Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc28h12
(375 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X13382-1|CAA31759.1| 407|Drosophila melanogaster protein ( Dros... 144 4e-35
BT025959-1|ABG02203.1| 233|Drosophila melanogaster IP15855p pro... 144 4e-35
AY069485-1|AAL39630.1| 401|Drosophila melanogaster LD21756p pro... 144 4e-35
AE014297-4196|AAG22173.1| 401|Drosophila melanogaster CG5502-PA... 144 4e-35
X06881-1|CAA29998.1| 123|Drosophila melanogaster protein ( Dros... 73 9e-14
BT010233-1|AAQ23551.1| 947|Drosophila melanogaster RE59472p pro... 33 0.12
BT003626-1|AAO39629.1| 947|Drosophila melanogaster GH01416p pro... 33 0.12
AY166752-1|AAN85714.1| 1400|Drosophila melanogaster loechrig iso... 33 0.12
AY070541-1|AAL48012.1| 1400|Drosophila melanogaster LD22662p pro... 33 0.12
AE014297-2948|AAF55864.2| 1400|Drosophila melanogaster CG17299-P... 33 0.12
AE014297-2944|AAF55860.2| 947|Drosophila melanogaster CG17299-P... 33 0.12
AE014297-2943|AAN13851.1| 947|Drosophila melanogaster CG17299-P... 33 0.12
BT021357-1|AAX33505.1| 1953|Drosophila melanogaster LP14866p pro... 31 0.36
AE014298-1786|AAF48179.2| 2528|Drosophila melanogaster CG32654-P... 31 0.36
AY113210-1|AAM29215.1| 872|Drosophila melanogaster AT06220p pro... 31 0.64
AE014296-2188|AAF49882.2| 271|Drosophila melanogaster CG17666-P... 31 0.64
AE014296-2187|AAN11857.1| 872|Drosophila melanogaster CG17666-P... 31 0.64
AE013599-3769|AAX52680.1| 4129|Drosophila melanogaster CG33519-P... 28 3.4
AY118719-1|AAM50579.1| 512|Drosophila melanogaster AT29177p pro... 27 5.9
AF050630-1|AAD09205.1| 884|Drosophila melanogaster Ahr homolog ... 27 5.9
AE014297-2199|AAF55308.1| 884|Drosophila melanogaster CG6993-PA... 27 5.9
D21203-1|BAA04745.2| 1408|Drosophila melanogaster large Forked p... 27 7.9
D17528-1|BAA04479.1| 604|Drosophila melanogaster small forked p... 27 7.9
>X13382-1|CAA31759.1| 407|Drosophila melanogaster protein (
Drosophila melanogastermRNA for put. ribosomal protein
L1. ).
Length = 407
Score = 144 bits (348), Expect = 4e-35
Identities = 69/95 (72%), Positives = 78/95 (82%)
Frame = +2
Query: 89 MSLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKE 268
MSL ARPLVSVY+EK+E + LP VFKAPIRPD+VN+VH + +N+RQ Y VS+
Sbjct: 1 MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSEL 60
Query: 269 AGHQTSAESWGTGRAVXRIPRVRGGGTHRSGQGAF 373
AGHQTSAESWGTGRAV RIPRVRGGGTHRSGQGAF
Sbjct: 61 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAF 95
>BT025959-1|ABG02203.1| 233|Drosophila melanogaster IP15855p
protein.
Length = 233
Score = 144 bits (348), Expect = 4e-35
Identities = 69/95 (72%), Positives = 78/95 (82%)
Frame = +2
Query: 89 MSLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKE 268
MSL ARPLVSVY+EK+E + LP VFKAPIRPD+VN+VH + +N+RQ Y VS+
Sbjct: 1 MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSEL 60
Query: 269 AGHQTSAESWGTGRAVXRIPRVRGGGTHRSGQGAF 373
AGHQTSAESWGTGRAV RIPRVRGGGTHRSGQGAF
Sbjct: 61 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAF 95
>AY069485-1|AAL39630.1| 401|Drosophila melanogaster LD21756p
protein.
