Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc28i06
         (607 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BX537424-1|CAD97666.1| 1539|Homo sapiens hypothetical protein pr...    30   5.5  
BC032227-1|AAH32227.1| 1205|Homo sapiens ZFYVE16 protein protein.      30   5.5  
BC030808-1|AAH30808.1|  809|Homo sapiens ZFYVE16 protein protein.      30   5.5  
AF434817-1|AAL30772.1| 1539|Homo sapiens endofin protein.              30   5.5  
AB002303-1|BAA20764.2| 1547|Homo sapiens KIAA0305 protein.             30   5.5  
DQ217660-1|ABB29845.1| 1759|Homo sapiens castor long variant pro...    30   7.3  
AL139423-2|CAI22570.1|  706|Homo sapiens castor zinc finger 1 pr...    30   7.3  

>BX537424-1|CAD97666.1| 1539|Homo sapiens hypothetical protein
           protein.
          Length = 1539

 Score = 30.3 bits (65), Expect = 5.5
 Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
 Frame = +2

Query: 407 NDSDRCSEDFDRISDDGDLREDLQKSI--AECYRSDSNFSSQATSDITNDEE 556
           +D D+  +DF++  D+ D  +D+Q +     C  S    SSQ TS +  D+E
Sbjct: 10  SDLDKLLDDFEQNPDEQDYLQDVQNAYDSNHCSVSSELASSQRTSLLPKDQE 61


>BC032227-1|AAH32227.1| 1205|Homo sapiens ZFYVE16 protein protein.
          Length = 1205

 Score = 30.3 bits (65), Expect = 5.5
 Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
 Frame = +2

Query: 407 NDSDRCSEDFDRISDDGDLREDLQKSI--AECYRSDSNFSSQATSDITNDEE 556
           +D D+  +DF++  D+ D  +D+Q +     C  S    SSQ TS +  D+E
Sbjct: 10  SDLDKLLDDFEQNPDEQDYLQDVQNAYDSNHCSVSSELASSQRTSLLPKDQE 61


>BC030808-1|AAH30808.1|  809|Homo sapiens ZFYVE16 protein protein.
          Length = 809

 Score = 30.3 bits (65), Expect = 5.5
 Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
 Frame = +2

Query: 407 NDSDRCSEDFDRISDDGDLREDLQKSI--AECYRSDSNFSSQATSDITNDEE 556
           +D D+  +DF++  D+ D  +D+Q +     C  S    SSQ TS +  D+E
Sbjct: 10  SDLDKLLDDFEQNPDEQDYLQDVQNAYDSNHCSVSSELASSQRTSLLPKDQE 61


>AF434817-1|AAL30772.1| 1539|Homo sapiens endofin protein.
          Length = 1539

 Score = 30.3 bits (65), Expect = 5.5
 Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
 Frame = +2

Query: 407 NDSDRCSEDFDRISDDGDLREDLQKSI--AECYRSDSNFSSQATSDITNDEE 556
           +D D+  +DF++  D+ D  +D+Q +     C  S    SSQ TS +  D+E
Sbjct: 10  SDLDKLLDDFEQNPDEQDYLQDVQNAYDSNHCSVSSELASSQRTSLLPKDQE 61


>AB002303-1|BAA20764.2| 1547|Homo sapiens KIAA0305 protein.
          Length = 1547

 Score = 30.3 bits (65), Expect = 5.5
 Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
 Frame = +2

Query: 407 NDSDRCSEDFDRISDDGDLREDLQKSI--AECYRSDSNFSSQATSDITNDEE 556
           +D D+  +DF++  D+ D  +D+Q +     C  S    SSQ TS +  D+E
Sbjct: 18  SDLDKLLDDFEQNPDEQDYLQDVQNAYDSNHCSVSSELASSQRTSLLPKDQE 69


>DQ217660-1|ABB29845.1| 1759|Homo sapiens castor long variant protein.
          Length = 1759

 Score = 29.9 bits (64), Expect = 7.3
 Identities = 14/31 (45%), Positives = 18/31 (58%)
 Frame = +2

Query: 401  EGNDSDRCSEDFDRISDDGDLREDLQKSIAE 493
            E +D D   ED D   DD DLR D ++S+ E
Sbjct: 1695 EDDDEDDDDEDDDEDDDDEDLRTDSEESLPE 1725


>AL139423-2|CAI22570.1|  706|Homo sapiens castor zinc finger 1
           protein.
          Length = 706

 Score = 29.9 bits (64), Expect = 7.3
 Identities = 14/31 (45%), Positives = 18/31 (58%)
 Frame = +2

Query: 401 EGNDSDRCSEDFDRISDDGDLREDLQKSIAE 493
           E +D D   ED D   DD DLR D ++S+ E
Sbjct: 642 EDDDEDDDDEDDDEDDDDEDLRTDSEESLPE 672


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,569,308
Number of Sequences: 237096
Number of extensions: 1214352
Number of successful extensions: 2594
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2498
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2594
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6410414940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)