Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc28f01
(704 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF017415-1|AAB70262.1| 343|Tribolium castaneum abdominal-AII pr... 24 1.0
AF017414-1|AAB70260.1| 209|Tribolium castaneum abdominal-AII pr... 24 1.0
AF017415-2|AAB70263.1| 284|Tribolium castaneum abdominal-A prot... 23 1.8
AF017414-2|AAB70261.1| 150|Tribolium castaneum abdominal-A prot... 23 1.8
AY695257-1|AAW21974.1| 224|Tribolium castaneum intermediate neu... 23 2.4
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad... 21 7.4
EF222299-1|ABN79659.1| 136|Tribolium castaneum ion transport pe... 21 9.8
EF222298-1|ABN79658.1| 120|Tribolium castaneum ion transport pe... 21 9.8
EF222297-1|ABN79657.1| 140|Tribolium castaneum ion transport pe... 21 9.8
AM292381-1|CAL23193.2| 364|Tribolium castaneum gustatory recept... 21 9.8
>AF017415-1|AAB70262.1| 343|Tribolium castaneum abdominal-AII
protein.
Length = 343
Score = 24.2 bits (50), Expect = 1.0
Identities = 9/38 (23%), Positives = 20/38 (52%)
Frame = +3
Query: 513 KLWIYMAKLHHHHLCNQSSYQSTLRGTHQS*LASTVRS 626
+++ Y++ HHHH +++ + G+ +ST S
Sbjct: 59 RMYPYVSAAHHHHQAAAAAFGAAASGSMVPSFSSTASS 96
>AF017414-1|AAB70260.1| 209|Tribolium castaneum abdominal-AII
protein.
Length = 209
Score = 24.2 bits (50), Expect = 1.0
Identities = 9/38 (23%), Positives = 20/38 (52%)
Frame = +3
Query: 513 KLWIYMAKLHHHHLCNQSSYQSTLRGTHQS*LASTVRS 626
+++ Y++ HHHH +++ + G+ +ST S
Sbjct: 59 RMYPYVSAAHHHHQAAAAAFGAAASGSMVPSFSSTASS 96
>AF017415-2|AAB70263.1| 284|Tribolium castaneum abdominal-A
protein.
Length = 284
Score = 23.4 bits (48), Expect = 1.8
Identities = 9/37 (24%), Positives = 19/37 (51%)
Frame = +3
Query: 516 LWIYMAKLHHHHLCNQSSYQSTLRGTHQS*LASTVRS 626
++ Y++ HHHH +++ + G+ +ST S
Sbjct: 1 MYPYVSAAHHHHQAAAAAFGAAASGSMVPSFSSTASS 37
>AF017414-2|AAB70261.1| 150|Tribolium castaneum abdominal-A
protein.
Length = 150
Score = 23.4 bits (48), Expect = 1.8
Identities = 9/37 (24%), Positives = 19/37 (51%)
Frame = +3
Query: 516 LWIYMAKLHHHHLCNQSSYQSTLRGTHQS*LASTVRS 626
++ Y++ HHHH +++ + G+ +ST S
Sbjct: 1 MYPYVSAAHHHHQAAAAAFGAAASGSMVPSFSSTASS 37
>AY695257-1|AAW21974.1| 224|Tribolium castaneum intermediate
neuroblasts defectiveprotein protein.
Length = 224
Score = 23.0 bits (47), Expect = 2.4
Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 3/22 (13%)
Frame = +2
Query: 191 PVRQCAVPPKR---TPKTLMPI 247
P+R A+PPKR +PK PI
Sbjct: 65 PIRPVALPPKREIPSPKRSSPI 86
>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
adhesion molecule splicevariant 3.12.3.1 protein.
Length = 1639
Score = 21.4 bits (43), Expect = 7.4
Identities = 8/28 (28%), Positives = 16/28 (57%)
Frame = -1
Query: 662 PLFQLNLTILV*TPYSTCQLTLVCPSEG 579
P F ++ +L +S + L+CP++G
Sbjct: 231 PAFSTDIKVLGYQRHSKQNVALLCPAQG 258
>EF222299-1|ABN79659.1| 136|Tribolium castaneum ion transport
peptide isoform C protein.
Length = 136
Score = 21.0 bits (42), Expect = 9.8
Identities = 7/32 (21%), Positives = 16/32 (50%)
Frame = +3
Query: 546 HHLCNQSSYQSTLRGTHQS*LASTVRSLHQDC 641
HH +S + +G + + + + S+ +DC
Sbjct: 41 HHFTKRSFFDIQCKGVYDKSIFAKLDSICEDC 72
>EF222298-1|ABN79658.1| 120|Tribolium castaneum ion transport
peptide isoform B protein.
Length = 120
Score = 21.0 bits (42), Expect = 9.8
Identities = 7/32 (21%), Positives = 16/32 (50%)
Frame = +3
Query: 546 HHLCNQSSYQSTLRGTHQS*LASTVRSLHQDC 641
HH +S + +G + + + + S+ +DC
Sbjct: 41 HHFTKRSFFDIQCKGVYDKSIFAKLDSICEDC 72
>EF222297-1|ABN79657.1| 140|Tribolium castaneum ion transport
peptide isoform A protein.
Length = 140
Score = 21.0 bits (42), Expect = 9.8
Identities = 7/32 (21%), Positives = 16/32 (50%)
Frame = +3
Query: 546 HHLCNQSSYQSTLRGTHQS*LASTVRSLHQDC 641
HH +S + +G + + + + S+ +DC
Sbjct: 41 HHFTKRSFFDIQCKGVYDKSIFAKLDSICEDC 72
>AM292381-1|CAL23193.2| 364|Tribolium castaneum gustatory receptor
candidate 60 protein.
Length = 364
Score = 21.0 bits (42), Expect = 9.8
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = -3
Query: 270 VAAIDFHVIGISVFGVLLG 214
V +D HV ++F LLG
Sbjct: 113 VVTVDLHVFFFTLFNKLLG 131
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,834
Number of Sequences: 336
Number of extensions: 3688
Number of successful extensions: 16
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18634795
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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