Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc28g16
         (695 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ970245-1|CAI96717.1|  134|Anopheles gambiae putative reverse t...    26   0.99 
AJ276487-1|CAB90819.1|  375|Anopheles gambiae serine protease pr...    24   4.0  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    24   5.3  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    23   7.0  
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          23   9.2  

>AJ970245-1|CAI96717.1|  134|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 134

 Score = 26.2 bits (55), Expect = 0.99
 Identities = 12/57 (21%), Positives = 28/57 (49%)
 Frame = -1

Query: 410 RTATRCFNWNLVLR*ARASNQVLAAVTRINQIIAVLISNECTLQNNQIGIAETIKAF 240
           R A   FN N++ +        L+   +++++   ++ N C  ++  + + +T KAF
Sbjct: 22  RMALHTFNNNIIPKSQFGFRPSLSTTHQLHRVTNNIVHNRCNRKSTGLALLDTEKAF 78


>AJ276487-1|CAB90819.1|  375|Anopheles gambiae serine protease
           protein.
          Length = 375

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -2

Query: 433 HGQQHPPCAQQHGAS 389
           HGQ+H PC   +G +
Sbjct: 23  HGQEHKPCTTPNGTA 37


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
          Length = 2051

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 10/41 (24%), Positives = 16/41 (39%)
 Frame = -2

Query: 529  LHNLPPHSFSTRXXXXXXXXXXFYHQQVSWTFHGQQHPPCA 407
            + N P  S   R          +Y +  ++ + G  HP CA
Sbjct: 1621 IQNYPIESEYARYFFSVHPDFDYYERMFNYAYRGNYHPSCA 1661


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -2

Query: 454 QQVSWTFHGQQHPPCAQQH 398
           QQ   ++H QQHP  +Q H
Sbjct: 166 QQQPSSYHQQQHPGHSQHH 184


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 13/71 (18%), Positives = 27/71 (38%)
 Frame = +1

Query: 268 IWLFWRVHSLEISTAIIWFILVTAASTWLLALAYRNTKFQLKHXXXXXXXXXXXXXMSRK 447
           I+L  R H++ +     WF++   +   +L + YR      +              + +K
Sbjct: 245 IYLTARKHNIPLPNNPPWFVIFRVSEDDMLDVCYRIMALYKRGKPNAELLEEAVEALKKK 304

Query: 448 LADDKKMSRKE 480
             + +K  R E
Sbjct: 305 YQEQRKKDRPE 315


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 708,890
Number of Sequences: 2352
Number of extensions: 14861
Number of successful extensions: 30
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70668195
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)