BAD01537.1|  221|Homo sapiens keratin associated prot...    33   0.34 
BC125049-1|AAI25050.1|  401|Homo sapiens keratin associated prot...    30   2.4  
BC125048-1|AAI25049.1|  401|Homo sapiens keratin associated prot...    30   2.4  
AB076351-1|BAD01538.1|  401|Homo sapiens keratin associated prot...    30   2.4  
AB076348-1|BAD01535.1|  255|Homo sapiens keratin associated prot...    29   3.1  
AB076353-1|BAD01540.1|  365|Homo sapiens keratin associated prot...    29   5.5  

>BC133677-1|AAI33678.1|  194|Homo sapiens KRTAP10-3 protein protein.
          Length = 194

 Score = 32.7 bits (71), Expect = 0.34
 Identities = 18/64 (28%), Positives = 30/64 (46%)
 Frame = -2

Query: 230 SCAPRCTTRRSCKIGFTNTCCPSAPRRR*ACSKTPKRR*SLIPLPSRAISMRPRRCCTPK 51
           SC P C  + SC+      CC S+P ++  C     +    +P+  + +  +P  CC P 
Sbjct: 74  SCTPSCCQQSSCQ----PACCTSSPCQQACCVPVCCKPVCCVPVCCKPVCCKP-ICCVP- 127

Query: 50  GICS 39
            +CS
Sbjct: 128 -VCS 130


>AB076350-1|BAD01537.1|  221|Homo sapiens keratin associated protein
           protein.
          Length = 221

 Score = 32.7 bits (71), Expect = 0.34
 Identities = 18/64 (28%), Positives = 30/64 (46%)
 Frame = -2

Query: 230 SCAPRCTTRRSCKIGFTNTCCPSAPRRR*ACSKTPKRR*SLIPLPSRAISMRPRRCCTPK 51
           SC P C  + SC+      CC S+P ++  C     +    +P+  + +  +P  CC P 
Sbjct: 74  SCTPSCCQQSSCQ----PACCTSSPCQQACCVPVCCKPVCCVPVCCKPVCCKP-ICCVP- 127

Query: 50  GICS 39
            +CS
Sbjct: 128 -VCS 130


>BC125049-1|AAI25050.1|  401|Homo sapiens keratin associated protein
           10-4 protein.
          Length = 401

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 16/65 (24%), Positives = 30/65 (46%), Gaps = 4/65 (6%)
 Frame = -2

Query: 236 SCSCAPRCTTRRSCKIGFTNTCCPSAPRRR----*ACSKTPKRR*SLIPLPSRAISMRPR 69
           S  C P       C+ G T++C PS  ++       C+ +P ++   +P+  + +  +P 
Sbjct: 64  SSPCCPVTCEPSPCQSGCTSSCTPSCCQQSSCQLACCASSPCQQACCVPVCCKTVCCKP- 122

Query: 68  RCCTP 54
            CC P
Sbjct: 123 VCCVP 127


>BC125048-1|AAI25049.1|  401|Homo sapiens keratin associated protein
           10-4 protein.
          Length = 401

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 16/65 (24%), Positives = 30/65 (46%), Gaps = 4/65 (6%)
 Frame = -2

Query: 236 SCSCAPRCTTRRSCKIGFTNTCCPSAPRRR----*ACSKTPKRR*SLIPLPSRAISMRPR 69
           S  C P       C+ G T++C PS  ++       C+ +P ++   +P+  + +  +P 
Sbjct: 64  SSPCCPVTCEPSPCQSGCTSSCTPSCCQQSSCQLACCASSPCQQACCVPVCCKTVCCKP- 122

Query: 68  RCCTP 54
            CC P
Sbjct: 123 VCCVP 127


>AB076351-1|BAD01538.1|  401|Homo sapiens keratin associated protein
           protein.
          Length = 401

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 16/65 (24%), Positives = 30/65 (46%), Gaps = 4/65 (6%)
 Frame = -2

Query: 236 SCSCAPRCTTRRSCKIGFTNTCCPSAPRRR----*ACSKTPKRR*SLIPLPSRAISMRPR 69
           S  C P       C+ G T++C PS  ++       C+ +P ++   +P+  + +  +P 
Sbjct: 64  SSPCCPVTCEPSPCQSGCTSSCTPSCCQQSSCQLACCASSPCQQACCVPVCCKTVCCKP- 122

Query: 68  RCCTP 54
            CC P
Sbjct: 123 VCCVP 127


>AB076348-1|BAD01535.1|  255|Homo sapiens keratin associated protein
           protein.
          Length = 255

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 20/73 (27%), Positives = 32/73 (43%)
 Frame = -2

Query: 230 SCAPRCTTRRSCKIGFTNTCCPSAPRRR*ACSKTPKRR*SLIPLPSRAISMRPRRCCTPK 51
           SC P C  + SC+      CC S+P ++  C     +    +P+   A S   +  C P 
Sbjct: 74  SCTPSCCQQSSCQ----PACCTSSPCQQACCVPVCCKPVCCVPVCCGASSCCQQSSCQP- 128

Query: 50  GICSRSARLQT*R 12
             C+ S+  Q+ R
Sbjct: 129 ACCASSSCQQSCR 141


>AB076353-1|BAD01540.1|  365|Homo sapiens keratin associated protein
           protein.
          Length = 365

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 17/77 (22%), Positives = 33/77 (42%), Gaps = 8/77 (10%)
 Frame = -2

Query: 236 SCSCAPRCTTRRSCKIGFTNTCCPSAPRRR----*ACSKTPKRR*SLIPLPSRAISMRP- 72
           S  C P       C+ G T++C PS  ++       C+ +P ++   +P+  + +  +P 
Sbjct: 64  SSPCCPVTCEPSPCQSGCTSSCTPSCCQQSSCQLACCASSPCQQACCVPVCCKTVCCKPV 123

Query: 71  ---RRCCTPKGICSRSA 30
                CC     C +S+
Sbjct: 124 CCVSVCCGDSSCCQQSS 140



 Score = 27.9 bits (59), Expect = 9.5
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = -2

Query: 230 SCAPRCTTRRSCKIGFTNTCCPSAPRRR*AC 138
           SC P C  + SC+     TCC S+P ++  C
Sbjct: 203 SCTPSCCQQSSCQ----PTCCTSSPCQQACC 229


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 53,274,858
Number of Sequences: 237096
Number of extensions: 1192555
Number of successful extensions: 6523
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 6439
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6518
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 2084089752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)