Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc28f04
(567 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 22 3.2
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 22 3.2
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 22 3.2
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 22 3.2
DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulati... 21 5.6
AM292360-1|CAL23172.2| 427|Tribolium castaneum gustatory recept... 21 5.6
AM292331-1|CAL23143.2| 437|Tribolium castaneum gustatory recept... 21 5.6
AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase ... 21 7.3
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 21 7.3
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 21 7.3
AM292380-1|CAL23192.2| 489|Tribolium castaneum gustatory recept... 21 7.3
AM292346-1|CAL23158.2| 314|Tribolium castaneum gustatory recept... 21 7.3
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 22.2 bits (45), Expect = 3.2
Identities = 10/34 (29%), Positives = 18/34 (52%)
Frame = +1
Query: 4 VSTVNFVFHKNSTNYSVLIYFKLHFNCIKQKNKL 105
+ V +FH+ T +L +L+ C K+K +L
Sbjct: 1340 IQFVAMLFHRFGTIAHILASTELNLCCTKKKEEL 1373
Score = 20.6 bits (41), Expect = 9.7
Identities = 8/23 (34%), Positives = 12/23 (52%)
Frame = -1
Query: 279 LWLGLLLEQKWVEVVYSDVLCQR 211
+WL LL Q W+ + C+R
Sbjct: 466 IWLLWLLSQTWITLHIWTPKCER 488
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 22.2 bits (45), Expect = 3.2
Identities = 10/34 (29%), Positives = 18/34 (52%)
Frame = +1
Query: 4 VSTVNFVFHKNSTNYSVLIYFKLHFNCIKQKNKL 105
+ V +FH+ T +L +L+ C K+K +L
Sbjct: 1340 IQFVAMLFHRFGTIAHILASTELNLCCTKKKEEL 1373
Score = 20.6 bits (41), Expect = 9.7
Identities = 8/23 (34%), Positives = 12/23 (52%)
Frame = -1
Query: 279 LWLGLLLEQKWVEVVYSDVLCQR 211
+WL LL Q W+ + C+R
Sbjct: 466 IWLLWLLSQTWITLHIWTPKCER 488
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
protein.
Length = 1558
Score = 22.2 bits (45), Expect = 3.2
Identities = 10/34 (29%), Positives = 18/34 (52%)
Frame = +1
Query: 4 VSTVNFVFHKNSTNYSVLIYFKLHFNCIKQKNKL 105
+ V +FH+ T +L +L+ C K+K +L
Sbjct: 1340 IQFVAMLFHRFGTIAHILASTELNLCCTKKKEEL 1373
Score = 20.6 bits (41), Expect = 9.7
Identities = 8/23 (34%), Positives = 12/23 (52%)
Frame = -1
Query: 279 LWLGLLLEQKWVEVVYSDVLCQR 211
+WL LL Q W+ + C+R
Sbjct: 466 IWLLWLLSQTWITLHIWTPKCER 488
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
protein.
Length = 1558
Score = 22.2 bits (45), Expect = 3.2
Identities = 10/34 (29%), Positives = 18/34 (52%)
Frame = +1
Query: 4 VSTVNFVFHKNSTNYSVLIYFKLHFNCIKQKNKL 105
+ V +FH+ T +L +L+ C K+K +L
Sbjct: 1340 IQFVAMLFHRFGTIAHILASTELNLCCTKKKEEL 1373
Score = 20.6 bits (41), Expect = 9.7
Identities = 8/23 (34%), Positives = 12/23 (52%)
Frame = -1
Query: 279 LWLGLLLEQKWVEVVYSDVLCQR 211
+WL LL Q W+ + C+R
Sbjct: 466 IWLLWLLSQTWITLHIWTPKCER 488
>DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulation
protein.
Length = 947
Score = 21.4 bits (43), Expect = 5.6
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +1
Query: 4 VSTVNFVFHKNSTNYSVLI 60
V+T F FHK + YS I
Sbjct: 167 VATGRFTFHKKNLYYSFYI 185
>AM292360-1|CAL23172.2| 427|Tribolium castaneum gustatory receptor
candidate 39 protein.
Length = 427
Score = 21.4 bits (43), Expect = 5.6
Identities = 11/35 (31%), Positives = 14/35 (40%), Gaps = 2/35 (5%)
Frame = -2
Query: 239 WFIATFSVS--ATWIC*QLHLSTFYYRPTNICSGY 141
WFI + A W+C LH + P I Y
Sbjct: 225 WFINCTAKGRVAVWMCNNLHKALESRNPAKILGAY 259
>AM292331-1|CAL23143.2| 437|Tribolium castaneum gustatory receptor
candidate 10 protein.
Length = 437
Score = 21.4 bits (43), Expect = 5.6
Identities = 11/35 (31%), Positives = 14/35 (40%), Gaps = 2/35 (5%)
Frame = -2
Query: 239 WFIATFSVS--ATWIC*QLHLSTFYYRPTNICSGY 141
WFI + A W+C LH + P I Y
Sbjct: 225 WFINCTAKGRVAVWMCNNLHKALESRNPAKILGAY 259
>AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase
protein.
Length = 677
Score = 21.0 bits (42), Expect = 7.3
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = -1
Query: 279 LWLGLLLEQKWVEV 238
+WL LL Q W+ V
Sbjct: 220 IWLVWLLSQAWISV 233
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 21.0 bits (42), Expect = 7.3
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = -1
Query: 279 LWLGLLLEQKWVEV 238
+WL LL Q W+ V
Sbjct: 453 IWLVWLLSQAWISV 466
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 21.0 bits (42), Expect = 7.3
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = -1
Query: 279 LWLGLLLEQKWVEV 238
+WL LL Q W+ V
Sbjct: 453 IWLVWLLSQAWISV 466
>AM292380-1|CAL23192.2| 489|Tribolium castaneum gustatory receptor
candidate 59 protein.
Length = 489
Score = 21.0 bits (42), Expect = 7.3
Identities = 6/10 (60%), Positives = 9/10 (90%)
Frame = -2
Query: 119 LGKFCNLFFC 90
+G FC+L+FC
Sbjct: 251 VGIFCSLYFC 260
>AM292346-1|CAL23158.2| 314|Tribolium castaneum gustatory receptor
candidate 25 protein.
Length = 314
Score = 21.0 bits (42), Expect = 7.3
Identities = 6/10 (60%), Positives = 9/10 (90%)
Frame = -2
Query: 119 LGKFCNLFFC 90
+G FC+L+FC
Sbjct: 76 VGIFCSLYFC 85
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,702
Number of Sequences: 336
Number of extensions: 3092
Number of successful extensions: 16
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13995094
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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