Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc28i06
         (607 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-4071|AAF56668.1|  554|Drosophila melanogaster CG5815-PB...    31   1.6  
AE014297-4070|AAN14396.1|  581|Drosophila melanogaster CG5815-PA...    31   1.6  
BT025907-1|ABG02151.1|  270|Drosophila melanogaster IP05105p pro...    30   2.1  
AE014296-2928|AAN11696.1|  135|Drosophila melanogaster CG32184-P...    30   2.1  
AE014298-1863|AAF48240.1| 1547|Drosophila melanogaster CG1903-PB...    29   4.9  
AE013599-3815|AAF47164.2| 2291|Drosophila melanogaster CG11290-P...    29   6.5  
U95760-1|AAB54001.1| 1547|Drosophila melanogaster Sno protein.         28   8.6  

>AE014297-4071|AAF56668.1|  554|Drosophila melanogaster CG5815-PB,
           isoform B protein.
          Length = 554

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 11/38 (28%), Positives = 19/38 (50%)
 Frame = +2

Query: 395 VFEGNDSDRCSEDFDRISDDGDLREDLQKSIAECYRSD 508
           +++ +D D    + D   DDGD  ED+   I + +  D
Sbjct: 484 IYDDDDEDEYDSELDDFIDDGDCEEDISSHIRDIFGYD 521


>AE014297-4070|AAN14396.1|  581|Drosophila melanogaster CG5815-PA,
           isoform A protein.
          Length = 581

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 11/38 (28%), Positives = 19/38 (50%)
 Frame = +2

Query: 395 VFEGNDSDRCSEDFDRISDDGDLREDLQKSIAECYRSD 508
           +++ +D D    + D   DDGD  ED+   I + +  D
Sbjct: 484 IYDDDDEDEYDSELDDFIDDGDCEEDISSHIRDIFGYD 521


>BT025907-1|ABG02151.1|  270|Drosophila melanogaster IP05105p
           protein.
          Length = 270

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 15/51 (29%), Positives = 26/51 (50%)
 Frame = +2

Query: 413 SDRCSEDFDRISDDGDLREDLQKSIAECYRSDSNFSSQATSDITNDEEFQA 565
           SD  SED D ++++G+   DLQ + A C        +    +  ++EE+ A
Sbjct: 47  SDESSEDED-VAENGEEMVDLQNNQANCLHCGELHDNDEAEEYVDEEEYNA 96


>AE014296-2928|AAN11696.1|  135|Drosophila melanogaster CG32184-PA
           protein.
          Length = 135

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 15/51 (29%), Positives = 26/51 (50%)
 Frame = +2

Query: 413 SDRCSEDFDRISDDGDLREDLQKSIAECYRSDSNFSSQATSDITNDEEFQA 565
           SD  SED D ++++G+   DLQ + A C        +    +  ++EE+ A
Sbjct: 33  SDESSEDED-VAENGEEMVDLQNNQANCLHCGELHDNDEAEEYVDEEEYNA 82


>AE014298-1863|AAF48240.1| 1547|Drosophila melanogaster CG1903-PB,
           isoform B protein.
          Length = 1547

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
 Frame = +2

Query: 401 EGNDSDRCSEDFDRISDDGDLREDLQKSIAECYRSDSN-FSSQATSDI 541
           E N  D    D D   +D D+  D Q+S+A    SD N F S + SDI
Sbjct: 849 EANSDDDLKSDIDDEDEDHDVDSD-QRSVASDASSDFNPFFSGSDSDI 895


>AE013599-3815|AAF47164.2| 2291|Drosophila melanogaster CG11290-PA
           protein.
          Length = 2291

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
 Frame = +2

Query: 401 EGNDSDRCSEDFDRISDDGDLREDLQKSIAECYRSDSNFSSQATSDITN-DEEF 559
           E  D D   +D +R  DD D  E           SDS+ SS+++SD +  D+E+
Sbjct: 412 ESEDEDDEDDDRNRNGDDNDQDESTSSDSCTSSSSDSD-SSESSSDTSEWDDEY 464


>U95760-1|AAB54001.1| 1547|Drosophila melanogaster Sno protein.
          Length = 1547

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
 Frame = +2

Query: 401 EGNDSDRCSEDFDRISDDGDLREDLQKSIAECYRSDSN-FSSQATSDI 541
           E N  D    D D   +D D+  D Q+S+A    SD N F S + SDI
Sbjct: 849 ETNSDDDLKSDIDDEDEDHDVDSD-QRSVASDASSDFNPFFSGSDSDI 895


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,417,200
Number of Sequences: 53049
Number of extensions: 414674
Number of successful extensions: 1124
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1076
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1122
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2482967880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)