Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc28h16
         (296 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    22   5.6  
AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    21   7.4  
AY341174-1|AAR13738.1|  280|Anopheles gambiae fibrinogen protein.      21   7.4  
AY341173-1|AAR13737.1|  280|Anopheles gambiae fibrinogen protein.      21   7.4  
AY341172-1|AAR13736.1|  280|Anopheles gambiae fibrinogen protein.      21   7.4  
AY341171-1|AAR13735.1|  280|Anopheles gambiae fibrinogen protein.      21   7.4  
AY341170-1|AAR13734.1|  280|Anopheles gambiae fibrinogen protein.      21   7.4  
AY341169-1|AAR13733.1|  280|Anopheles gambiae fibrinogen protein.      21   7.4  
AY341168-1|AAR13732.1|  280|Anopheles gambiae fibrinogen protein.      21   7.4  

>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
           channel alpha1 subunit protein.
          Length = 1893

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 12/37 (32%), Positives = 17/37 (45%)
 Frame = -2

Query: 226 ILNSFSGLISIWQRLTNFXTFTSILTKQNIKRKMNFN 116
           +LNS   + S+   L  F    ++L  Q    K NFN
Sbjct: 605 LLNSIQSIASLLLLLFLFIVIFALLGMQVFGGKFNFN 641


>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 6/19 (31%), Positives = 12/19 (63%)
 Frame = -1

Query: 62  KCIYFLTSMTRIKKHARRH 6
           +C Y    ++++K+H R H
Sbjct: 216 ECDYASVELSKLKRHIRTH 234


>AY341174-1|AAR13738.1|  280|Anopheles gambiae fibrinogen protein.
          Length = 280

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 10/35 (28%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
 Frame = -2

Query: 274 PF-SXCSRSDFPYFYLVILNSFSGLISIWQRLTNF 173
           PF + C ++ F   +LVI + F G +  ++  T +
Sbjct: 131 PFPAHCEQTKFGGGWLVIQHRFKGALDFFRNWTEY 165


>AY341173-1|AAR13737.1|  280|Anopheles gambiae fibrinogen protein.
          Length = 280

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 10/35 (28%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
 Frame = -2

Query: 274 PF-SXCSRSDFPYFYLVILNSFSGLISIWQRLTNF 173
           PF + C ++ F   +LVI + F G +  ++  T +
Sbjct: 131 PFPAHCEQTKFGGGWLVIQHRFKGALDFFRNWTEY 165


>AY341172-1|AAR13736.1|  280|Anopheles gambiae fibrinogen protein.
          Length = 280

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 10/35 (28%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
 Frame = -2

Query: 274 PF-SXCSRSDFPYFYLVILNSFSGLISIWQRLTNF 173
           PF + C ++ F   +LVI + F G +  ++  T +
Sbjct: 131 PFPAHCEQTKFGGGWLVIQHRFKGALDFFRNWTEY 165


>AY341171-1|AAR13735.1|  280|Anopheles gambiae fibrinogen protein.
          Length = 280

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 10/35 (28%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
 Frame = -2

Query: 274 PF-SXCSRSDFPYFYLVILNSFSGLISIWQRLTNF 173
           PF + C ++ F   +LVI + F G +  ++  T +
Sbjct: 131 PFPAHCEQTKFGGGWLVIQHRFKGALDFFRNWTEY 165


>AY341170-1|AAR13734.1|  280|Anopheles gambiae fibrinogen protein.
          Length = 280

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 10/35 (28%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
 Frame = -2

Query: 274 PF-SXCSRSDFPYFYLVILNSFSGLISIWQRLTNF 173
           PF + C ++ F   +LVI + F G +  ++  T +
Sbjct: 131 PFPAHCEQTKFGGGWLVIQHRFKGALDFFRNWTEY 165


>AY341169-1|AAR13733.1|  280|Anopheles gambiae fibrinogen protein.
          Length = 280

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 10/35 (28%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
 Frame = -2

Query: 274 PF-SXCSRSDFPYFYLVILNSFSGLISIWQRLTNF 173
           PF + C ++ F   +LVI + F G +  ++  T +
Sbjct: 131 PFPAHCEQTKFGGGWLVIQHRFKGALDFFRNWTEY 165


>AY341168-1|AAR13732.1|  280|Anopheles gambiae fibrinogen protein.
          Length = 280

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 10/35 (28%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
 Frame = -2

Query: 274 PF-SXCSRSDFPYFYLVILNSFSGLISIWQRLTNF 173
           PF + C ++ F   +LVI + F G +  ++  T +
Sbjct: 131 PFPAYCEQTKFGGGWLVIQHRFKGALDFFRNWTEY 165


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 246,564
Number of Sequences: 2352
Number of extensions: 3575
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 55
effective length of database: 434,619
effective search space used: 18688617
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)