Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc28g05
(196 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
S78458-1|AAB34402.1| 46|Apis mellifera apamin protein. 22 0.76
U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive o... 19 4.1
AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin ... 19 4.1
Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1 p... 19 5.4
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 19 5.4
DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein. 18 9.4
AY898652-1|AAX83121.1| 349|Apis mellifera AKH receptor protein. 18 9.4
AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein ... 18 9.4
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 18 9.4
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 18 9.4
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 18 9.4
AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein ... 18 9.4
>S78458-1|AAB34402.1| 46|Apis mellifera apamin protein.
Length = 46
Score = 21.8 bits (44), Expect = 0.76
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = +1
Query: 91 IIIYFLFVLNVTPSNCCIRLVCLCIR 168
I+I FV V P NC LC R
Sbjct: 15 ILITSYFVTPVMPCNCKAPETALCAR 40
>U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive
opsin protein.
Length = 377
Score = 19.4 bits (38), Expect = 4.1
Identities = 6/17 (35%), Positives = 10/17 (58%)
Frame = +1
Query: 94 IIYFLFVLNVTPSNCCI 144
IIY + ++ NCC+
Sbjct: 62 IIYSMLLIMSLVGNCCV 78
>AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin
protein.
Length = 377
Score = 19.4 bits (38), Expect = 4.1
Identities = 6/17 (35%), Positives = 10/17 (58%)
Frame = +1
Query: 94 IIYFLFVLNVTPSNCCI 144
IIY + ++ NCC+
Sbjct: 62 IIYSMLLIMSLVGNCCV 78
>Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1
protein.
Length = 402
Score = 19.0 bits (37), Expect = 5.4
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +1
Query: 70 TTSECCFIIIYFLFVLNVTPSNCCIRLVCLCIRTIKKL 183
T S +++ FLF++ + S LVC+ I T + L
Sbjct: 19 TFSLLSVLLVGFLFLILIFLSVAGNILVCVAIYTDRGL 56
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 19.0 bits (37), Expect = 5.4
Identities = 5/8 (62%), Positives = 8/8 (100%)
Frame = -2
Query: 147 PNTAIRRC 124
PN+A+R+C
Sbjct: 584 PNSAVRKC 591
>DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein.
Length = 552
Score = 18.2 bits (35), Expect = 9.4
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = +3
Query: 72 DLRVLFYYNLFSFR 113
D R LF++ + SFR
Sbjct: 387 DDRTLFFHPMSSFR 400
>AY898652-1|AAX83121.1| 349|Apis mellifera AKH receptor protein.
Length = 349
Score = 18.2 bits (35), Expect = 9.4
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = -1
Query: 70 SVFLLNCTSLINYY 29
S F+L C S+ YY
Sbjct: 125 SSFVLVCISMDRYY 138
>AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein 1
protein.
Length = 500
Score = 18.2 bits (35), Expect = 9.4
Identities = 6/15 (40%), Positives = 13/15 (86%)
Frame = -1
Query: 79 LRSSVFLLNCTSLIN 35
++S+ F+ +C+SL+N
Sbjct: 386 IQSTDFVGDCSSLLN 400
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 18.2 bits (35), Expect = 9.4
Identities = 8/28 (28%), Positives = 10/28 (35%)
Frame = -2
Query: 171 CSYAQAYEPNTAIRRCNIQNEKKINYNK 88
C Y Y RC N +I + K
Sbjct: 228 CDYPDIYSGYEGALRCLAHNGGEIAWTK 255
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 18.2 bits (35), Expect = 9.4
Identities = 8/28 (28%), Positives = 10/28 (35%)
Frame = -2
Query: 171 CSYAQAYEPNTAIRRCNIQNEKKINYNK 88
C Y Y RC N +I + K
Sbjct: 228 CDYPDIYSGYEGALRCLAHNGGEIAWTK 255
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 18.2 bits (35), Expect = 9.4
Identities = 8/28 (28%), Positives = 10/28 (35%)
Frame = -2
Query: 171 CSYAQAYEPNTAIRRCNIQNEKKINYNK 88
C Y Y RC N +I + K
Sbjct: 228 CDYPDIYSGYEGALRCLAHNGGEIAWTK 255
>AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein
protein.
Length = 130
Score = 18.2 bits (35), Expect = 9.4
Identities = 9/29 (31%), Positives = 14/29 (48%)
Frame = -2
Query: 177 LYCSYAQAYEPNTAIRRCNIQNEKKINYN 91
L+ S A Y+P+ R + KK+ N
Sbjct: 101 LWDSLANKYDPDKKFRVKFEEEAKKLGIN 129
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 51,355
Number of Sequences: 438
Number of extensions: 723
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 44
effective length of database: 127,071
effective search space used: 2541420
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)
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