Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc28h20
         (361 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY119194-1|AAM51054.1|  528|Drosophila melanogaster SD11991p pro...    27   7.2  
AE014134-787|AAF50969.1|  528|Drosophila melanogaster CG11926-PA...    27   7.2  
AY094764-1|AAM11117.1|  105|Drosophila melanogaster GM09417p pro...    27   9.5  
AY071456-1|AAL49078.1|  105|Drosophila melanogaster RE53796p pro...    27   9.5  
AE014296-3375|AAF51611.2|  105|Drosophila melanogaster CG5969-PA...    27   9.5  

>AY119194-1|AAM51054.1|  528|Drosophila melanogaster SD11991p
           protein.
          Length = 528

 Score = 27.1 bits (57), Expect = 7.2
 Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
 Frame = +1

Query: 256 KKHLTTYVPQNCYRCKNI*F-VLMLNNK-NALIGKKK 360
           +  +T+ +  NC + KN+ F VL+ NNK  AL+  KK
Sbjct: 271 RSQITSAIQSNCSKIKNLVFAVLIANNKLIALVRMKK 307


>AE014134-787|AAF50969.1|  528|Drosophila melanogaster CG11926-PA
           protein.
          Length = 528

 Score = 27.1 bits (57), Expect = 7.2
 Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
 Frame = +1

Query: 256 KKHLTTYVPQNCYRCKNI*F-VLMLNNK-NALIGKKK 360
           +  +T+ +  NC + KN+ F VL+ NNK  AL+  KK
Sbjct: 271 RSQITSAIQSNCSKIKNLVFAVLIANNKLIALVRMKK 307


>AY094764-1|AAM11117.1|  105|Drosophila melanogaster GM09417p
           protein.
          Length = 105

 Score = 26.6 bits (56), Expect = 9.5
 Identities = 13/50 (26%), Positives = 29/50 (58%)
 Frame = -1

Query: 313 IIYFYIYNNFVVHKWLDVSFEIKINYINYISITRL*KHSYITIIIHRLTF 164
           ++ F++   FV+ ++LD+S E+K+N  + +    +  H  + + I+R  F
Sbjct: 47  VLTFFVLKGFVLDQFLDIS-EVKVNIASAVGAV-VALHIALGLYIYRAYF 94


>AY071456-1|AAL49078.1|  105|Drosophila melanogaster RE53796p
           protein.
          Length = 105

 Score = 26.6 bits (56), Expect = 9.5
 Identities = 13/50 (26%), Positives = 29/50 (58%)
 Frame = -1

Query: 313 IIYFYIYNNFVVHKWLDVSFEIKINYINYISITRL*KHSYITIIIHRLTF 164
           ++ F++   FV+ ++LD+S E+K+N  + +    +  H  + + I+R  F
Sbjct: 47  VLTFFVLKGFVLDQFLDIS-EVKVNIASAVGAV-VALHIALGLYIYRAYF 94


>AE014296-3375|AAF51611.2|  105|Drosophila melanogaster CG5969-PA
           protein.
          Length = 105

 Score = 26.6 bits (56), Expect = 9.5
 Identities = 13/50 (26%), Positives = 29/50 (58%)
 Frame = -1

Query: 313 IIYFYIYNNFVVHKWLDVSFEIKINYINYISITRL*KHSYITIIIHRLTF 164
           ++ F++   FV+ ++LD+S E+K+N  + +    +  H  + + I+R  F
Sbjct: 47  VLTFFVLKGFVLDQFLDIS-EVKVNIASAVGAV-VALHIALGLYIYRAYF 94


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,791,745
Number of Sequences: 53049
Number of extensions: 203349
Number of successful extensions: 305
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 294
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 305
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 901135692
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)