Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc28f15
(684 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q82484 Cluster: Very late expression factor 1; n=31; Nu... 289 4e-77
UniRef50_Q6QXL7 Cluster: ORF97; n=10; Granulovirus|Rep: ORF97 - ... 117 3e-25
UniRef50_Q6JPC6 Cluster: Very late factor-1; n=3; Nucleopolyhedr... 85 2e-15
UniRef50_Q06693 Cluster: Uncharacterized 12.5 kDa protein in VLF... 49 1e-04
UniRef50_Q5HMX5 Cluster: Putative uncharacterized protein; n=1; ... 38 0.30
UniRef50_UPI00006CCB7D Cluster: Protein kinase domain containing... 36 0.92
UniRef50_Q54YZ1 Cluster: Putative uncharacterized protein; n=1; ... 36 0.92
UniRef50_Q919Q1 Cluster: CUN018 putative vlf-1 very late express... 36 1.2
UniRef50_Q22LY1 Cluster: Putative uncharacterized protein; n=1; ... 36 1.2
UniRef50_Q6BK19 Cluster: Similar to CA1908|CaAPL3 Candida albica... 36 1.2
UniRef50_Q8I525 Cluster: Putative uncharacterized protein; n=1; ... 35 1.6
UniRef50_Q6LFN2 Cluster: Putative uncharacterized protein; n=2; ... 35 1.6
UniRef50_Q7RL15 Cluster: Kinesin motor domain, putative; n=2; Pl... 35 2.1
UniRef50_O24617 Cluster: DNA mismatch repair protein MSH2; n=8; ... 35 2.1
UniRef50_Q5DY15 Cluster: Lateral flagellar hook protein; n=17; G... 34 3.7
UniRef50_A5TUQ8 Cluster: Putative uncharacterized protein; n=1; ... 34 3.7
UniRef50_Q8I5C8 Cluster: Putative uncharacterized protein; n=3; ... 34 3.7
UniRef50_P17965 Cluster: RNA replication protein (147 kDa protei... 34 3.7
UniRef50_Q4FMH9 Cluster: Putative uncharacterized protein; n=1; ... 33 4.9
UniRef50_A2FKT9 Cluster: Viral A-type inclusion protein, putativ... 33 4.9
UniRef50_A0DCS4 Cluster: Chromosome undetermined scaffold_46, wh... 33 4.9
UniRef50_A0BJS8 Cluster: Chromosome undetermined scaffold_110, w... 33 4.9
UniRef50_UPI00015282EF Cluster: UPI00015282EF related cluster; n... 33 6.5
UniRef50_UPI00006CE5B4 Cluster: hypothetical protein TTHERM_0014... 33 6.5
UniRef50_Q5CSZ7 Cluster: Putative uncharacterized protein; n=2; ... 33 6.5
UniRef50_UPI00006CBFF5 Cluster: hypothetical protein TTHERM_0041... 33 8.6
UniRef50_A2BV45 Cluster: Putative uncharacterized protein; n=4; ... 33 8.6
UniRef50_Q8IM29 Cluster: Putative uncharacterized protein; n=1; ... 33 8.6
UniRef50_A1Z6X9 Cluster: CG11112-PB, isoform B; n=2; Drosophila ... 33 8.6
UniRef50_A7TI79 Cluster: Putative uncharacterized protein; n=1; ... 33 8.6
UniRef50_P62422 Cluster: Phosphoglycerate kinase; n=5; Wolbachia... 33 8.6
>UniRef50_Q82484 Cluster: Very late expression factor 1; n=31;
Nucleopolyhedrovirus|Rep: Very late expression factor 1
- Heliothis zea nuclear polyhedrosis virus (HzSNPV)
(Helicoverpa zeasingle nucleocapsid nuclear polyhedrosis
virus)
Length = 415
Score = 289 bits (709), Expect = 4e-77
Identities = 132/190 (69%), Positives = 162/190 (85%), Gaps = 2/190 (1%)
Frame = +2
Query: 119 WKIKIQSTPRFESVFDLATDRQRCTPDEVKNNSLWSKYMFPKPFAPTTLKSYKSRFIKIV 298