Length = 401
Score = 144 bits (348), Expect = 4e-35
Identities = 69/95 (72%), Positives = 78/95 (82%)
Frame = +2
Query: 89 MSLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKE 268
MSL ARPLVSVY+EK+E + LP VFKAPIRPD+VN+VH + +N+RQ Y VS+
Sbjct: 1 MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSEL 60
Query: 269 AGHQTSAESWGTGRAVXRIPRVRGGGTHRSGQGAF 373
AGHQTSAESWGTGRAV RIPRVRGGGTHRSGQGAF
Sbjct: 61 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAF 95
>AE014297-4196|AAG22173.1| 401|Drosophila melanogaster CG5502-PA
protein.
Length = 401
Score = 144 bits (348), Expect = 4e-35
Identities = 69/95 (72%), Positives = 78/95 (82%)
Frame = +2
Query: 89 MSLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKE 268
MSL ARPLVSVY+EK+E + LP VFKAPIRPD+VN+VH + +N+RQ Y VS+
Sbjct: 1 MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSEL 60
Query: 269 AGHQTSAESWGTGRAVXRIPRVRGGGTHRSGQGAF 373
AGHQTSAESWGTGRAV RIPRVRGGGTHRSGQGAF
Sbjct: 61 AGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAF 95
>X06881-1|CAA29998.1| 123|Drosophila melanogaster protein (
Drosophila gene forribosomal protein L1 fragment. ).
Length = 123
Score = 73.3 bits (172), Expect = 9e-14
Identities = 32/33 (96%), Positives = 32/33 (96%)
Frame = +2
Query: 275 HQTSAESWGTGRAVXRIPRVRGGGTHRSGQGAF 373
HQTSAESWGTGRAV RIPRVRGGGTHRSGQGAF
Sbjct: 1 HQTSAESWGTGRAVARIPRVRGGGTHRSGQGAF 33
>BT010233-1|AAQ23551.1| 947|Drosophila melanogaster RE59472p
protein.
Length = 947
Score = 33.1 bits (72), Expect = 0.12
Identities = 25/78 (32%), Positives = 30/78 (38%), Gaps = 2/78 (2%)
Frame = +2
Query: 143 TVQGAAKP--LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAV 316
TV G A P P +F RP +D K+ P A T + S GTG A
Sbjct: 217 TVHGIASPNRRPTIFDV-FRPRAKSDAKRQKEKHLLDPSSADSSATSSTYSVSGGTGPAT 275
Query: 317 XRIPRVRGGGTHRSGQGA 370
GG +GQGA
Sbjct: 276 SSAAGGAGGAAAAAGQGA 293
>BT003626-1|AAO39629.1| 947|Drosophila melanogaster GH01416p
protein.
Length = 947
Score = 33.1 bits (72), Expect = 0.12
Identities = 25/78 (32%), Positives = 30/78 (38%), Gaps = 2/78 (2%)
Frame = +2
Query: 143 TVQGAAKP--LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAV 316
TV G A P P +F RP +D K+ P A T + S GTG A
Sbjct: 217 TVHGIASPNRRPTIFDV-FRPRAKSDAKRQKEKHLLDPSSADSSATSSTYSVSGGTGPAT 275
Query: 317 XRIPRVRGGGTHRSGQGA 370
GG +GQGA
Sbjct: 276 SSAAGGAGGAAAAAGQGA 293
>AY166752-1|AAN85714.1| 1400|Drosophila melanogaster loechrig
isoform I protein.
Length = 1400
Score = 33.1 bits (72), Expect = 0.12
Identities = 25/78 (32%), Positives = 30/78 (38%), Gaps = 2/78 (2%)
Frame = +2
Query: 143 TVQGAAKP--LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAV 316
TV G A P P +F RP +D K+ P A T + S GTG A
Sbjct: 670 TVHGIASPNRRPTIFDV-FRPRAKSDAKRQKEKHLLDPSSADSSATSSTYSVSGGTGPAT 728
Query: 317 XRIPRVRGGGTHRSGQGA 370
GG +GQGA
Sbjct: 729 SSAAGGAGGAAAAAGQGA 746
>AY070541-1|AAL48012.1| 1400|Drosophila melanogaster LD22662p
protein.
