Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc28h17
(717 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 345 4e-96
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 337 1e-93
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 303 2e-83
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 285 4e-78
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 231 7e-62
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 134 9e-33
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 99 3e-22
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 72 1e-13
SPBC18A7.01 ||SPBC4F6.19c|X-Pro dipeptidase |Schizosaccharomyces... 33 0.054
SPBC16D10.07c |sir2||Sir2 family histone deacetylase Sir2|Schizo... 30 0.38
SPAC23H3.02c |ini1||RING finger-like protein Ini1|Schizosaccharo... 27 2.0
SPAC1F7.01c |spt6|SPAC694.07c|transcription elongation factor Sp... 27 2.7
SPBC947.10 |||ubiquitin-protein ligase E3 |Schizosaccharomyces p... 27 3.5
SPBC646.06c |agn2||glucan endo-1,3-alpha-glucosidase Agn2|Schizo... 26 4.7
SPBC887.19 |rft1||human RFT1 ortholog |Schizosaccharomyces pombe... 26 6.2
SPAC167.05 ||SPAC57A7.01|Usp |Schizosaccharomyces pombe|chr 1|||... 25 8.2
SPCC4B3.08 |||C-terminal domain kinase I |Schizosaccharomyces po... 25 8.2
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 345 bits (848), Expect = 4e-96
Identities = 162/196 (82%), Positives = 179/196 (91%)
Frame = +1
Query: 130 AIGIDLGTTYSCVGVWQHGNVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVALNPNN 309
+IGIDLGTTYSCVG + + VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA+NP+N
Sbjct: 4 SIGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPHN 63
Query: 310 TVFDAKRLIGRKFDDPKIQQDMKHWPFKVINDCGKPKIQIEFKGETKRFAPEEISSMVLT 489
T+FDAKRLIGRKFDDP++Q DMKHWPFKVI+ GKP +Q+E+KGETK F PEEISSMVL
Sbjct: 64 TIFDAKRLIGRKFDDPEVQSDMKHWPFKVISKDGKPVLQVEYKGETKTFTPEEISSMVLM 123
Query: 490 KMKETAEAYLGSTVRDAVVTVPAYFNDSQRQATKDAGAIAGLNVLRIINEPTAAALAYGL 669
KM+ETAEAYLG V DAVVTVPAYFNDSQRQATKDAG IAGLNVLRIINEPTAAA+AYGL
Sbjct: 124 KMRETAEAYLGGKVTDAVVTVPAYFNDSQRQATKDAGLIAGLNVLRIINEPTAAAIAYGL 183
Query: 670 DKNLKGERNVLIFDLG 717
D++ +GE NVLIFDLG
Sbjct: 184 DRSNQGESNVLIFDLG 199
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 337 bits (828), Expect = 1e-93
Identities = 159/196 (81%), Positives = 177/196 (90%)
Frame = +1
Query: 130 AIGIDLGTTYSCVGVWQHGNVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVALNPNN 309
+IGIDLGTTYSCVG + + VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA+NP+N
Sbjct: 4 SIGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPHN 63
Query: 310 TVFDAKRLIGRKFDDPKIQQDMKHWPFKVINDCGKPKIQIEFKGETKRFAPEEISSMVLT 489
T+FDAKRLIGR+F+DP++Q DMKHWPFKVI GKP IQ+EFKGETK F PEEISSMVL
Sbjct: 64 TIFDAKRLIGRRFNDPEVQSDMKHWPFKVIEKDGKPLIQVEFKGETKTFTPEEISSMVLL 123
Query: 490 KMKETAEAYLGSTVRDAVVTVPAYFNDSQRQATKDAGAIAGLNVLRIINEPTAAALAYGL 669
KM+E+AEA+LG V DAVVTVPAYFNDSQRQATKDAG IAGLNVLRIINEPTAAA+AYGL
Sbjct: 124 KMRESAEAFLGGKVTDAVVTVPAYFNDSQRQATKDAGLIAGLNVLRIINEPTAAAIAYGL 183
Query: 670 DKNLKGERNVLIFDLG 717