WK +IQ+ +F+ +F+L TDRQRCTPDEVKNNSLWS+YMF KPFAPTTLKSYKSRFIK++
Sbjct: 17 WKSRIQNHDKFDEIFELTTDRQRCTPDEVKNNSLWSQYMFCKPFAPTTLKSYKSRFIKLI 76
Query: 299 YCSVDDVHLEDM--SYSLDMEFDSIENQTLLIDPQELCRRMLELRSVTKETLQLTINFYT 472
YC +DD +L + +++L+ EF+SI Q LI P+ELCRRMLELRSVTKETLQLTINFYT
Sbjct: 77 YCLIDDEYLNNYYDTHTLNKEFNSIVQQQPLIKPEELCRRMLELRSVTKETLQLTINFYT 136
Query: 473 NMMNLPEYKIPRMVMLPRDKELKNIRKKEKNLMLKNVIDTILNFINDKIKMLNGDYVHDR 652
N MNLPEYKIP+ VMLPRDKE+KNI+ EKN++L+ +I+TIL+ I KIK L+ ++VHDR
Sbjct: 137 NTMNLPEYKIPKQVMLPRDKEIKNIKNNEKNIVLREIINTILDCIEKKIKHLSSEFVHDR 196
Query: 653 GLIRGAIVFC 682
GLIRGAIVFC
Sbjct: 197 GLIRGAIVFC 206
>UniRef50_Q6QXL7 Cluster: ORF97; n=10; Granulovirus|Rep: ORF97 -
Agrotis segetum granulosis virus (AsGV) (Agrotis
segetumgranulovirus)
Length = 382
Score = 117 bits (281), Expect = 3e-25
Identities = 66/194 (34%), Positives = 112/194 (57%), Gaps = 7/194 (3%)
Frame = +2
Query: 119 WKIKIQSTPRFESVFDLATDRQRCTPDEV-----KNNSLWSKYMFPKPFAPTTLKSYKSR 283
W+I I+ P F V + +RQ+ D V K+ +LW + + + TT ++S
Sbjct: 22 WRIVIKQDPIFPRVLEETIERQKRGDDVVPRGEGKHKNLWQPHKKSQEYKQTTKDEFQSL 81
Query: 284 FIKIVYCSVDDVHLEDMS-YSLDMEFDSIENQTLLIDPQELCRRMLELRSVTKETLQLTI 460
+KI+YC +++ LE+ Y+++ E S+ L+D ++ R+L + +V+K+ LQ TI
Sbjct: 82 LLKIIYCLIEEEDLENYGWYTVERELGSLLKAEPLMDVEDFIERLLIMGNVSKKRLQATI 141
Query: 461 NFYTNMMNLPEYKIPRMVMLPRDKELKNIRKKEKNLMLK-NVIDTILNFINDKIKMLNGD 637
NFYT M +P+Y IP V LP+D+E K+ K ++LK + ID I +FI+ +I+ N
Sbjct: 142 NFYTRSMKIPDYYIPSNVELPKDREKKDRLAINKTIVLKDDFIDPISDFIDKEIQYKN-- 199
Query: 638 YVHDRGLIRGAIVF 679
Y +++ L+R AI F
Sbjct: 200 YYNNQSLLRAAIAF 213
>UniRef50_Q6JPC6 Cluster: Very late factor-1; n=3;
Nucleopolyhedrovirus|Rep: Very late factor-1 -
Neodiprion lecontii NPV
Length = 354
Score = 84.6 bits (200), Expect = 2e-15
Identities = 45/192 (23%), Positives = 104/192 (54%), Gaps = 5/192 (2%)
Frame = +2
Query: 119 WKIKIQSTPRFESVFDLATDRQRCTPDEVKNNSLWSKYMFPKPFAPTTLKSYKSRFIKIV 298
W ++I+ +F ++ + DRQ+ D + KY+F KP + +T+ SYKS+ KI+
Sbjct: 12 WGVRIRRHTQFHNISQIMIDRQKTVHDT--GIGILKKYLFTKPMSTSTINSYKSKVAKII 69
Query: 299 YCSV-DDVHLEDMSYSLDMEFDSIENQTLLIDPQELCRRMLELRSVTKETLQLTINFYTN 475
Y + D+V +E +LDM +++++ ++ ++ + +++L T++FY N
Sbjct: 70 YSLIXDNVLMEKNFVALDMVVRNLQHKIHAMENDIFIDNLIRSSDICRKSLICTVDFYCN 129
Query: 476 MMNLP--EYKIPRMVMLPRDKELKNIRKKEKNLMLKNVIDTILNFI--NDKIKMLNGDYV 643
M+L E+ IP+ + P+D + KN ++ ++++ + ++I N + + +
Sbjct: 130 AMDLSRNEFVIPKCLKTPKDLLNNREHRNRKNTVVDDIVNKLYDYIVCNVVPNIRSNTNL 189
Query: 644 HDRGLIRGAIVF 679
++ ++RG+++F
Sbjct: 190 INKSVVRGSVLF 201
>UniRef50_Q06693 Cluster: Uncharacterized 12.5 kDa protein in
VLF1-GP41 intergenic region; n=12;
Nucleopolyhedrovirus|Rep: Uncharacterized 12.5 kDa
protein in VLF1-GP41 intergenic region - Autographa
californica nuclear polyhedrosis virus (AcMNPV)
Length = 109
Score = 48.8 bits (111), Expect = 1e-04
Identities = 21/22 (95%), Positives = 21/22 (95%)
Frame = +3
Query: 3 REQQQYSDSIDTDSPFVFNKLD 68
REQQQYSDSIDTDSPFVFNK D
