Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc28i10
         (604 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC110537-1|AAI10538.1|  819|Homo sapiens IWS1 homolog (S. cerevi...    30   5.4  
BC110536-1|AAI10537.1|  819|Homo sapiens IWS1 homolog (S. cerevi...    30   5.4  
AK056881-1|BAB71301.1|  494|Homo sapiens protein ( Homo sapiens ...    30   5.4  
AK027561-1|BAB55198.1|  819|Homo sapiens protein ( Homo sapiens ...    30   5.4  
AK000868-1|BAA91402.1|  489|Homo sapiens protein ( Homo sapiens ...    30   5.4  

>BC110537-1|AAI10538.1|  819|Homo sapiens IWS1 homolog (S.
           cerevisiae) protein.
          Length = 819

 Score = 30.3 bits (65), Expect = 5.4
 Identities = 18/40 (45%), Positives = 23/40 (57%)
 Frame = -3

Query: 317 DTVDVVWRGLVLDRLSDFFCFLQDTAMSFSSRRRRSEDPG 198
           D+ D + RG  +D LSDF   LQ    S S +RRR+ D G
Sbjct: 512 DSDDNIKRGKHMDFLSDFEMMLQ-RKKSMSGKRRRNRDGG 550


>BC110536-1|AAI10537.1|  819|Homo sapiens IWS1 homolog (S.
           cerevisiae) protein.
          Length = 819

 Score = 30.3 bits (65), Expect = 5.4
 Identities = 18/40 (45%), Positives = 23/40 (57%)
 Frame = -3

Query: 317 DTVDVVWRGLVLDRLSDFFCFLQDTAMSFSSRRRRSEDPG 198
           D+ D + RG  +D LSDF   LQ    S S +RRR+ D G
Sbjct: 512 DSDDNIKRGKHMDFLSDFEMMLQ-RKKSMSGKRRRNRDGG 550


>AK056881-1|BAB71301.1|  494|Homo sapiens protein ( Homo sapiens
           cDNA FLJ32319 fis, clone PROST2003472. ).
          Length = 494

 Score = 30.3 bits (65), Expect = 5.4
 Identities = 18/40 (45%), Positives = 23/40 (57%)
 Frame = -3

Query: 317 DTVDVVWRGLVLDRLSDFFCFLQDTAMSFSSRRRRSEDPG 198
           D+ D + RG  +D LSDF   LQ    S S +RRR+ D G
Sbjct: 187 DSDDNIKRGKHMDFLSDFEMMLQ-RKKSMSGKRRRNRDGG 225


>AK027561-1|BAB55198.1|  819|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14655 fis, clone NT2RP2002292. ).
          Length = 819

 Score = 30.3 bits (65), Expect = 5.4
 Identities = 18/40 (45%), Positives = 23/40 (57%)
 Frame = -3

Query: 317 DTVDVVWRGLVLDRLSDFFCFLQDTAMSFSSRRRRSEDPG 198
           D+ D + RG  +D LSDF   LQ    S S +RRR+ D G
Sbjct: 512 DSDDNIKRGKHMDFLSDFEMMLQ-RKKSMSGKRRRNRDGG 550


>AK000868-1|BAA91402.1|  489|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10006 fis, clone HEMBA1000168, weakly similar to
           CYLICIN I. ).
          Length = 489

 Score = 30.3 bits (65), Expect = 5.4
 Identities = 18/40 (45%), Positives = 23/40 (57%)
 Frame = -3

Query: 317 DTVDVVWRGLVLDRLSDFFCFLQDTAMSFSSRRRRSEDPG 198
           D+ D + RG  +D LSDF   LQ    S S +RRR+ D G
Sbjct: 305 DSDDNIKRGKHMDFLSDFGMMLQ-RKKSMSGKRRRNRDGG 343


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,353,973
Number of Sequences: 237096
Number of extensions: 1957000
Number of successful extensions: 15137
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8056
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15122
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6354183230
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)