D++ + E NVLIFDLG
Sbjct: 184 DRSNQHETNVLIFDLG 199
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 303 bits (744), Expect = 2e-83
Identities = 142/196 (72%), Positives = 166/196 (84%)
Frame = +1
Query: 130 AIGIDLGTTYSCVGVWQHGNVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVALNPNN 309
AIGIDLGTTYSCV VW+ NVEII NDQG RTTPS+VAFT+TERL+GDAAKNQ A+NP N
Sbjct: 8 AIGIDLGTTYSCVAVWETANVEIIPNDQGARTTPSFVAFTETERLVGDAAKNQAAMNPRN 67
Query: 310 TVFDAKRLIGRKFDDPKIQQDMKHWPFKVINDCGKPKIQIEFKGETKRFAPEEISSMVLT 489
TVFDAKRLIGR+++DP+ Q+D+KHWPFKVI++ G P I++ + GE K+F +EIS+MVLT
Sbjct: 68 TVFDAKRLIGRRYEDPETQKDIKHWPFKVIDNNGIPTIEVNYLGEKKQFTAQEISAMVLT 127
Query: 490 KMKETAEAYLGSTVRDAVVTVPAYFNDSQRQATKDAGAIAGLNVLRIINEPTAAALAYGL 669
KMKE +EA L V AV+TVPAYF+DSQR ATKDAGAIAGLNVLRIINEPTAAA+AYGL
Sbjct: 128 KMKEISEAKLNKRVEKAVITVPAYFSDSQRAATKDAGAIAGLNVLRIINEPTAAAIAYGL 187
Query: 670 DKNLKGERNVLIFDLG 717
D +NVLIFDLG
Sbjct: 188 DAKSDKPKNVLIFDLG 203
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 285 bits (699), Expect = 4e-78
Identities = 130/195 (66%), Positives = 163/195 (83%)
Frame = +1
Query: 133 IGIDLGTTYSCVGVWQHGNVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVALNPNNT 312
IGIDLGTTYSCV V ++G VEIIANDQGNR TPSYVAFT+ ERL+G+AAKNQ NP NT
Sbjct: 38 IGIDLGTTYSCVAVMKNGRVEIIANDQGNRITPSYVAFTEDERLVGEAAKNQAPSNPENT 97
Query: 313 VFDAKRLIGRKFDDPKIQQDMKHWPFKVINDCGKPKIQIEFKGETKRFAPEEISSMVLTK 492
+FD KRLIGRKFD+ + +D+K +PF ++ND +P +++ G+ K+F PEEIS+M+L+K
Sbjct: 98 IFDIKRLIGRKFDEKTMAKDIKSFPFHIVNDKNRPLVEVNVGGKKKKFTPEEISAMILSK 157
Query: 493 MKETAEAYLGSTVRDAVVTVPAYFNDSQRQATKDAGAIAGLNVLRIINEPTAAALAYGLD 672
MK+TAEAYLG V AVVTVPAYFND+QRQATKDAG IAGLNV+RI+NEPTAAA+AYGLD
Sbjct: 158 MKQTAEAYLGKPVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVIRIVNEPTAAAIAYGLD 217
Query: 673 KNLKGERNVLIFDLG 717
K E++++++DLG
Sbjct: 218 KT-DTEKHIVVYDLG 231
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 231 bits (565), Expect = 7e-62
Identities = 115/200 (57%), Positives = 148/200 (74%), Gaps = 1/200 (0%)
Frame = +1
Query: 121 KMPAIGIDLGTTYSCVGVWQHGNVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAL 297
K P IGIDLGTT SC+ + + ++IAN +G RTTPS VAFT D ERL+G +AK Q +
Sbjct: 49 KGPVIGIDLGTTTSCLAIMEGQTPKVIANAEGTRTTPSVVAFTKDGERLVGVSAKRQAVI 108
Query: 298 NPNNTVFDAKRLIGRKFDDPKIQQDMKHWPFKVINDCGKPKIQIEFKGETKRFAPEEISS 477
NP NT F KRLIGR+F +P++Q+D+K P+K++ +E +G+T ++P +I
Sbjct: 109 NPENTFFATKRLIGRRFKEPEVQRDIKEVPYKIVEH-SNGDAWLEARGKT--YSPSQIGG 165
Query: 478 MVLTKMKETAEAYLGSTVRDAVVTVPAYFNDSQRQATKDAGAIAGLNVLRIINEPTAAAL 657
+L+KM+ETA YLG V++AVVTVPAYFNDSQRQATK AGAIAGLNVLR++NEPTAAAL
Sbjct: 166 FILSKMRETASTYLGKDVKNAVVTVPAYFNDSQRQATKAAGAIAGLNVLRVVNEPTAAAL 225
Query: 658 AYGLDKNLKGERNVLIFDLG 717
AYGLDK K + V +FDLG
Sbjct: 226 AYGLDK--KNDAIVAVFDLG 243
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 134 bits (325), Expect = 9e-33
Identities = 74/200 (37%), Positives = 118/200 (59%), Gaps = 5/200 (2%)
Frame = +1
Query: 133 IGIDLGTTYSCVGVWQHGNVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVALNPNNT 312