Sbjct: 88 REQQQYSDSIDTDSPFVFNKFD 109
>UniRef50_Q5HMX5 Cluster: Putative uncharacterized protein; n=1;
Staphylococcus epidermidis RP62A|Rep: Putative
uncharacterized protein - Staphylococcus epidermidis
(strain ATCC 35984 / RP62A)
Length = 512
Score = 37.5 bits (83), Expect = 0.30
Identities = 38/133 (28%), Positives = 62/133 (46%), Gaps = 2/133 (1%)
Frame = +2
Query: 230 YMFPKPFAPTTLKSYKSRFIKIVYCSVDDVHLEDMSYSLDMEFDSIENQTLLID-PQELC 406
Y+FPK YK +VY ++ +V L+ Y LD D EN+ L+ + +EL
Sbjct: 340 YLFPKKNKHGDSSIYKGISYNVVYETLKEVILQVKDY-LDSVLDQNENKDLVEELKEELM 398
Query: 407 RRMLELRSVTKETLQLTINFYTNMMNLPEYKIPRMVMLPRDKELKNIRKKEKNL-MLKNV 583
++ EL ++ K ++ F + Y + L +KE K I +KEK + +K
Sbjct: 399 KKEDELETIQKAKNRIVQGFLIGL-----YDEQDSIELKVEKE-KEIDEKEKEIEAIKMK 452
Query: 584 IDTILNFINDKIK 622
ID +N+ IK
Sbjct: 453 IDN-AKTVNNSIK 464
>UniRef50_UPI00006CCB7D Cluster: Protein kinase domain containing
protein; n=1; Tetrahymena thermophila SB210|Rep: Protein
kinase domain containing protein - Tetrahymena
thermophila SB210
Length = 676
Score = 35.9 bits (79), Expect = 0.92
Identities = 20/72 (27%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Frame = +2
Query: 398 ELCRRMLELRSVTKETLQLTINFYTNMMNLPEYKIPRMVMLP-RDKELKNIRKKEKNLML 574
+LC+++L ++ + +TIN M + + I +++ LP +DKE + IRK +
Sbjct: 562 KLCQQLLSVKDNAFSKIVITIN--DPSMEITKQDIQKIIQLPFKDKEEQPIRKNSNSKNE 619
Query: 575 KNVIDTILNFIN 610
+ +I + N IN
Sbjct: 620 RKIISIVKNLIN 631
>UniRef50_Q54YZ1 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 3282
Score = 35.9 bits (79), Expect = 0.92
Identities = 24/116 (20%), Positives = 50/116 (43%)
Frame = +2
Query: 137 STPRFESVFDLATDRQRCTPDEVKNNSLWSKYMFPKPFAPTTLKSYKSRFIKIVYCSVDD 316
STP ++ +FD+ +++ NS+++ + K Y++ I + + +D
Sbjct: 3168 STPLYKPLFDMLLQFNLLNRNKIDPNSIYTSLQYSAAMLTIDKKFYQASLISLFWWRIDY 3227
Query: 317 VHLEDMSYSLDMEFDSIENQTLLIDPQELCRRMLELRSVTKETLQLTINFYTNMMN 484
++ + SL + LID Q+L + + K+ LQ +N N +N
Sbjct: 3228 QPIQTLDNSLIFLEKFLVQSISLIDQQKLTINSNDW-LICKDKLQSALNILLNNIN 3282
>UniRef50_Q919Q1 Cluster: CUN018 putative vlf-1 very late expression
factor 1, similar to AcMNPV ORF77; n=1; Culex
nigripalpus NPV|Rep: CUN018 putative vlf-1 very late
expression factor 1, similar to AcMNPV ORF77 - Culex
nigripalpus NPV
Length = 358
Score = 35.5 bits (78), Expect = 1.2
Identities = 44/188 (23%), Positives = 77/188 (40%), Gaps = 11/188 (5%)
Frame = +2
Query: 146 RFESVFDLATDRQRCTPDEVKNNSLWSKYMFPKPFAPTTLKSYKSRFIKIVYC--SVDDV 319
R+E +A +R V+ + + ++ + + T + Y++RF K+VY S +
Sbjct: 23 RYEEACRIAIERHLDPRLSVELDDVMRRHATVRSISDQTRRQYRTRFNKLVYIHLSGNGT 82
Query: 320 HLEDMSYSLDMEFDSIENQTLLIDPQ-----ELCRRMLELRSVTKETLQLTINFYTNMMN 484
LE + + N L D E C + E +Q+ FY +
Sbjct: 83 LLEQVDEVCQAFIERKPNYRLCSDALRNRLVEACEQGGGGCDNKAELIQIW-RFYCKIWG 141
Query: 485 LP--EYK--IPRMVMLPRDKELKNIRKKEKNLMLKNVIDTILNFINDKIKMLNGDYVHDR 652
L E++ +PR+V LP D K R K + LK VI +LN + + +R
Sbjct: 142 LDCGEHRLTVPRVVTLPGDARRKFRRADRKQIELKAVILDLLNRSRPFVAEADPKIPQNR 201
