Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc28g18
         (479 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL589986-1|CAH70024.1| 1943|Homo sapiens trichohyalin protein.         29   8.5  
AB023222-1|BAA76849.1| 1055|Homo sapiens KIAA1005 protein protein.     29   8.5  

>AL589986-1|CAH70024.1| 1943|Homo sapiens trichohyalin protein.
          Length = 1943

 Score = 29.1 bits (62), Expect = 8.5
 Identities = 12/25 (48%), Positives = 18/25 (72%)
 Frame = +2

Query: 230 SKIYSRER*QQNKHVRQNADKKKRR 304
           SK+YSR R Q+ +  RQ  ++K+RR
Sbjct: 717 SKVYSRPRKQEGQRRRQEQEEKRRR 741


>AB023222-1|BAA76849.1| 1055|Homo sapiens KIAA1005 protein protein.
          Length = 1055

 Score = 29.1 bits (62), Expect = 8.5
 Identities = 17/43 (39%), Positives = 27/43 (62%), Gaps = 3/43 (6%)
 Frame = -3

Query: 129  VFDSGQQIVERTIDVCDAR---R*IGQNRVGVVQLVALRLLHR 10
            +F  G+ ++E+ IDV DAR     IG+ RV V  L AL+ +++
Sbjct: 1005 MFQEGRDLIEQNIDVFDARADGEGIGKLRVTVEALHALQSVYK 1047


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,979,706
Number of Sequences: 237096
Number of extensions: 1025920
Number of successful extensions: 2630
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2566
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2630
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4270724850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)