+GID G + + + V ++ +++I N+ NR+TPS V++ + R +G+AAK+ A N NT
Sbjct: 8 VGIDFGNSKTVIAVARNRAIDVIVNEVSNRSTPSLVSYGERSRFLGEAAKSAEASNFRNT 67
Query: 313 VFDAKRLIGRKFDDPKIQQDMKHW-PFKVINDCGKPKIQIEFKGETKRFAPEEISSMVLT 489
V KRL GR +DDP+I+ ++ K+ G ++++ E F+ ++ + T
Sbjct: 68 VGSLKRLAGRTYDDPEIKDIESNFISAKLTEVDGFVGAKVQYLNEETAFSNIQLIAAYFT 127
Query: 490 KMKETAEAYLGSTVRDAVVTVPAYFNDSQRQATKDAGAIAGLNVLRIINEPTAAALAYGL 669
K+K AEA L +V D V+++PA+F D QR+A +A IAGLN LR++N+ AAAL YG+
Sbjct: 128 KIKAIAEAELIGSVSDVVISIPAWFTDIQRRALLEAANIAGLNPLRLMNDNAAAALTYGI 187
Query: 670 DK----NLKGERNVLIFDLG 717
K + R V I D G
Sbjct: 188 TKTDLPEPESPRRVAIVDFG 207
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 99 bits (238), Expect = 3e-22
Identities = 59/199 (29%), Positives = 105/199 (52%), Gaps = 4/199 (2%)
Frame = +1
Query: 133 IGIDLGTTYSCVGVWQHGNVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVALNPNNT 312
IGI G S + + G +++AN++GNR PS +++ + G A+ Q+ N +N+
Sbjct: 27 IGISFGNQNSSIAFNRDGKTDVLANEEGNRQIPSILSYHGDQEYHGVQARGQLVRNADNS 86
Query: 313 VFDAKRLIGRKFDDPKIQQ-DMKHWPFKVINDCG-KPKIQIEFKGETKR--FAPEEISSM 480
V + + L+G+ D+ + P V G K +Q + + + K E S
Sbjct: 87 VTNFRDLLGKSHDELTLHHCHYSANPVNVEGQIGFKITVQEDEESDPKEKILTAHEASVR 146
Query: 481 VLTKMKETAEAYLGSTVRDAVVTVPAYFNDSQRQATKDAGAIAGLNVLRIINEPTAAALA 660
L ++ E+AE +LG+ V V++VP YF D+QR+A + A AGL VL++I++P A LA
Sbjct: 147 HLRRLTESAEDFLGTKVNGCVMSVPVYFTDAQRKALESAANEAGLPVLQLIHDPAAVILA 206
Query: 661 YGLDKNLKGERNVLIFDLG 717
+ + ++ V++ + G
Sbjct: 207 LMYSEEVLIDKTVVVANFG 225
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 71.7 bits (168), Expect = 1e-13
Identities = 52/204 (25%), Positives = 93/204 (45%), Gaps = 4/204 (1%)
Frame = +1
Query: 118 FKMPAIGIDLGTTYSCVGVWQHG-NVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 294
F + ID GT ++ + + G +EI+ R S VAF ER+ G A N
Sbjct: 20 FASSVLAIDYGTEWTKAALIKPGIPLEIVLTKDTRRKEQSAVAFKGNERIFGVDASNLAT 79
Query: 295 LNPNNTVFDAKRLIGRK-FDDPKIQQDMKHWPFKVINDCGKPKIQIEFK-GETKRFAPEE 468
P +++ + K L+ + +Q+ +P + + + I F + + ++ EE
Sbjct: 80 RFPAHSIRNVKELLDTAGLESVLVQKYQSSYPAIQLVENEETTSGISFVISDEENYSLEE 139
Query: 469 ISSMVLTKMKETAEAYLGSTVRDAVVTVPAYFNDSQRQATKDAGAIAGLNVLRIINEPTA 648
I +M + AE + D V+TVP +FN+ QR +A I +VL +I++ A
Sbjct: 140 IIAMTMEHYISLAEEMAHEKITDLVLTVPPHFNELQRSILLEAARILNKHVLALIDDNVA 199
Query: 649 AALAYGLDKNLKGERNV-LIFDLG 717
A+ Y L ++ + +I+D G
Sbjct: 200 VAIEYSLSRSFSTDPTYNIIYDSG 223
>SPBC18A7.01 ||SPBC4F6.19c|X-Pro dipeptidase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 451
Score = 32.7 bits (71), Expect = 0.054
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = +1
Query: 238 VAFTDTERLIGDAAKNQVALNPNNTVFDAKRLIGRKFDDPKIQQDMKHWPFKVIND-CGK 414
+ F+D E GD A L P + AK L+G+ D I D P++V+ D G
Sbjct: 125 IIFSDDEPYPGDVASRIYFLVPKFELPRAKELVGKNIDAKYITWDEDENPYQVLYDRLGP 184
Query: 415 PKIQIE 432
K+ I+
Sbjct: 185 LKLMID 190
>SPBC16D10.07c |sir2||Sir2 family histone deacetylase
Sir2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 475
Score = 29.9 bits (64), Expect = 0.38
Identities = 10/37 (27%), Positives = 22/37 (59%)
Frame = +1