Query: 653 GLIRGAIV 676
+ RG ++
Sbjct: 202 QIARGLLI 209
>UniRef50_Q22LY1 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 1151
Score = 35.5 bits (78), Expect = 1.2
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Frame = +2
Query: 425 RSVTKETLQLTINFYTNMMNLPEYKIPRMVMLPRDKEL--KNIRKKEKNLMLKNVIDTIL 598
+ +T+E +Q INF + P YK + +K L K +K +NL+L V I
Sbjct: 899 KDMTQENIQSIINFLLRPYSYPYYKYLQFPYNKSNKSLTNKKYKKTVQNLILSRVFPHIA 958
Query: 599 NFIND 613
NFI +
Sbjct: 959 NFIQE 963
>UniRef50_Q6BK19 Cluster: Similar to CA1908|CaAPL3 Candida albicans
CaAPL3 AP-2 complex subunit; n=1; Debaryomyces
hansenii|Rep: Similar to CA1908|CaAPL3 Candida albicans
CaAPL3 AP-2 complex subunit - Debaryomyces hansenii
(Yeast) (Torulaspora hansenii)
Length = 1048
Score = 35.5 bits (78), Expect = 1.2
Identities = 29/103 (28%), Positives = 52/103 (50%), Gaps = 2/103 (1%)
Frame = +2
Query: 272 YKSRFIKIVYCSVDDVHLEDMSYSLDMEFDSIEN--QTLLIDPQELCRRMLELRSVTKET 445
Y+S+FIKI+Y V D H L ++F I N +T +D L R+L + S+TK
Sbjct: 807 YESQFIKIIYRIVKDGH------QLRLQFTIINNCAKTTGVDITNL--RVLNIESLTKPE 858
Query: 446 LQLTINFYTNMMNLPEYKIPRMVMLPRDKELKNIRKKEKNLML 574
N+ N+ LP+ + + D +++N+ + ++ +L
Sbjct: 859 ---DPNYILNLKQLPKLTVSDKTTMEIDIKIRNVVENNESPIL 898
>UniRef50_Q8I525 Cluster: Putative uncharacterized protein; n=1;
Plasmodium falciparum 3D7|Rep: Putative uncharacterized
protein - Plasmodium falciparum (isolate 3D7)
Length = 5767
Score = 35.1 bits (77), Expect = 1.6
Identities = 39/156 (25%), Positives = 70/156 (44%), Gaps = 1/156 (0%)
Frame = +2
Query: 176 DRQRCTPDEVKNNSLWSKYMFPKPFAPTTLKSYKSRFIKIVYCSVDDVHLEDMSYSLDME 355
DR+R +KNNSL ++ K +YK +K + D+ L+ L+
Sbjct: 73 DRKRLDLLSLKNNSLLNEICEEKEMLKIEYNNYKMESVKDIKRLQDE--LDKNVIMLNCL 130
Query: 356 FDSIENQTLLIDPQELCRRMLELRSVTKETLQLTINFYTNMMNLPEYKIPRMVMLPRDKE 535
D I + + E+ R+ + S E + I N++N + + L DKE
Sbjct: 131 KDEILFKEEELRKAEIIERLYKQESELNEEKDMKIKKLENLLN-------QEIYLKNDKE 183
Query: 536 LKN-IRKKEKNLMLKNVIDTILNFINDKIKMLNGDY 640
K+ I K+E N L+ +++ L+ N+++ +LN Y
Sbjct: 184 EKDKINKEEINEKLQ-LLNNDLDKKNEELNILNKKY 218
>UniRef50_Q6LFN2 Cluster: Putative uncharacterized protein; n=2;
Plasmodium|Rep: Putative uncharacterized protein -
Plasmodium falciparum (isolate 3D7)
Length = 1103
Score = 35.1 bits (77), Expect = 1.6
Identities = 30/118 (25%), Positives = 61/118 (51%), Gaps = 12/118 (10%)
Frame = +2
Query: 332 MSYSLDMEFDSIENQTLLIDPQELCRRMLELRSVTKETLQLTINFYTNMMNLPEYKIPRM 511
M D E++ + N T+ D +EL R + EL + T + + +N +N EY+I +
Sbjct: 681 MENKKDEEYEHLLNNTIE-DKKELTRSIKELE-INMMTCNMEKDKISNKVNTLEYEINVL 738
Query: 512 VMLPRDKELKNIRKKEKNLML------------KNVIDTILNFINDKIKMLNGDYVHD 649
+ +++ ++ +++KE +++ KN+ D I+ N+K KML+G ++ D
Sbjct: 739 KNIDKNQTMQ-LQQKENDILKMKLYIEKLKLSEKNLKDKIILLENEKDKMLSGIHIKD 795
>UniRef50_Q7RL15 Cluster: Kinesin motor domain, putative; n=2;
Plasmodium (Vinckeia)|Rep: Kinesin motor domain, putative
- Plasmodium yoelii yoelii
Length = 1196
Score = 34.7 bits (76), Expect = 2.1
