Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc28f04
         (567 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023649-1|AAY85049.1|  108|Drosophila melanogaster IP05301p pro...   159   3e-39
AE014296-926|AAF50797.1|  108|Drosophila melanogaster CG10674-PA...   159   3e-39
M61157-1|AAA28495.1| 1174|Drosophila melanogaster potassium chan...    31   1.4  
AE014298-2086|AAF48410.1| 1174|Drosophila melanogaster CG10952-P...    31   1.4  
AE014298-2085|ABI30980.1| 1270|Drosophila melanogaster CG10952-P...    31   1.4  
AY118323-1|AAM48352.1| 1843|Drosophila melanogaster LD10526p pro...    30   1.9  
AY094652-1|AAM11005.1|   79|Drosophila melanogaster AT11120p pro...    30   1.9  
AE014298-2899|AAF48990.3| 2006|Drosophila melanogaster CG12238-P...    30   1.9  
AE014134-1956|AAN10765.1|   67|Drosophila melanogaster CG31870-P...    30   1.9  
AE014134-1955|AAN10763.1|   79|Drosophila melanogaster CG31870-P...    30   1.9  
AY061473-1|AAL29021.1|  495|Drosophila melanogaster LD44032p pro...    28   7.7  
AE014297-686|AAF54178.1|  495|Drosophila melanogaster CG10435-PA...    28   7.7  

>BT023649-1|AAY85049.1|  108|Drosophila melanogaster IP05301p
           protein.
          Length = 108

 Score =  159 bits (385), Expect = 3e-39
 Identities = 71/108 (65%), Positives = 86/108 (79%), Gaps = 3/108 (2%)
 Frame = +3

Query: 186 MQLSADPRRADRERRYKPPP---PTSAPAEDLTTDYMNILGMVFSMCGLMMRLKWCAWTA 356
           M ++ DPRR ++  RYK P     +    ED+  DYMNILGM+FSMCGLMM+LKWCAW A
Sbjct: 1   MNMTVDPRRKEKINRYKAPKNQGQSGGANEDMMPDYMNILGMIFSMCGLMMKLKWCAWFA 60

Query: 357 VFCSSISFANSRVSDDTKQIVSSFMLSISAVVMSYLQNPAPMTPPWAA 500
           ++CS ISFA+SR SDD KQ++SSFMLS+SAVVMSYLQNPA MTPPWA+
Sbjct: 61  LYCSCISFASSRASDDAKQVLSSFMLSVSAVVMSYLQNPAAMTPPWAS 108


>AE014296-926|AAF50797.1|  108|Drosophila melanogaster CG10674-PA
           protein.
          Length = 108

 Score =  159 bits (385), Expect = 3e-39
 Identities = 71/108 (65%), Positives = 86/108 (79%), Gaps = 3/108 (2%)
 Frame = +3

Query: 186 MQLSADPRRADRERRYKPPP---PTSAPAEDLTTDYMNILGMVFSMCGLMMRLKWCAWTA 356
           M ++ DPRR ++  RYK P     +    ED+  DYMNILGM+FSMCGLMM+LKWCAW A
Sbjct: 1   MNMTVDPRRKEKINRYKAPKNQGQSGGANEDMMPDYMNILGMIFSMCGLMMKLKWCAWFA 60

Query: 357 VFCSSISFANSRVSDDTKQIVSSFMLSISAVVMSYLQNPAPMTPPWAA 500
           ++CS ISFA+SR SDD KQ++SSFMLS+SAVVMSYLQNPA MTPPWA+
Sbjct: 61  LYCSCISFASSRASDDAKQVLSSFMLSVSAVVMSYLQNPAAMTPPWAS 108


>M61157-1|AAA28495.1| 1174|Drosophila melanogaster potassium channel
           protein protein.
          Length = 1174

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = +3

Query: 393 VSDDTKQIVSSFMLSISAVVMSYLQNPAPMTPP 491
           + D TKQ   + M+S+SA +M   +  AP TPP
Sbjct: 194 LKDPTKQSNLAHMMSLSADIMPQYRQEAPKTPP 226


>AE014298-2086|AAF48410.1| 1174|Drosophila melanogaster CG10952-PA,
           isoform A protein.
          Length = 1174