Query: 343 KFDDPKIQQDMKHWPFKVINDCGKPKIQIEFKGETKR 453
K D ++ +D+++ N+CGKP +++ G+ K+
Sbjct: 280 KVDGSELYEDIRNQRVSYCNECGKPPLKLRRVGQNKK 316
>SPAC23H3.02c |ini1||RING finger-like protein
Ini1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 117
Score = 27.5 bits (58), Expect = 2.0
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = -1
Query: 564 EVCRNCDYRIPHCTSQIRFRRLLHFCQHHA 475
++C CD + P C S +R L+ C A
Sbjct: 21 KLCERCDEKCPICDSHVRPTTLVRICDECA 50
>SPAC1F7.01c |spt6|SPAC694.07c|transcription elongation factor
Spt6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1365
Score = 27.1 bits (57), Expect = 2.7
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +1
Query: 595 AGAIAGLNVLRIINEPTAAALAYGLDKNLKGE 690
A AI +NV R+ N A L G+D N+K +
Sbjct: 1049 ADAIVPVNVRRVTNRFVAVKLDCGIDGNIKAD 1080
>SPBC947.10 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 676
Score = 26.6 bits (56), Expect = 3.5
Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 6/54 (11%)
Frame = -2
Query: 419 FGLPQSLITLK---GQCFMSC*ILGSSN---FLPISLFASNTVLLGFKATWFLA 276
F +PQ + +K + F ILG+S +LP+++F + ++LGF +F A
Sbjct: 504 FWIPQIIQNVKQGTSRSFTWTYILGASVLRLYLPLAIFIDSELILGFPPKYFFA 557
>SPBC646.06c |agn2||glucan endo-1,3-alpha-glucosidase
Agn2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 433
Score = 26.2 bits (55), Expect = 4.7
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +1
Query: 601 AIAGLNVLRIINEPTAAALAYGLDKNLKGERNVLIFD 711
A AGL + +I+N T A YG N+ G +V++++
Sbjct: 388 AAAGLPLFQILNGTTVIAQGYG-PLNILGNNSVVLYN 423
>SPBC887.19 |rft1||human RFT1 ortholog |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 527
Score = 25.8 bits (54), Expect = 6.2
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -2
Query: 665 PYASAAAVGSLMMRSTFRP 609
PYA A+ GSL+ R FRP
Sbjct: 277 PYALASNYGSLLARIVFRP 295
>SPAC167.05 ||SPAC57A7.01|Usp |Schizosaccharomyces pombe|chr
1|||Manual
Length = 601
Score = 25.4 bits (53), Expect = 8.2
Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 3/77 (3%)
Frame = +1
Query: 349 DDPKIQQDMKHWPFKVINDCGKPKIQIEFKGETKRFAPEEISSMVLTKMK---ETAEAYL 519
DD K Q + PKI + E R A E+ S LTK K +T+ Y
Sbjct: 285 DDEKKQPSKSEKTSSMSVSIKPPKIIRKGSKEQNRIAKEKASGAPLTKSKSHNDTSTEYD 344
Query: 520 GSTVRDAVVTVPAYFND 570
+++R + + PA+ ND
Sbjct: 345 SNSLRRS-RSNPAFAND 360
>SPCC4B3.08 |||C-terminal domain kinase I |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 218
Score = 25.4 bits (53), Expect = 8.2
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +1
Query: 532 RDAVVTVPAYFNDSQRQATKDAGAIAGLNVLRIINE 639
+DA+ TV A+ S+ T +GAI+ ++L+ I E
Sbjct: 128 KDAMATVEAHEQASKSGDTSTSGAISKNDILKRIEE 163
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,623,926
Number of Sequences: 5004
Number of extensions: 54235
Number of successful extensions: 200
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 189
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 195
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 335201398
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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