Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc28f04
(567 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9Y284 Cluster: UPF0139 protein C19orf56; n=15; Coeloma... 166 4e-40
UniRef50_Q9VRJ8 Cluster: UPF0139 protein CG10674; n=19; Eumetazo... 159 6e-38
UniRef50_Q9SD88 Cluster: UPF0139 protein At5g07960; n=4; Magnoli... 62 9e-09
UniRef50_A7PDD0 Cluster: Chromosome chr17 scaffold_12, whole gen... 57 3e-07
UniRef50_A5B7C7 Cluster: Putative uncharacterized protein; n=1; ... 49 7e-05
UniRef50_UPI00006CB667 Cluster: hypothetical protein TTHERM_0044... 46 8e-04
UniRef50_Q553E6 Cluster: Putative uncharacterized protein; n=2; ... 40 0.054
UniRef50_P10474 Cluster: Endoglucanase/exoglucanase B precursor ... 36 0.66
UniRef50_Q38CF6 Cluster: Putative uncharacterized protein; n=1; ... 33 4.7
>UniRef50_Q9Y284 Cluster: UPF0139 protein C19orf56; n=15;
Coelomata|Rep: UPF0139 protein C19orf56 - Homo sapiens
(Human)
Length = 106
Score = 166 bits (403), Expect = 4e-40
Identities = 74/100 (74%), Positives = 86/100 (86%), Gaps = 1/100 (1%)
Frame = +3
Query: 198 ADPRRADRERRYKPPPPTSAPA-EDLTTDYMNILGMVFSMCGLMMRLKWCAWTAVFCSSI 374
+DPRR ++ RYKPPP PA +D T DYMN+LGM+FSMCGLM++LKWCAW AV+CS I
Sbjct: 7 SDPRRPNKVLRYKPPPSECNPALDDPTPDYMNLLGMIFSMCGLMLKLKWCAWVAVYCSFI 66
Query: 375 SFANSRVSDDTKQIVSSFMLSISAVVMSYLQNPAPMTPPW 494
SFANSR S+DTKQ++SSFMLSISAVVMSYLQNP PMTPPW
Sbjct: 67 SFANSRSSEDTKQMMSSFMLSISAVVMSYLQNPQPMTPPW 106
>UniRef50_Q9VRJ8 Cluster: UPF0139 protein CG10674; n=19;
Eumetazoa|Rep: UPF0139 protein CG10674 - Drosophila
melanogaster (Fruit fly)
Length = 108
Score = 159 bits (385), Expect = 6e-38
Identities = 71/108 (65%), Positives = 86/108 (79%), Gaps = 3/108 (2%)
Frame = +3
Query: 186 MQLSADPRRADRERRYKPPP---PTSAPAEDLTTDYMNILGMVFSMCGLMMRLKWCAWTA 356
M ++ DPRR ++ RYK P + ED+ DYMNILGM+FSMCGLMM+LKWCAW A
Sbjct: 1 MNMTVDPRRKEKINRYKAPKNQGQSGGANEDMMPDYMNILGMIFSMCGLMMKLKWCAWFA 60
Query: 357 VFCSSISFANSRVSDDTKQIVSSFMLSISAVVMSYLQNPAPMTPPWAA 500
++CS ISFA+SR SDD KQ++SSFMLS+SAVVMSYLQNPA MTPPWA+
Sbjct: 61 LYCSCISFASSRASDDAKQVLSSFMLSVSAVVMSYLQNPAAMTPPWAS 108
>UniRef50_Q9SD88 Cluster: UPF0139 protein At5g07960; n=4;
Magnoliophyta|Rep: UPF0139 protein At5g07960 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 107
Score = 62.1 bits (144), Expect = 9e-09
Identities = 35/96 (36%), Positives = 51/96 (53%), Gaps = 1/96 (1%)
Frame = +3
Query: 201 DPRRADRERRYKPPPPTSAPAEDLTTDYMNILGMVFSMCGLMMRLKWCAWTAVFCSSISF 380
DPR+ + Y P P AP EDL DY + ++ + G+M R K C+W A+ + S
Sbjct: 13 DPRQPSAAKPYIPRPV--AP-EDLPVDYSGFIAVILGVSGVMFRYKICSWLAIIFCAQSL 69
Query: 381 ANSR-VSDDTKQIVSSFMLSISAVVMSYLQNPAPMT 485
AN R + +D KQI + M +I +V +YL P T
Sbjct: 70 ANMRNLENDLKQISMAMMFAIMGLVTNYLGPNRPAT 105
>UniRef50_A7PDD0 Cluster: Chromosome chr17 scaffold_12, whole genome
shotgun sequence; n=4; Magnoliophyta|Rep: Chromosome
chr17 scaffold_12, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 109
Score = 57.2 bits (132), Expect = 3e-07
Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Frame = +3
Query: 201 DPRRADRERRYKPPPPTSAPAEDLTTDYMNILGMVFSMCGLMMRLKWCAWTAVFCSSISF 380
DPR+ Y P EDL DY + ++F++ GLM R K C+W A+ + S
Sbjct: 13 DPRQPSTANPYVAP---MVRPEDLPVDYSGFIAVIFAIVGLMFRYKLCSWLAIIFCAQSL 69
Query: 381 ANSR-VSDDTKQIVSSFMLSISAVVMSYL 464
+N R +D KQI + M +I ++ +YL
Sbjct: 70 SNMRNFENDLKQISMAMMFAIMGLMTNYL 98
>UniRef50_A5B7C7 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 116
