Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc28h12
(375 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4 va... 146 2e-35
L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4 prot... 146 3e-35
D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein. 146 3e-35
BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4 pr... 146 3e-35
BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4 pr... 146 3e-35
BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4 pr... 146 3e-35
BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4 pr... 146 3e-35
BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4 pr... 146 3e-35
BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4 pr... 146 3e-35
BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4 pr... 146 3e-35
BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4 pr... 146 3e-35
BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4 pr... 146 3e-35
AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4 va... 146 3e-35
AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4 pr... 146 3e-35
AF013956-1|AAB80718.1| 558|Homo sapiens Polycomb 2 homolog prot... 31 0.92
AL390776-3|CAI12492.1| 250|Homo sapiens prion protein interacti... 31 1.2
>AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4
variant protein.
Length = 441
Score = 146 bits (354), Expect = 2e-35
Identities = 69/94 (73%), Positives = 79/94 (84%)
Frame = +2
Query: 92 SLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEA 271
+++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ A
Sbjct: 14 AMACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELA 72
Query: 272 GHQTSAESWGTGRAVXRIPRVRGGGTHRSGQGAF 373
GHQTSAESWGTGRAV RIPRVRGGGTHRSGQGAF
Sbjct: 73 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAF 106
>L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4
protein.
Length = 426
Score = 146 bits (353), Expect = 3e-35
Identities = 69/93 (74%), Positives = 78/93 (83%)
Frame = +2
Query: 95 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 274
++VARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MAVARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDMVNFVHTNLRKNNRQPYAVSELAG 59
Query: 275 HQTSAESWGTGRAVXRIPRVRGGGTHRSGQGAF 373
HQT AESWGTGRAV RIPRVRGGGTHRSGQGAF
Sbjct: 60 HQTRAESWGTGRAVARIPRVRGGGTHRSGQGAF 92
>D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein.
Length = 427
Score = 146 bits (353), Expect = 3e-35
Identities = 69/93 (74%), Positives = 78/93 (83%)
Frame = +2
Query: 95 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 274
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 275 HQTSAESWGTGRAVXRIPRVRGGGTHRSGQGAF 373
HQTSAESWGTGRAV RIPRVRGGGTHRSGQGAF
Sbjct: 60 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAF 92
>BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 146 bits (353), Expect = 3e-35
Identities = 69/93 (74%), Positives = 78/93 (83%)
Frame = +2
Query: 95 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 274
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 275 HQTSAESWGTGRAVXRIPRVRGGGTHRSGQGAF 373
HQTSAESWGTGRAV RIPRVRGGGTHRSGQGAF
Sbjct: 60 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAF 92
>BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 146 bits (353), Expect = 3e-35
Identities = 69/93 (74%), Positives = 78/93 (83%)
Frame = +2
Query: 95 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 274
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 275 HQTSAESWGTGRAVXRIPRVRGGGTHRSGQGAF 373
HQTSAESWGTGRAV RIPRVRGGGTHRSGQGAF
Sbjct: 60 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAF 92
>BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 146 bits (353), Expect = 3e-35
Identities = 69/93 (74%), Positives = 78/93 (83%)
Frame = +2
Query: 95 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 274
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 275 HQTSAESWGTGRAVXRIPRVRGGGTHRSGQGAF 373
HQTSAESWGTGRAV RIPRVRGGGTHRSGQGAF
Sbjct: 60 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAF 92
>BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 146 bits (353), Expect = 3e-35
Identities = 69/93 (74%), Positives = 78/93 (83%)
Frame = +2
Query: 95 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 274
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 275 HQTSAESWGTGRAVXRIPRVRGGGTHRSGQGAF 373
HQTSAESWGTGRAV RIPRVRGGGTHRSGQGAF
Sbjct: 60 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAF 92
>BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 146 bits (353), Expect = 3e-35
Identities = 69/93 (74%), Positives = 78/93 (83%)
Frame = +2
Query: 95 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 274
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 275 HQTSAESWGTGRAVXRIPRVRGGGTHRSGQGAF 373
HQTSAESWGTGRAV RIPRVRGGGTHRSGQGAF
Sbjct: 60 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAF 92
>BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 146 bits (353), Expect = 3e-35
Identities = 69/93 (74%), Positives = 78/93 (83%)
Frame = +2
Query: 95 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 274
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 275 HQTSAESWGTGRAVXRIPRVRGGGTHRSGQGAF 373
HQTSAESWGTGRAV RIPRVRGGGTHRSGQGAF
Sbjct: 60 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAF 92
>BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 146 bits (353), Expect = 3e-35
Identities = 69/93 (74%), Positives = 78/93 (83%)
Frame = +2
Query: 95 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 274
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 275 HQTSAESWGTGRAVXRIPRVRGGGTHRSGQGAF 373
HQTSAESWGTGRAV RIPRVRGGGTHRSGQGAF
Sbjct: 60 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAF 92
>BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 146 bits (353), Expect = 3e-35
Identities = 69/93 (74%), Positives = 78/93 (83%)
Frame = +2
Query: 95 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 274
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 275 HQTSAESWGTGRAVXRIPRVRGGGTHRSGQGAF 373
HQTSAESWGTGRAV RIPRVRGGGTHRSGQGAF
Sbjct: 60 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAF 92
>BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 146 bits (353), Expect = 3e-35
Identities = 69/93 (74%), Positives = 78/93 (83%)
Frame = +2
Query: 95 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 274
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 275 HQTSAESWGTGRAVXRIPRVRGGGTHRSGQGAF 373
HQTSAESWGTGRAV RIPRVRGGGTHRSGQGAF
Sbjct: 60 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAF 92
>AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4
variant protein.
Length = 427
Score = 146 bits (353), Expect = 3e-35
Identities = 69/93 (74%), Positives = 78/93 (83%)
Frame = +2
Query: 95 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 274
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHANLRKNNRQPYAVSELAG 59
Query: 275 HQTSAESWGTGRAVXRIPRVRGGGTHRSGQGAF 373
HQTSAESWGTGRAV RIPRVRGGGTHRSGQGAF
Sbjct: 60 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAF 92
>AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 146 bits (353), Expect = 3e-35
Identities = 69/93 (74%), Positives = 78/93 (83%)
Frame = +2
Query: 95 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAG 274
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+ AG
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAG 59
Query: 275 HQTSAESWGTGRAVXRIPRVRGGGTHRSGQGAF 373
HQTSAESWGTGRAV RIPRVRGGGTHRSGQGAF
Sbjct: 60 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAF 92
>AF013956-1|AAB80718.1| 558|Homo sapiens Polycomb 2 homolog
protein.
Length = 558
Score = 31.5 bits (68), Expect = 0.92
Identities = 13/38 (34%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Frame = -2
Query: 368 HPDRTYEYHHHGHAEFG--XQHVRYPMIRHWFGDQPPC 261
HP + +HHH H G HVR + G++ PC
Sbjct: 385 HPHHHHHHHHHHHHAVGLNLSHVRKRCLSETHGEREPC 422
>AL390776-3|CAI12492.1| 250|Homo sapiens prion protein interacting
protein protein.
Length = 250
Score = 31.1 bits (67), Expect = 1.2
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +1
Query: 91 ESIGSPTFSVGVFRKERDGAGCSQAPPVRVQGAHTS 198
E SP +G+F RD +GCS P++ A S
Sbjct: 54 EPSASPAAGLGIFEVRRDASGCSMLAPLQTGAARFS 89
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,927,462
Number of Sequences: 237096
Number of extensions: 1293250
Number of successful extensions: 2889
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 2737
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2868
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2479134298
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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