Identities = 21/53 (39%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +2
Query: 461 NFYTNMMNLPEYKIPRMVMLPR-DKELKNIRKKEKNLMLKNVIDTILNFINDK 616
N + N+ NLP+ I + + D+ +KNIR K KN ID I N IN K
Sbjct: 919 NHFQNLTNLPDSIIENKLEIQNLDENIKNIRNKIKNNQTITTIDDI-NMINTK 970
>UniRef50_O24617 Cluster: DNA mismatch repair protein MSH2; n=8;
Embryophyta|Rep: DNA mismatch repair protein MSH2 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 937
Score = 34.7 bits (76), Expect = 2.1
Identities = 35/128 (27%), Positives = 57/128 (44%), Gaps = 3/128 (2%)
Frame = +2
Query: 266 KSYKSRFIKIVYCSVDDVHLEDMSYSLDMEFDSIENQTLLIDPQELCRRML-ELRSVTKE 442
+ + +FI +V CSVD LE+ Y + +D+ L D +EL + + EL T
Sbjct: 439 QDHLGKFIDLVECSVDLDQLENGEYMISSSYDT--KLASLKDQKELLEQQIHELHKKTAI 496
Query: 443 TLQLTINFYTNMMNLPEYKIPRMVMLPRDKELKNIRKK--EKNLMLKNVIDTILNFINDK 616
L L ++ + ++ V KE IRKK + ++L+ D + F N K
Sbjct: 497 ELDLQVDKALKLDKAAQF---GHVFRITKKEEPKIRKKLTTQFIVLETRKDGV-KFTNTK 552
Query: 617 IKMLNGDY 640
+K L Y
Sbjct: 553 LKKLGDQY 560
>UniRef50_Q5DY15 Cluster: Lateral flagellar hook protein; n=17;
Gammaproteobacteria|Rep: Lateral flagellar hook protein
- Escherichia coli
Length = 400
Score = 33.9 bits (74), Expect = 3.7
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +1
Query: 379 TSHRSPRTVQAHARTSIGHQRNATVDYKLLHQH-DEFARIQNSPHGYAAARQGAQKYQEK 555
TS +P+T++ +T + TVDY Q+ EF+ N+ +GYA+A Q + +
Sbjct: 237 TSPTTPQTIEF--QTDAAAPIDLTVDYSTCTQYGSEFSVTTNAANGYASATQNGVQVDDD 294
Query: 556 GKKF 567
GK +
Sbjct: 295 GKVY 298
>UniRef50_A5TUQ8 Cluster: Putative uncharacterized protein; n=1;
Fusobacterium nucleatum subsp. polymorphum ATCC
10953|Rep: Putative uncharacterized protein -
Fusobacterium nucleatum subsp. polymorphum ATCC 10953
Length = 687
Score = 33.9 bits (74), Expect = 3.7
Identities = 35/118 (29%), Positives = 54/118 (45%), Gaps = 11/118 (9%)
Frame = +2
Query: 311 DDVHLEDMSYSLDMEFDSIENQTLLIDPQELCRRMLELRSVT---KETLQLTINFYTNMM 481
+D+++ M + E IEN+ + I C LE+R+ T ETL + N +
Sbjct: 282 EDLYINSMINIKEGEIYVIENKNIHISSMINCSGTLEIRNCTLYYNETLNNEVKKIFNKI 341
Query: 482 NLPE---YKIPRMVMLPR--DKE--LKNIRKKEKNLMLKNVI-DTILNFINDKIKMLN 631
NL KI ++ + DKE +K K+ N+ LKN I LN IN + +N
Sbjct: 342 NLGNNSILKIENSTVICKNYDKEFFIKGEDLKKSNIYLKNTIFIDCLNCINSDVINVN 399
>UniRef50_Q8I5C8 Cluster: Putative uncharacterized protein; n=3;
Plasmodium|Rep: Putative uncharacterized protein -
Plasmodium falciparum (isolate 3D7)
Length = 1834
Score = 33.9 bits (74), Expect = 3.7
Identities = 25/105 (23%), Positives = 48/105 (45%), Gaps = 4/105 (3%)
Frame = +2
Query: 341 SLDMEFDSIENQTLLIDPQELCRRMLELRSVTKETLQLTINFYT---NMMNLPEYKIPRM 511
+++M + N +D C LE++ + K ++ T N NL + KI
Sbjct: 605 NVNMYANMYANMYANMDAHNYCNSFLEIKDMIKNIVKKCKEGDTDNINNNNLNDNKIRNS 664
Query: 512 VMLPRDKELKNIRKKEK-NLMLKNVIDTILNFINDKIKMLNGDYV 643
+ E K ++KEK N+ KN++ I++ I + +L+ Y+
Sbjct: 665 CEEDEENEKKKKKRKEKKNIFRKNMLKNIMHSIENNENLLDSFYL 709
>UniRef50_P17965 Cluster: RNA replication protein (147 kDa protein)