Score = 49.2 bits (112), Expect = 7e-05
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Frame = +3
Query: 201 DPRRADRERRYKPPPPTSAPAEDLTTDYMNILGMVFSMCGLMMRLKWCAWTAVFCSSISF 380
DPR+ Y P EDL DY + ++F++ GLM R K C+W A+ + S
Sbjct: 13 DPRQPSTANPYVAP---MVRPEDLPVDYSGFIAVIFAIVGLMFRYKLCSWLAIIFCAQSL 69
Query: 381 ANSR-VSDDTKQI 416
+N R +D KQI
Sbjct: 70 SNMRNFENDLKQI 82
>UniRef50_UPI00006CB667 Cluster: hypothetical protein
TTHERM_00446120; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00446120 - Tetrahymena
thermophila SB210
Length = 121
Score = 45.6 bits (103), Expect = 8e-04
Identities = 25/94 (26%), Positives = 45/94 (47%)
Frame = +3
Query: 192 LSADPRRADRERRYKPPPPTSAPAEDLTTDYMNILGMVFSMCGLMMRLKWCAWTAVFCSS 371
+S RR++ + Y P P + + D IL + G+MM++ C W A+F
Sbjct: 1 MSTRDRRSEEKIIYYQPAPQTEDQQG--GDLQQILSFILGFVGIMMKI--CLWVALFMLL 56
Query: 372 ISFANSRVSDDTKQIVSSFMLSISAVVMSYLQNP 473
+FAN + + D KQ++ + + + +V Y P
Sbjct: 57 SNFANIKQTSDVKQMIINAGIIVMGMVSLYYWQP 90
>UniRef50_Q553E6 Cluster: Putative uncharacterized protein; n=2;
Dictyostelium discoideum|Rep: Putative uncharacterized
protein - Dictyostelium discoideum AX4
Length = 98
Score = 39.5 bits (88), Expect = 0.054
Identities = 22/90 (24%), Positives = 44/90 (48%), Gaps = 2/90 (2%)
Frame = +3
Query: 198 ADPRRADR-ERRYKPPPPTSAPAEDLTTDYMNILGMVFSMCGLMMRLKWCAWTAVFCSSI 374
+DPR+ R++ T +L + ++ ++F G+M++ K C W + C
Sbjct: 2 SDPRKESLIVERFEMRASTEPKEGEL--ELYSLFSIIFGFLGIMLKYKICLWVSAVCCVA 59
Query: 375 SFANSRVSDDT-KQIVSSFMLSISAVVMSY 461
+N + D + + I+S LS+ +VM+Y
Sbjct: 60 YLSNLKSKDSSVRTILSPVSLSLMGLVMAY 89
>UniRef50_P10474 Cluster: Endoglucanase/exoglucanase B precursor
[Includes: Endoglucanase (EC 3.2.1.4)
(Endo-1,4-beta-glucanase) (Cellulase)
(Cellobiohydrolase); Exoglucanase (EC 3.2.1.91)
(Exocellobiohydrolase) (1,4-beta-cellobiohydrolase)];
n=5; root|Rep: Endoglucanase/exoglucanase B precursor
[Includes: Endoglucanase (EC 3.2.1.4)
(Endo-1,4-beta-glucanase) (Cellulase)
(Cellobiohydrolase); Exoglucanase (EC 3.2.1.91)
(Exocellobiohydrolase) (1,4-beta-cellobiohydrolase)] -
Caldocellum saccharolyticum (Caldicellulosiruptor
saccharolyticus)
Length = 1039
Score = 35.9 bits (79), Expect = 0.66
Identities = 20/64 (31%), Positives = 33/64 (51%)
Frame = +2
Query: 2 ECQQSILSFIKIVQITVYLSILNYILTA*NRRTNYKTYPNLFVNKKSNRYKYLWAYNKKW 181
E + SI F I I ++++ L+ L NY T P + K+S +YK ++ KK+
Sbjct: 265 EIENSIKLFSSIPGIEIHITELDMSLYNYGSSENYSTPPQDLLQKQSQKYKEIFTMLKKY 324
Query: 182 KDAV 193
K+ V
Sbjct: 325 KNVV 328
>UniRef50_Q38CF6 Cluster: Putative uncharacterized protein; n=1;
Trypanosoma brucei|Rep: Putative uncharacterized protein
- Trypanosoma brucei
Length = 1719
Score = 33.1 bits (72), Expect = 4.7
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +3
Query: 243 PPTSAPAEDLTTDYMNILGMVFSMCGLMMRLKWCAWTA 356
P T P +DLTT G + S+C + + W WTA
Sbjct: 317 PKTLTPLKDLTTHMATDPGSMLSICKVKQLVSWKVWTA 354
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 533,885,005
Number of Sequences: 1657284
Number of extensions: 10248374
Number of successful extensions: 35982
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 34082
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35877
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 38321472724
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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