Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc28f08
(614 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY070532-1|AAL48003.1| 531|Drosophila melanogaster GM14334p pro... 95 9e-20
AF113612-1|AAD21582.1| 531|Drosophila melanogaster aspartyl tRN... 95 9e-20
AE013599-1606|AAF58445.1| 531|Drosophila melanogaster CG3821-PA... 95 9e-20
BT001693-1|AAN71448.1| 677|Drosophila melanogaster RE59077p pro... 29 6.6
AF395331-1|AAK77868.1| 677|Drosophila melanogaster transmembran... 29 6.6
AE013599-3375|AAF46830.1| 677|Drosophila melanogaster CG3413-PD... 29 6.6
AE013599-3374|AAM68220.1| 677|Drosophila melanogaster CG3413-PC... 29 6.6
AE013599-3373|AAF46829.1| 677|Drosophila melanogaster CG3413-PB... 29 6.6
AE013599-3372|AAM68219.1| 677|Drosophila melanogaster CG3413-PA... 29 6.6
>AY070532-1|AAL48003.1| 531|Drosophila melanogaster GM14334p
protein.
Length = 531
Score = 94.7 bits (225), Expect = 9e-20
Identities = 49/96 (51%), Positives = 64/96 (66%)
Frame = +3
Query: 327 ESEPDFSEGLYGNMKMIQSSGEHRDRVYTDVENLSIKMDGQTVWVRARLQTSRAKGKQCF 506
+S D + G YG +MIQS + +R + V LS ++ VWVR R+ TSRAKGKQCF
Sbjct: 47 DSAEDHAAGRYGLSEMIQSKDKRSERNFVPVSELSGQVGKGLVWVRGRVHTSRAKGKQCF 106
Query: 507 AVLRQTSSTVQLLVSVNEQRKISKQMVKFTGNITRE 614
+LRQ SSTVQ +++V + ISKQMVKF GNI +E
Sbjct: 107 LILRQQSSTVQCILAVGD--VISKQMVKFAGNIPKE 140
>AF113612-1|AAD21582.1| 531|Drosophila melanogaster aspartyl tRNA
synthetase protein.
Length = 531
Score = 94.7 bits (225), Expect = 9e-20
Identities = 49/96 (51%), Positives = 64/96 (66%)
Frame = +3
Query: 327 ESEPDFSEGLYGNMKMIQSSGEHRDRVYTDVENLSIKMDGQTVWVRARLQTSRAKGKQCF 506
+S D + G YG +MIQS + +R + V LS ++ VWVR R+ TSRAKGKQCF
Sbjct: 47 DSAEDHAAGRYGLSEMIQSKDKRSERNFVPVSELSGQVGKGLVWVRGRVHTSRAKGKQCF 106
Query: 507 AVLRQTSSTVQLLVSVNEQRKISKQMVKFTGNITRE 614
+LRQ SSTVQ +++V + ISKQMVKF GNI +E
Sbjct: 107 LILRQQSSTVQCILAVGD--VISKQMVKFAGNIPKE 140
>AE013599-1606|AAF58445.1| 531|Drosophila melanogaster CG3821-PA
protein.
Length = 531
Score = 94.7 bits (225), Expect = 9e-20
Identities = 49/96 (51%), Positives = 64/96 (66%)
Frame = +3
Query: 327 ESEPDFSEGLYGNMKMIQSSGEHRDRVYTDVENLSIKMDGQTVWVRARLQTSRAKGKQCF 506
+S D + G YG +MIQS + +R + V LS ++ VWVR R+ TSRAKGKQCF
Sbjct: 47 DSAEDHAAGRYGLSEMIQSKDKRSERNFVPVSELSGQVGKGLVWVRGRVHTSRAKGKQCF 106
Query: 507 AVLRQTSSTVQLLVSVNEQRKISKQMVKFTGNITRE 614
+LRQ SSTVQ +++V + ISKQMVKF GNI +E
Sbjct: 107 LILRQQSSTVQCILAVGD--VISKQMVKFAGNIPKE 140
>BT001693-1|AAN71448.1| 677|Drosophila melanogaster RE59077p
protein.