(ORF 1 protein) [Includes: RNA-directed RNA polymerase
(EC 2.7.7.48); Helicase (EC 3.6.1.-)]; n=10;
Carlavirus|Rep: RNA replication protein (147 kDa
protein) (ORF 1 protein) [Includes: RNA-directed RNA
polymerase (EC 2.7.7.48); Helicase (EC 3.6.1.-)] -
Potato virus M (strain Russian) (PVM)
Length = 1968
Score = 33.9 bits (74), Expect = 3.7
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 7/82 (8%)
Frame = -1
Query: 510 MRGILYSGKFIMLV*KFIVNCSVSLVT-DRSS-----SMRLHSSWGSMRSVWFSIESNSM 349
++G++ S + + V + + SV L T DRS+ S L + WG SVW +E NS+
Sbjct: 682 VQGVVLSNQAGLNVREQVAGASVGLYTKDRSNLKWGNSELLSNGWGRSLSVW--MEINSV 739
Query: 348 SNEYDMSSR*TSSTE-QYTILI 286
S ++D++ R + S E Q +L+
Sbjct: 740 SQKFDVAVRLSYSKETQMNVLL 761
>UniRef50_Q4FMH9 Cluster: Putative uncharacterized protein; n=1;
Candidatus Pelagibacter ubique HTCC1062|Rep: Putative
uncharacterized protein - Pelagibacter ubique
Length = 156
Score = 33.5 bits (73), Expect = 4.9
Identities = 24/71 (33%), Positives = 37/71 (52%)
Frame = +2
Query: 392 PQELCRRMLELRSVTKETLQLTINFYTNMMNLPEYKIPRMVMLPRDKELKNIRKKEKNLM 571
P+E RR +E+ + K+ L I+ T M LP K ++ + ELK + K KNL
Sbjct: 91 PKETVRRKIEI--LKKKKL---ISHSTKMGLLPTNKTEEIMKPFAEIELKTLSKFLKNLK 145
Query: 572 LKNVIDTILNF 604
N ++ +LNF
Sbjct: 146 KNNTLEKVLNF 156
>UniRef50_A2FKT9 Cluster: Viral A-type inclusion protein, putative;
n=1; Trichomonas vaginalis G3|Rep: Viral A-type
inclusion protein, putative - Trichomonas vaginalis G3
Length = 2114
Score = 33.5 bits (73), Expect = 4.9
Identities = 28/98 (28%), Positives = 47/98 (47%), Gaps = 7/98 (7%)
Frame = +2
Query: 365 IENQTLLIDPQELCRRMLELRSVTKETLQLTINFYTNMMNLPEYKIPRMVMLPRDKELKN 544
+ENQ + D L R+ LE + + +L N ++ N P KI M + + +L
Sbjct: 557 VENQNKISDQICLLRKQLEEQKYSYNSLLEEENKLFDLENAPLDKIYEMEVEMLNNQLSM 616
Query: 545 IRKKEKNLMLKNVIDTI-------LNFINDKIKMLNGD 637
I K+ +N L++ +D++ N +NDKI L D
Sbjct: 617 IDKQRQN--LQSELDSVNHKHYETTNMLNDKISKLESD 652
>UniRef50_A0DCS4 Cluster: Chromosome undetermined scaffold_46, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_46,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 408
Score = 33.5 bits (73), Expect = 4.9
Identities = 23/93 (24%), Positives = 46/93 (49%)
Frame = -3
Query: 544 IFELLVARQHNHAGNFVFGQIHHVGVKVYSQL*RFFGDRSKFEHAPAQFLGIDEKCLVFY 365
+ E VA Q+ NF +H G + S L + KF+ A +F + +++
Sbjct: 167 LIEEAVATQNMILQNFDIADLHIKGQLMLS-LGNLYRILLKFQDAADKFY---QALILYE 222
Query: 364 RVKLHVQRVRHVFQVNIVYRAVHNFNKSRLVTF 266
R+ VQ+ + Q+ IVY ++++ ++L+T+
Sbjct: 223 RLNWKVQQADCLLQLGIVYALINDYESAKLITY 255
>UniRef50_A0BJS8 Cluster: Chromosome undetermined scaffold_110,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_110,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 1646
Score = 33.5 bits (73), Expect = 4.9
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = +2
Query: 179 RQRCTPDEVKNNSLWSKYMFPKP--FAPTTLKSYKSRFIKIVYCSVDD 316
+ +CT D NN +W F K FAP T +++ ++ C +DD
