Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc28g04
         (610 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    29   0.16 
CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.          27   0.47 
M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.              24   3.3  
DQ518577-1|ABF66619.1|  318|Anopheles gambiae putative secreted ...    24   3.3  
DQ137802-1|AAZ78363.1|  265|Anopheles gambiae female-specific do...    24   3.3  
DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific doub...    24   3.3  
AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    24   4.4  

>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
           channel alpha subunitprotein.
          Length = 2139

 Score = 28.7 bits (61), Expect = 0.16
 Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
 Frame = +1

Query: 109 VGLSADELRRRREEEGVQLRKQKRE-QQLFKRRNVNLPGTN-AAGAASQEDINISPSD 276
           V +S DEL+++ EEE     +  RE ++    +   L     AA AA+  +I  SPSD
Sbjct: 426 VAMSYDELQKKAEEEEAAEEEALREAEEAAAAKAAKLEAQQAAAAAAANPEIAKSPSD 483


>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
          Length = 1494

 Score = 27.1 bits (57), Expect = 0.47
 Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
 Frame = +1

Query: 67   SNTMSGGHKHRYKNVGLSADE-LRRRREEEGVQLRKQKREQQLFKRRNVNLPGTNAAG 237
            SNTM G    ++ N G+S    L+ ++++   +  +Q+RE       N   P    AG
Sbjct: 974  SNTMDGSFGRQFSNEGISGQSWLQLQQQKLRARREQQRREHSNSFSYNYGSPAFPTAG 1031


>M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.
          Length = 613

 Score = 24.2 bits (50), Expect = 3.3
 Identities = 10/39 (25%), Positives = 21/39 (53%)
 Frame = +1

Query: 73  TMSGGHKHRYKNVGLSADELRRRREEEGVQLRKQKREQQ 189
           T  G H  R +       +  +R++++  Q R+Q+++QQ
Sbjct: 201 TAQGAHSSRNRRGRQGPQQQEQRQQQQQHQQREQQQQQQ 239


>DQ518577-1|ABF66619.1|  318|Anopheles gambiae putative secreted
           carbonic anhydrase protein.
          Length = 318

 Score = 24.2 bits (50), Expect = 3.3
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +3

Query: 477 GADKHRLGFVRTNSYRSGLWRSKCAG 554
           GAD HR G+ + +  R       CAG
Sbjct: 29  GADGHRFGYSKPDQRRWSKAHQSCAG 54


>DQ137802-1|AAZ78363.1|  265|Anopheles gambiae female-specific
           doublesex protein protein.
          Length = 265

 Score = 24.2 bits (50), Expect = 3.3
 Identities = 17/57 (29%), Positives = 23/57 (40%)
 Frame = -3

Query: 497 EAMFVSAHAASNCKVGFLWFVRNSINFGTIPDCITASIGGLGSLLRSFLNFCVAMTC 327
           EAM  S + +     G      NS+N  T P+C      GL   L+    +C   TC
Sbjct: 9   EAMSDSGYDSRTDGNGASSSCNNSLNPRTPPNCARCRNHGLKIGLKGHKRYCKYRTC 65


>DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 622

 Score = 24.2 bits (50), Expect = 3.3
 Identities = 17/57 (29%), Positives = 23/57 (40%)
 Frame = -3

Query: 497 EAMFVSAHAASNCKVGFLWFVRNSINFGTIPDCITASIGGLGSLLRSFLNFCVAMTC 327
           EAM  S + +     G      NS+N  T P+C      GL   L+    +C   TC
Sbjct: 9   EAMSDSGYDSRTDGNGASSSCNNSLNPRTPPNCARCRNHGLKIGLKGHKRYCKYRTC 65


>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 23.8 bits (49), Expect = 4.4
 Identities = 15/57 (26%), Positives = 24/57 (42%)
 Frame = +1

Query: 19  LTKTLNIFSLVYVVLFSNTMSGGHKHRYKNVGLSADELRRRREEEGVQLRKQKREQQ 189
           LT T ++  L      +   S G     +        LRRR  E   Q ++Q+++QQ
Sbjct: 142 LTGTRSVLELQTAANATLQQSSGQGGNRETARKRQQRLRRRERERQQQQQQQQQQQQ 198



 Score = 23.4 bits (48), Expect = 5.8
 Identities = 13/51 (25%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
 Frame = +1

Query: 127 ELRRRREEEGVQLRKQKR-EQQLFKRRNVNLPGTNAAGAASQEDINISPSD 276
           +LR++R+++  Q ++Q+R +QQ  +++      +     A  E I +SP++
Sbjct: 455 QLRQQRQQQQPQQQQQQRPQQQRPQQQRPQQQRSQQRKPAKPELIEVSPNE 505


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 569,684
Number of Sequences: 2352
Number of extensions: 10577
Number of successful extensions: 31
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 59291487
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)