Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc28h18
         (241 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-301|AAX52653.1|  386|Drosophila melanogaster CG31931-PA...    32   0.12 
BT011033-1|AAR30193.1|  755|Drosophila melanogaster RE44811p pro...    27   2.6  
AY075543-1|AAL68350.1|  159|Drosophila melanogaster RH34376p pro...    27   2.6  
AE014134-3303|AAF53934.3|  159|Drosophila melanogaster CG31676-P...    27   2.6  
AE014134-818|AAF52182.2|  755|Drosophila melanogaster CG3753-PA ...    27   2.6  
AY113195-1|AAM29200.1|  576|Drosophila melanogaster AT02481p pro...    27   4.6  
AE014298-2467|AAF48658.2|  575|Drosophila melanogaster CG32572-P...    27   4.6  
AE014297-2301|AAN13729.1|  160|Drosophila melanogaster CG31263-P...    26   8.1  

>AE014134-301|AAX52653.1|  386|Drosophila melanogaster CG31931-PA
           protein.
          Length = 386

 Score = 31.9 bits (69), Expect = 0.12
 Identities = 14/30 (46%), Positives = 18/30 (60%)
 Frame = -2

Query: 99  FVPSLLSDVWNVWLLIVACSVTSAACQ*TA 10
           F  SLL ++W+ WL I AC +T  A   TA
Sbjct: 288 FPNSLLINIWDFWLCIAACDLTEKAGDETA 317


>BT011033-1|AAR30193.1|  755|Drosophila melanogaster RE44811p
           protein.
          Length = 755

 Score = 27.5 bits (58), Expect = 2.6
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = +1

Query: 67  IPHIRQ*RRNEAISSPALVWLSTVTKSCLQDF 162
           +P + +  R   +  PALVW +  TK  L  F
Sbjct: 462 LPQLAEKNRETVVLDPALVWTNAETKETLDAF 493


>AY075543-1|AAL68350.1|  159|Drosophila melanogaster RH34376p
           protein.
          Length = 159

 Score = 27.5 bits (58), Expect = 2.6
 Identities = 11/37 (29%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
 Frame = -3

Query: 161 KSCRHDFVTVESQTRAGDEIASFLR--YCRMCGMSGC 57
           +SC ++ +   +   A D+ +S+++  YCR C   GC
Sbjct: 93  RSCFYEDMDDSADKCANDQTSSYIKTVYCRTCTTDGC 129


>AE014134-3303|AAF53934.3|  159|Drosophila melanogaster CG31676-PA
           protein.
          Length = 159

 Score = 27.5 bits (58), Expect = 2.6
 Identities = 11/37 (29%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
 Frame = -3

Query: 161 KSCRHDFVTVESQTRAGDEIASFLR--YCRMCGMSGC 57
           +SC ++ +   +   A D+ +S+++  YCR C   GC
Sbjct: 93  RSCFYEDMDDSADKCANDQTSSYIKTVYCRTCTTDGC 129


>AE014134-818|AAF52182.2|  755|Drosophila melanogaster CG3753-PA
           protein.
          Length = 755

 Score = 27.5 bits (58), Expect = 2.6
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = +1

Query: 67  IPHIRQ*RRNEAISSPALVWLSTVTKSCLQDF 162
           +P + +  R   +  PALVW +  TK  L  F
Sbjct: 462 LPQLAEKNRETVVLDPALVWTNAETKETLDAF 493


>AY113195-1|AAM29200.1|  576|Drosophila melanogaster AT02481p
           protein.
          Length = 576

 Score = 26.6 bits (56), Expect = 4.6
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +3

Query: 18  IDKPPKLQNTLLLTARHSTHPTVAKERSDF 107
           + +PPK + +     R+  HPT+A  RS F
Sbjct: 118 VKQPPKERRSGTQRTRNQQHPTLATSRSGF 147


>AE014298-2467|AAF48658.2|  575|Drosophila melanogaster CG32572-PA
           protein.
          Length = 575

 Score = 26.6 bits (56), Expect = 4.6
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +3

Query: 18  IDKPPKLQNTLLLTARHSTHPTVAKERSDF 107
           + +PPK + +     R+  HPT+A  RS F
Sbjct: 118 VKQPPKERRSGTQRTRNQQHPTLATSRSGF 147


>AE014297-2301|AAN13729.1|  160|Drosophila melanogaster CG31263-PA
           protein.
          Length = 160

 Score = 25.8 bits (54), Expect = 8.1
 Identities = 13/41 (31%), Positives = 22/41 (53%)
 Frame = -2

Query: 129 KPNEGRRRNRFVPSLLSDVWNVWLLIVACSVTSAACQ*TAP 7
           +P EG +++R   S L  V +    +  C + S++CQ T P
Sbjct: 114 QPAEGSQKSREPESGLLPVADCQFPVARCPLPSSSCQCTGP 154


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,416,614
Number of Sequences: 53049
Number of extensions: 140879
Number of successful extensions: 401
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 396
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 401
length of database: 24,988,368
effective HSP length: 59
effective length of database: 21,858,477
effective search space used: 437169540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)