Length = 677
Score = 28.7 bits (61), Expect = 6.6
Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
Frame = -1
Query: 584 HLLADLPLLINANQQLNCARGLPQHSKALLAFSSRSLQ-TGSNPNGLTVHFDTQILNISV 408
HLL LP L +A+ N + L K L + + Q T L H Q+LN+
Sbjct: 86 HLLDKLPELTSADLSHNQLKDLGHLGKGLKRLNLKHNQLTSDKLRKLPQHL--QVLNLQH 143
Query: 407 NPVTMFT*RLDHFH 366
N +T L H H
Sbjct: 144 NNITHLPLELTHMH 157
>AF395331-1|AAK77868.1| 677|Drosophila melanogaster transmembrane
protein windpipe protein.
Length = 677
Score = 28.7 bits (61), Expect = 6.6
Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
Frame = -1
Query: 584 HLLADLPLLINANQQLNCARGLPQHSKALLAFSSRSLQ-TGSNPNGLTVHFDTQILNISV 408
HLL LP L +A+ N + L K L + + Q T L H Q+LN+
Sbjct: 86 HLLDKLPELTSADLSHNQLKDLGHLGKGLKRLNLKHNQLTSDKLRKLPQHL--QVLNLQH 143
Query: 407 NPVTMFT*RLDHFH 366
N +T L H H
Sbjct: 144 NNITHLPLELTHMH 157
>AE013599-3375|AAF46830.1| 677|Drosophila melanogaster CG3413-PD,
isoform D protein.
Length = 677
Score = 28.7 bits (61), Expect = 6.6
Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
Frame = -1
Query: 584 HLLADLPLLINANQQLNCARGLPQHSKALLAFSSRSLQ-TGSNPNGLTVHFDTQILNISV 408
HLL LP L +A+ N + L K L + + Q T L H Q+LN+
Sbjct: 86 HLLDKLPELTSADLSHNQLKDLGHLGKGLKRLNLKHNQLTSDKLRKLPQHL--QVLNLQH 143
Query: 407 NPVTMFT*RLDHFH 366
N +T L H H
Sbjct: 144 NNITHLPLELTHMH 157
>AE013599-3374|AAM68220.1| 677|Drosophila melanogaster CG3413-PC,
isoform C protein.
Length = 677
Score = 28.7 bits (61), Expect = 6.6
Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
Frame = -1
Query: 584 HLLADLPLLINANQQLNCARGLPQHSKALLAFSSRSLQ-TGSNPNGLTVHFDTQILNISV 408
HLL LP L +A+ N + L K L + + Q T L H Q+LN+
Sbjct: 86 HLLDKLPELTSADLSHNQLKDLGHLGKGLKRLNLKHNQLTSDKLRKLPQHL--QVLNLQH 143
Query: 407 NPVTMFT*RLDHFH 366
N +T L H H
Sbjct: 144 NNITHLPLELTHMH 157
>AE013599-3373|AAF46829.1| 677|Drosophila melanogaster CG3413-PB,
isoform B protein.
Length = 677
Score = 28.7 bits (61), Expect = 6.6
Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
Frame = -1
Query: 584 HLLADLPLLINANQQLNCARGLPQHSKALLAFSSRSLQ-TGSNPNGLTVHFDTQILNISV 408
HLL LP L +A+ N + L K L + + Q T L H Q+LN+
Sbjct: 86 HLLDKLPELTSADLSHNQLKDLGHLGKGLKRLNLKHNQLTSDKLRKLPQHL--QVLNLQH 143
Query: 407 NPVTMFT*RLDHFH 366
N +T L H H
Sbjct: 144 NNITHLPLELTHMH 157
>AE013599-3372|AAM68219.1| 677|Drosophila melanogaster CG3413-PA,
isoform A protein.
Length = 677
Score = 28.7 bits (61), Expect = 6.6
Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
Frame = -1
Query: 584 HLLADLPLLINANQQLNCARGLPQHSKALLAFSSRSLQ-TGSNPNGLTVHFDTQILNISV 408
HLL LP L +A+ N + L K L + + Q T L H Q+LN+
Sbjct: 86 HLLDKLPELTSADLSHNQLKDLGHLGKGLKRLNLKHNQLTSDKLRKLPQHL--QVLNLQH 143
Query: 407 NPVTMFT*RLDHFH 366
N +T L H H
Sbjct: 144 NNITHLPLELTHMH 157
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,880,888
Number of Sequences: 53049
Number of extensions: 373035
Number of successful extensions: 750
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 722
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 747
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2517878700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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