Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc28f15
         (684 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT022977-1|AAY55393.1|  159|Drosophila melanogaster IP04201p pro...    33   0.48 
AE013599-400|AAF59265.1|  159|Drosophila melanogaster CG11112-PA...    33   0.48 
AE013599-399|AAM68891.2|  409|Drosophila melanogaster CG11112-PB...    33   0.48 
BT012305-1|AAS77430.1|  255|Drosophila melanogaster LP21877p pro...    29   5.9  
AE013599-2588|AAM68478.1|  614|Drosophila melanogaster CG30110-P...    29   5.9  
BT022749-1|AAY55165.1|  674|Drosophila melanogaster IP14655p pro...    29   7.8  
AY089420-1|AAL90158.1|  679|Drosophila melanogaster AT24439p pro...    29   7.8  
AJ243904-1|CAB64937.1|  773|Drosophila melanogaster SF1 protein ...    29   7.8  
AE013599-2845|AAF57589.2|  674|Drosophila melanogaster CG7229-PA...    29   7.8  

>BT022977-1|AAY55393.1|  159|Drosophila melanogaster IP04201p
           protein.
          Length = 159

 Score = 32.7 bits (71), Expect = 0.48
 Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
 Frame = +2

Query: 398 ELCRRMLELRSVTKETLQLTINFYTNMMNLPEYKIP--RMVMLPRDKELKNIRKKEKN 565
           +LC+   E   V  +     IN  TN +++PE ++P   +V++  +KEL   ++K KN
Sbjct: 51  KLCKSETEKGFVNPKQTISNINTITNNISMPEIQLPPITVVIVKDEKELAKYQEKSKN 108


>AE013599-400|AAF59265.1|  159|Drosophila melanogaster CG11112-PA,
           isoform A protein.
          Length = 159

 Score = 32.7 bits (71), Expect = 0.48
 Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
 Frame = +2

Query: 398 ELCRRMLELRSVTKETLQLTINFYTNMMNLPEYKIP--RMVMLPRDKELKNIRKKEKN 565
           +LC+   E   V  +     IN  TN +++PE ++P   +V++  +KEL   ++K KN
Sbjct: 51  KLCKSETEKGFVNPKQTISNINTITNNISMPEIQLPPITVVIVKDEKELAKYQEKSKN 108


>AE013599-399|AAM68891.2|  409|Drosophila melanogaster CG11112-PB,
           isoform B protein.
          Length = 409

 Score = 32.7 bits (71), Expect = 0.48
 Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
 Frame = +2

Query: 398 ELCRRMLELRSVTKETLQLTINFYTNMMNLPEYKIP--RMVMLPRDKELKNIRKKEKN 565
           +LC+   E   V  +     IN  TN +++PE ++P   +V++  +KEL   ++K KN
Sbjct: 51  KLCKSETEKGFVNPKQTISNINTITNNISMPEIQLPPITVVIVKDEKELAKYQEKSKN 108


>BT012305-1|AAS77430.1|  255|Drosophila melanogaster LP21877p
           protein.
          Length = 255

 Score = 29.1 bits (62), Expect = 5.9
 Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
 Frame = +2

Query: 458 INFYTNMMNLPEYKIPRMVMLPRDKELKNIRKKE-KNLMLKNVIDTILNFINDKIKMLNG 634
           ++  TN  N PE  +   VM P   +  N  K   KN++ K V+  IL   N  +K+   
Sbjct: 115 VDLKTNGSNKPEGNLVN-VMEPNSHKSSNTPKNSTKNIIRKIVVPNILKINNPTVKIPAT 173

Query: 635 DYVHDRGL 658
             VH   +
Sbjct: 174 GIVHSNSM 181


>AE013599-2588|AAM68478.1|  614|Drosophila melanogaster CG30110-PA
           protein.
          Length = 614

 Score = 29.1 bits (62), Expect = 5.9
 Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
 Frame = +2

Query: 458 INFYTNMMNLPEYKIPRMVMLPRDKELKNIRKKE-KNLMLKNVIDTILNFINDKIKMLNG 634
           ++  TN  N PE  +   VM P   +  N  K   KN++ K V+  IL   N  +K+   
Sbjct: 115 VDLKTNGSNKPEGNLVN-VMEPNSHKSSNTPKNSTKNIIRKIVVPNILKINNPTVKIPAT 173

Query: 635 DYVHDRGL 658
             VH   +
Sbjct: 174 GIVHSNSM 181


>BT022749-1|AAY55165.1|  674|Drosophila melanogaster IP14655p
           protein.
          Length = 674

 Score = 28.7 bits (61), Expect = 7.8
 Identities = 13/36 (36%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
 Frame = +2

Query: 404 CRRMLE-LRSVTKETLQLTINFYTNMMNLPEYKIPR 508
           CR +L+ L+S+T +T  +T NF++N  +  + K+ R
Sbjct: 168 CRELLKKLQSITNQTDAMTRNFFSNKWDSLQKKVDR 203


>AY089420-1|AAL90158.1|  679|Drosophila melanogaster AT24439p
           protein.
          Length = 679

 Score = 28.7 bits (61), Expect = 7.8
 Identities = 13/36 (36%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
 Frame = +2

Query: 404 CRRMLE-LRSVTKETLQLTINFYTNMMNLPEYKIPR 508
           CR +L+ L+S+T +T  +T NF++N  +  + K+ R
Sbjct: 168 CRELLKKLQSITNQTDAMTRNFFSNKWDSLQKKVDR 203


>AJ243904-1|CAB64937.1|  773|Drosophila melanogaster SF1 protein
           protein.
          Length = 773

 Score = 28.7 bits (61), Expect = 7.8
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = +3

Query: 138 PLPGSSPCSIWPPIGSDARPTR 203
           P+PG+ P  I PP G+ ARP R
Sbjct: 724 PIPGTLPPLIPPPPGTSARPCR 745


>AE013599-2845|AAF57589.2|  674|Drosophila melanogaster CG7229-PA
           protein.
          Length = 674

 Score = 28.7 bits (61), Expect = 7.8
 Identities = 13/36 (36%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
 Frame = +2

Query: 404 CRRMLE-LRSVTKETLQLTINFYTNMMNLPEYKIPR 508
           CR +L+ L+S+T +T  +T NF++N  +  + K+ R
Sbjct: 168 CRELLKKLQSITNQTDAMTRNFFSNKWDSLQKKVDR 203


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,121,288
Number of Sequences: 53049
Number of extensions: 631317
Number of successful extensions: 1473
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1424
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1473
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2992560750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)