Length = 1400
Score = 33.1 bits (72), Expect = 0.12
Identities = 25/78 (32%), Positives = 30/78 (38%), Gaps = 2/78 (2%)
Frame = +2
Query: 143 TVQGAAKP--LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAV 316
TV G A P P +F RP +D K+ P A T + S GTG A
Sbjct: 670 TVHGIASPNRRPTIFDV-FRPRAKSDAKRQKEKHLLDPSSADSSATSSTYSVSGGTGPAT 728
Query: 317 XRIPRVRGGGTHRSGQGA 370
GG +GQGA
Sbjct: 729 SSAAGGAGGAAAAAGQGA 746
>AE014297-2948|AAF55864.2| 1400|Drosophila melanogaster CG17299-PF,
isoform F protein.
Length = 1400
Score = 33.1 bits (72), Expect = 0.12
Identities = 25/78 (32%), Positives = 30/78 (38%), Gaps = 2/78 (2%)
Frame = +2
Query: 143 TVQGAAKP--LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAV 316
TV G A P P +F RP +D K+ P A T + S GTG A
Sbjct: 670 TVHGIASPNRRPTIFDV-FRPRAKSDAKRQKEKHLLDPSSADSSATSSTYSVSGGTGPAT 728
Query: 317 XRIPRVRGGGTHRSGQGA 370
GG +GQGA
Sbjct: 729 SSAAGGAGGAAAAAGQGA 746
>AE014297-2944|AAF55860.2| 947|Drosophila melanogaster CG17299-PB,
isoform B protein.
Length = 947
Score = 33.1 bits (72), Expect = 0.12
Identities = 25/78 (32%), Positives = 30/78 (38%), Gaps = 2/78 (2%)
Frame = +2
Query: 143 TVQGAAKP--LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAV 316
TV G A P P +F RP +D K+ P A T + S GTG A
Sbjct: 217 TVHGIASPNRRPTIFDV-FRPRAKSDAKRQKEKHLLDPSSADSSATSSTYSVSGGTGPAT 275
Query: 317 XRIPRVRGGGTHRSGQGA 370
GG +GQGA
Sbjct: 276 SSAAGGAGGAAAAAGQGA 293
>AE014297-2943|AAN13851.1| 947|Drosophila melanogaster CG17299-PA,
isoform A protein.
Length = 947
Score = 33.1 bits (72), Expect = 0.12
Identities = 25/78 (32%), Positives = 30/78 (38%), Gaps = 2/78 (2%)
Frame = +2
Query: 143 TVQGAAKP--LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAV 316
TV G A P P +F RP +D K+ P A T + S GTG A
Sbjct: 217 TVHGIASPNRRPTIFDV-FRPRAKSDAKRQKEKHLLDPSSADSSATSSTYSVSGGTGPAT 275
Query: 317 XRIPRVRGGGTHRSGQGA 370
GG +GQGA
Sbjct: 276 SSAAGGAGGAAAAAGQGA 293
>BT021357-1|AAX33505.1| 1953|Drosophila melanogaster LP14866p
protein.
Length = 1953
Score = 31.5 bits (68), Expect = 0.36
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = +1
Query: 94 SIGSPTFSVGVFRKERDGAGCSQAPPVRVQG--AHTSGPG 207
++GSP ++VG G G S APP V AH +G G
Sbjct: 287 AVGSPIYAVGASSAHSAGVGASPAPPTGVVAPPAHLAGIG 326
>AE014298-1786|AAF48179.2| 2528|Drosophila melanogaster CG32654-PC
protein.
