Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc28i09
         (644 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81573-2|CAB04626.1|  294|Caenorhabditis elegans Hypothetical pr...    28   6.5  
Z81122-5|CAB03357.1|  579|Caenorhabditis elegans Hypothetical pr...    28   6.5  
Z81064-2|CAB02963.1|  259|Caenorhabditis elegans Hypothetical pr...    28   6.5  
U39851-14|AAF99871.2|  354|Caenorhabditis elegans Hypothetical p...    28   6.5  
U39851-13|AAL13325.1|  456|Caenorhabditis elegans Hypothetical p...    28   6.5  
Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical pr...    27   8.6  
Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical pr...    27   8.6  
U39471-1|AAA80132.4|  461|Caenorhabditis elegans Intestinal acid...    27   8.6  
AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein...    27   8.6  

>Z81573-2|CAB04626.1|  294|Caenorhabditis elegans Hypothetical
           protein M02G9.3 protein.
          Length = 294

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 14/33 (42%), Positives = 15/33 (45%)
 Frame = -2

Query: 316 GCRDT*RCRTASVLKNCDPTCLFTGLCNCRTIK 218
           GCR T  C + S L  C P C  T    C T K
Sbjct: 233 GCRST--CSSTSTLSVCIPACQQTCRSTCSTAK 263


>Z81122-5|CAB03357.1|  579|Caenorhabditis elegans Hypothetical
           protein T13F2.6 protein.
          Length = 579

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = +1

Query: 535 NGSKLPSSLKTLIIVFNTSCVKIIELTTPGNWWYRL 642
           NGS    S K  I V +  C+ ++   TPGN W +L
Sbjct: 69  NGSFSFDSSKKQIHVKSVKCIYMLPKATPGNKWAQL 104


>Z81064-2|CAB02963.1|  259|Caenorhabditis elegans Hypothetical
           protein F16B12.2 protein.
          Length = 259

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
 Frame = -3

Query: 408 RRKASFGCDDVSSCWRKRMAATGDGNSRSVSAVG-THKGAERR 283
           +R A + C D   C  K + +  DG SR   AVG T K  ER+
Sbjct: 168 KRIARWDCSDEGYCQNKGVCSFVDGISRCRCAVGFTGKHCERK 210


>U39851-14|AAF99871.2|  354|Caenorhabditis elegans Hypothetical
           protein C23G10.1a protein.
          Length = 354

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 16/59 (27%), Positives = 29/59 (49%)
 Frame = -1

Query: 440 QKLRIGSPIFAGEKLVSVVTTFHRVGENEWLLPVTGIQEASRLSGHIKVPNGVRVEKLR 264
           Q ++ G   FAG+KLV+V +  H +        V  +     +S  +  P  +RVE+++
Sbjct: 283 QVVQDGYEFFAGKKLVTVFSAPHYMQSFTNSAAVCKVSAGLEVSFEVLKPEDIRVEEIK 341


>U39851-13|AAL13325.1|  456|Caenorhabditis elegans Hypothetical
           protein C23G10.1b protein.
          Length = 456

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 16/59 (27%), Positives = 29/59 (49%)
 Frame = -1

Query: 440 QKLRIGSPIFAGEKLVSVVTTFHRVGENEWLLPVTGIQEASRLSGHIKVPNGVRVEKLR 264
           Q ++ G   FAG+KLV+V +  H +        V  +     +S  +  P  +RVE+++
Sbjct: 385 QVVQDGYEFFAGKKLVTVFSAPHYMQSFTNSAAVCKVSAGLEVSFEVLKPEDIRVEEIK 443


>Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical protein
            F15D3.1a protein.
          Length = 3674

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 14/49 (28%), Positives = 24/49 (48%)
 Frame = -1

Query: 275  EKLRPNMSVYGTVQLPYDKIKRHALEQENKTPNALESCVLFYKDSEIRI 129
            E+L+ N +  G     +DK+ +HA+++  +    L  C L    SE  I
Sbjct: 2901 ERLKKNWAELGIEVESWDKLVQHAMQRLQELERNLAECQLHLTSSENEI 2949


>Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical protein
            F15D3.1a protein.
          Length = 3674

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 14/49 (28%), Positives = 24/49 (48%)
 Frame = -1

Query: 275  EKLRPNMSVYGTVQLPYDKIKRHALEQENKTPNALESCVLFYKDSEIRI 129
            E+L+ N +  G     +DK+ +HA+++  +    L  C L    SE  I
Sbjct: 2901 ERLKKNWAELGIEVESWDKLVQHAMQRLQELERNLAECQLHLTSSENEI 2949


>U39471-1|AAA80132.4|  461|Caenorhabditis elegans Intestinal acid
           phosphatase protein4 protein.
          Length = 461

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +3

Query: 288 VRHLYVSRQPRRFLNSRHR*QPFVFANTMKRR 383
           +R  YV+ QP +FLN+R+  Q     +T K R
Sbjct: 82  LRARYVNGQPYKFLNTRYNQQEIFVRSTDKNR 113


>AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein
            protein.
          Length = 3674

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 14/49 (28%), Positives = 24/49 (48%)
 Frame = -1

Query: 275  EKLRPNMSVYGTVQLPYDKIKRHALEQENKTPNALESCVLFYKDSEIRI 129
            E+L+ N +  G     +DK+ +HA+++  +    L  C L    SE  I
Sbjct: 2901 ERLKKNWAELGIEVESWDKLVQHAMQRLQELERNLAECQLHLTSSENEI 2949


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,377,891
Number of Sequences: 27780
Number of extensions: 343657
Number of successful extensions: 906
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 884
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 906
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1423653030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)