Sbjct: 72 QDQCTVDAFNNNCIWKSNCFVKQCVFAPKTFQTHSECETYLMECGLDD 119
>UniRef50_UPI00015282EF Cluster: UPI00015282EF related cluster; n=1;
unknown|Rep: UPI00015282EF UniRef100 entry - unknown
Length = 244
Score = 33.1 bits (72), Expect = 6.5
Identities = 40/156 (25%), Positives = 70/156 (44%), Gaps = 17/156 (10%)
Frame = +2
Query: 218 LWSKYMFPKPFAPTTLKS----YKSRFIKIVYCSVDDVHLEDMSYSLDMEFDSIENQTLL 385
L+S+ K F P S +K++ + ++YC+ DD H E + S+ ++ + E T++
Sbjct: 77 LFSRKKLAKKFTPIINSSLSDEFKNKRVVLLYCTCDDFHEESLLSSMKQDYYNYE--TVI 134
Query: 386 ID---PQELCRRMLE------LRSVTKETLQ--LTINFYTNMMNLPEYKIPRMVMLPRDK 532
+D +E +R+ E LR V +E + N + N +Y V+L D+
Sbjct: 135 LDDSKSEEYKKRVDEFAKEHGLRVVRRENKEGFKAGNLNNYLRNNDDYDY--FVVLDSDE 192
Query: 533 ELKN--IRKKEKNLMLKNVIDTILNFINDKIKMLNG 634
L N I + K N I + + +K KM G
Sbjct: 193 VLPNDFITQSLKYFQFNNKIGALQAYHINKTKMNGG 228
>UniRef50_UPI00006CE5B4 Cluster: hypothetical protein
TTHERM_00145660; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00145660 - Tetrahymena
thermophila SB210
Length = 2713
Score = 33.1 bits (72), Expect = 6.5
Identities = 21/52 (40%), Positives = 32/52 (61%), Gaps = 3/52 (5%)
Frame = +2
Query: 497 KIPRMVMLPRDKELKNIRKKEKNLMLKNV--IDTIL-NFINDKIKMLNGDYV 643
++ ++ L +++ K I KK+ L LKN+ ID IL +FIN K + LN D V
Sbjct: 316 QLQKIESLECERQQKEITKKDTELFLKNLGEIDLILKHFINGKPENLNWDQV 367
>UniRef50_Q5CSZ7 Cluster: Putative uncharacterized protein; n=2;
Cryptosporidium|Rep: Putative uncharacterized protein -
Cryptosporidium parvum Iowa II
Length = 251
Score = 33.1 bits (72), Expect = 6.5
Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 8/97 (8%)
Frame = +2
Query: 368 ENQTLLIDPQELCRRMLELRSVTKETLQLTINFYTNMMNLPEYKIPRMVM------LPRD 529
E + + ID ELC+ +R+ ++ ++ + + YTN NL K+ + +P
Sbjct: 46 EEEKIFIDSFELCKGAKSIRNKRRK-IEDSNSSYTNSENLNHRKLTGTIAQYLLSRVPLP 104
Query: 530 KELKNIRKK--EKNLMLKNVIDTILNFINDKIKMLNG 634
+I+KK + K +D+ILN INDK K G
Sbjct: 105 TSRVDIQKKFIKPEGSKKIDLDSILNTINDKFKSCMG 141
>UniRef50_UPI00006CBFF5 Cluster: hypothetical protein
TTHERM_00411310; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00411310 - Tetrahymena
thermophila SB210
Length = 651
Score = 32.7 bits (71), Expect = 8.6
Identities = 37/166 (22%), Positives = 68/166 (40%), Gaps = 11/166 (6%)
Frame = +2
Query: 200 EVKNNSLWSKY---MFPKPFAPTTLKSYKSRFIKIVYCSVDDVHLEDMSYSLDMEFDSIE 370
+V NN SK MFP PF P+ ++S F ++ H + + Y + I
Sbjct: 362 QVLNNQSASKVVINMFPLPFNPSLIESCVEYFYQLYVSKKKYEHYKKVKYENIQHINLIS 421
Query: 371 NQTLLIDPQELCRRMLELRSVTKETLQLTINFYTNMMNLPE-----YKIPRMVMLPRDKE 535
Q L Q + + ++ + T+Q+ Y +LP KI + R E
Sbjct: 422 EQQELQSIQNVQDQDIQYQRKQALTIQIVRKRYQKNKDLPNKRKYVQKIKDISQEIRKIE 481
Query: 536 LKNIRKKEKNLMLKNVIDTILNFINDKIKMLNG---DYVHDRGLIR 664
N++ +E + +++ + F K++ L D +++ LIR
Sbjct: 482 SYNLKVEEYKVFCQSIYELEFEFPLQKLEPLQAIIWDKLNEAILIR 527
>UniRef50_A2BV45 Cluster: Putative uncharacterized protein; n=4;
Prochlorococcus marinus|Rep: Putative uncharacterized
protein - Prochlorococcus marinus (strain MIT 9515)