Length = 2528
Score = 31.5 bits (68), Expect = 0.36
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = +1
Query: 94 SIGSPTFSVGVFRKERDGAGCSQAPPVRVQG--AHTSGPG 207
++GSP ++VG G G S APP V AH +G G
Sbjct: 287 AVGSPIYAVGASSAHSAGVGASPAPPTGVVAPPAHLAGIG 326
>AY113210-1|AAM29215.1| 872|Drosophila melanogaster AT06220p
protein.
Length = 872
Score = 30.7 bits (66), Expect = 0.64
Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +1
Query: 307 TCCXP-NSACPWWWYS*VRSGC 369
TCC P ++ CPW WY +GC
Sbjct: 718 TCCMPCSNQCPWSWYYNPCTGC 739
>AE014296-2188|AAF49882.2| 271|Drosophila melanogaster CG17666-PB,
isoform B protein.
Length = 271
Score = 30.7 bits (66), Expect = 0.64
Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +1
Query: 307 TCCXP-NSACPWWWYS*VRSGC 369
TCC P ++ CPW WY +GC
Sbjct: 117 TCCMPCSNQCPWSWYYNPCTGC 138
>AE014296-2187|AAN11857.1| 872|Drosophila melanogaster CG17666-PA,
isoform A protein.
Length = 872
Score = 30.7 bits (66), Expect = 0.64
Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +1
Query: 307 TCCXP-NSACPWWWYS*VRSGC 369
TCC P ++ CPW WY +GC
Sbjct: 718 TCCMPCSNQCPWSWYYNPCTGC 739
>AE013599-3769|AAX52680.1| 4129|Drosophila melanogaster CG33519-PB
protein.
Length = 4129
Score = 28.3 bits (60), Expect = 3.4
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = -2
Query: 167 GAWLHPAPSRSFLNTPTLKVGLPIDS 90
G L P+P +F+N+P ++GL ID+
Sbjct: 2266 GMLLRPSPEINFINSPNGQIGLIIDA 2291
>AY118719-1|AAM50579.1| 512|Drosophila melanogaster AT29177p
protein.
Length = 512
Score = 27.5 bits (58), Expect = 5.9
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = -2
Query: 368 HPDRTYEYHHHGHAEFGXQH 309
HP + +HHH H E QH
Sbjct: 444 HPHSHHHHHHHHHHETAHQH 463
>AF050630-1|AAD09205.1| 884|Drosophila melanogaster Ahr homolog
spineless protein.
Length = 884
Score = 27.5 bits (58), Expect = 5.9
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = -2
Query: 368 HPDRTYEYHHHGHAEFGXQH 309
HP + +HHH H E QH
Sbjct: 816 HPHSHHHHHHHHHHETAHQH 835
>AE014297-2199|AAF55308.1| 884|Drosophila melanogaster CG6993-PA
protein.
Length = 884
Score = 27.5 bits (58), Expect = 5.9
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = -2
Query: 368 HPDRTYEYHHHGHAEFGXQH 309
HP + +HHH H E QH
Sbjct: 816 HPHSHHHHHHHHHHETAHQH 835
>D21203-1|BAA04745.2| 1408|Drosophila melanogaster large Forked
protein protein.
Length = 1408
Score = 27.1 bits (57), Expect = 7.9
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -2
Query: 371 RHPDRTYEYHHHGHAEFGXQHVRYPMIRHWFGDQPP 264
RHP +++ HH H H +P H G+QPP
Sbjct: 1023 RHP---HQHQHHPHPH---PHPHHPHQLHGMGEQPP 1052
>D17528-1|BAA04479.1| 604|Drosophila melanogaster small forked
protein protein.
Length = 604
Score = 27.1 bits (57), Expect = 7.9
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -2
Query: 371 RHPDRTYEYHHHGHAEFGXQHVRYPMIRHWFGDQPP 264
RHP +++ HH H H +P H G+QPP
Sbjct: 222 RHP---HQHQHHPHPH---PHPHHPHQLHGMGEQPP 251
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,600,835
Number of Sequences: 53049
Number of extensions: 409255
Number of successful extensions: 2026
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1640
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1932
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 982468965
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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