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = +3

Query: 393 VSDDTKQIVSSFMLSISAVVMSYLQNPAPMTPP 491
           + D TKQ   + M+S+SA +M   +  AP TPP
Sbjct: 194 LKDPTKQSNLAHMMSLSADIMPQYRQEAPKTPP 226


>AE014298-2085|ABI30980.1| 1270|Drosophila melanogaster CG10952-PB,
           isoform B protein.
          Length = 1270

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = +3

Query: 393 VSDDTKQIVSSFMLSISAVVMSYLQNPAPMTPP 491
           + D TKQ   + M+S+SA +M   +  AP TPP
Sbjct: 194 LKDPTKQSNLAHMMSLSADIMPQYRQEAPKTPP 226


>AY118323-1|AAM48352.1| 1843|Drosophila melanogaster LD10526p
           protein.
          Length = 1843

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
 Frame = +3

Query: 93  EEQITKLTQIYSLIRRVTATNICGPIIKSGKMQLSADPRRADRERRYKPPP-PTSAP 260
           +EQ  KL Q    + ++T  N+C P  K   +     P  A +    KP P PT AP
Sbjct: 262 DEQAAKLEQQLQPLPKLTIKNLCSPKHKVRAVLEEKPPTAASKLAIPKPTPNPTPAP 318


>AY094652-1|AAM11005.1|   79|Drosophila melanogaster AT11120p
           protein.
          Length = 79

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 17/36 (47%), Positives = 19/36 (52%)
 Frame = +3

Query: 207 RRADRERRYKPPPPTSAPAEDLTTDYMNILGMVFSM 314
           RR DR+R  KP P  +A   D  T Y N  G  FSM
Sbjct: 29  RRIDRKRDEKPGPGPAAYKVDKVTRYGNAEGPQFSM 64


>AE014298-2899|AAF48990.3| 2006|Drosophila melanogaster CG12238-PA
           protein.
          Length = 2006

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
 Frame = +3

Query: 93  EEQITKLTQIYSLIRRVTATNICGPIIKSGKMQLSADPRRADRERRYKPPP-PTSAP 260
           +EQ  KL Q    + ++T  N+C P  K   +     P  A +    KP P PT AP
Sbjct: 425 DEQAAKLEQQLQPLPKLTIKNLCSPKHKVRAVLEEKPPTAASKLAIPKPTPNPTPAP 481


>AE014134-1956|AAN10765.1|   67|Drosophila melanogaster CG31870-PC,
           isoform C protein.
          Length = 67

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 17/36 (47%), Positives = 19/36 (52%)
 Frame = +3

Query: 207 RRADRERRYKPPPPTSAPAEDLTTDYMNILGMVFSM 314
           RR DR+R  KP P  +A   D  T Y N  G  FSM
Sbjct: 17  RRIDRKRDEKPGPGPAAYKVDKVTRYGNAEGPQFSM 52


>AE014134-1955|AAN10763.1|   79|Drosophila melanogaster CG31870-PA,
           isoform A protein.
          Length = 79

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 17/36 (47%), Positives = 19/36 (52%)
 Frame = +3

Query: 207 RRADRERRYKPPPPTSAPAEDLTTDYMNILGMVFSM 314
           RR DR+R  KP P  +A   D  T Y N  G  FSM
Sbjct: 29  RRIDRKRDEKPGPGPAAYKVDKVTRYGNAEGPQFSM 64


>AY061473-1|AAL29021.1|  495|Drosophila melanogaster LD44032p
           protein.
          Length = 495

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = +3

Query: 201 DPRRADRERRYKPPPPTSAPAED 269
           +P + D E++ +PPPP +A + D
Sbjct: 118 EPEQRDEEQQQQPPPPITAESRD 140


>AE014297-686|AAF54178.1|  495|Drosophila melanogaster CG10435-PA
           protein.
          Length = 495

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = +3

Query: 201 DPRRADRERRYKPPPPTSAPAED 269
           +P + D E++ +PPPP +A + D
Sbjct: 118 EPEQRDEEQQQQPPPPITAESRD 140


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,233,795
Number of Sequences: 53049
Number of extensions: 494553
Number of successful extensions: 1678
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1579
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1676
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2213979693
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)