Length = 654
Score = 32.7 bits (71), Expect = 8.6
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Frame = +2
Query: 422 LRSVTKETLQLTI-NFYTNMMNLPEY---KIPRMVMLPRDKELKNIRKKEKNLMLKNVID 589
LR + E Q+ I N T+ ++ P+ + RM+ L R + K I+ K +N L+ VID
Sbjct: 490 LRGIRYELRQILIQNLLTSFVSRPDEGPEMLRRMLNLGRGMKQKKIQSKARNSSLEVVID 549
Query: 590 TILNFINDK 616
+F N K
Sbjct: 550 RQRSFFNKK 558
>UniRef50_Q8IM29 Cluster: Putative uncharacterized protein; n=1;
Plasmodium falciparum 3D7|Rep: Putative uncharacterized
protein - Plasmodium falciparum (isolate 3D7)
Length = 1527
Score = 32.7 bits (71), Expect = 8.6
Identities = 28/83 (33%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
Frame = +2
Query: 389 DPQELCRRMLELRSVTKETLQLT--INFYTNMMNLPEYKIPRMVMLPRDKELKNIRKKEK 562
D +E+ ++ KE L+L IN N M+L E K + ELK + KKEK
Sbjct: 1004 DNEEILIDFFYVQKKNKEYLELEKKINNLKNQMDL-EMKNKESIY---KNELKKL-KKEK 1058
Query: 563 NLMLKNVIDTILNFINDKIKMLN 631
NL +KN++ + + +K KM N
Sbjct: 1059 NLEIKNLMKINKSLVKEKEKMEN 1081
>UniRef50_A1Z6X9 Cluster: CG11112-PB, isoform B; n=2; Drosophila
melanogaster|Rep: CG11112-PB, isoform B - Drosophila
melanogaster (Fruit fly)
Length = 409
Score = 32.7 bits (71), Expect = 8.6
Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Frame = +2
Query: 398 ELCRRMLELRSVTKETLQLTINFYTNMMNLPEYKIP--RMVMLPRDKELKNIRKKEKN 565
+LC+ E V + IN TN +++PE ++P +V++ +KEL ++K KN
Sbjct: 51 KLCKSETEKGFVNPKQTISNINTITNNISMPEIQLPPITVVIVKDEKELAKYQEKSKN 108
>UniRef50_A7TI79 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 962
Score = 32.7 bits (71), Expect = 8.6
Identities = 35/129 (27%), Positives = 65/129 (50%), Gaps = 5/129 (3%)
Frame = +2
Query: 257 TTLKSYKSRFIKIVYCSVDDVHLEDMSYSLDMEFDSIENQTLLIDPQELCRRMLELRSVT 436
TTL+ K F ++ V + L+ M S+ M + +IE Q +L +L+ T
Sbjct: 493 TTLRKDKRAFEEVN--EVQRIKLQSMRDSVSMMYTNIEKQQRR--EHDLINSTDKLKE-T 547
Query: 437 KETLQLTINFYTNMMNLPEYKIPRMVM--LPRDKE--LKNIRKKEKNLMLKNV-IDTILN 601
+ +TI YT+ + + ++ + L + K LKN+R+ EKN ++ N+ I+ LN
Sbjct: 548 VNNMNVTIARYTDRESSVQTQMKTLFNEELSKLKSMLLKNLRQFEKNELIDNLEIENNLN 607
Query: 602 FINDKIKML 628
+++IK +
Sbjct: 608 KAHEEIKQI 616
>UniRef50_P62422 Cluster: Phosphoglycerate kinase; n=5;
Wolbachia|Rep: Phosphoglycerate kinase - Wolbachia
pipientis wMel
Length = 398
Score = 32.7 bits (71), Expect = 8.6
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +2
Query: 548 RKKEKNLMLKNVIDTILNFINDKIKMLN 631
+ ++ NL LKNVIDT+ +N K+K ++
Sbjct: 64 KARDNNLSLKNVIDTLSQLLNKKVKFID 91
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 647,257,556
Number of Sequences: 1657284
Number of extensions: 13365832
Number of successful extensions: 39544
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 37900
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39507
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 53305790091
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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