Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc28f01
         (704 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY089369-1|AAL90107.1|  251|Drosophila melanogaster AT19154p pro...   225   3e-59
AE014134-822|AAF52184.1|  251|Drosophila melanogaster CG8885-PA ...   225   3e-59
BT022130-1|AAY51525.1|  530|Drosophila melanogaster IP08855p pro...    29   8.1  
AY113342-1|AAM29347.1|  347|Drosophila melanogaster GH12583p pro...    29   8.1  
AE014296-1982|AAF50042.1|  530|Drosophila melanogaster CG7368-PB...    29   8.1  
AE014296-1162|AAF50636.2|  347|Drosophila melanogaster CG14821-P...    29   8.1  

>AY089369-1|AAL90107.1|  251|Drosophila melanogaster AT19154p
           protein.
          Length = 251

 Score =  225 bits (551), Expect = 3e-59
 Identities = 106/190 (55%), Positives = 138/190 (72%)
 Frame = +2

Query: 134 MNSMLRNRVSFVFRALSTTPVRQCAVPPKRTPKTLMPITWKSMAATVVVGGGLTAFMMYV 313
           M+  L+  V    R      +R  A P   T K   PI+W+S+A    +G G   FM+YV
Sbjct: 1   MSRSLQRLVGSCRRWAQQPAIRHYAAPADST-KGKGPISWRSLAVIGALGAGGVGFMLYV 59

Query: 314 KKEKQEALDRERKKQLGKAKIGGSFELVNSEGKLVKSADFLGKWMLIYFGFTHCPDICPD 493
           K EK EA  +ER++QLGKA IGGS+ELV+S+G + KS DFLGKW+LIYFGFTHCPDICPD
Sbjct: 60  KSEKDEARMKERQRQLGKAAIGGSWELVDSQGAVRKSEDFLGKWLLIYFGFTHCPDICPD 119

Query: 494 ELEKLAEVVDLHGKTPSSPPLQPVFISVDPQRDTPELVGKYCKEFTPRLLGLTGTKEQVQ 673
           ELEK+A VVD   K+P +P +QP+FI+VDP+RD+ E+V KY KEF+P+LLGLTGT EQ++
Sbjct: 120 ELEKMAAVVDEVEKSPQTPAVQPIFITVDPERDSKEVVAKYVKEFSPKLLGLTGTVEQIR 179

Query: 674 QACKSYXVYF 703
           + CK++ VYF
Sbjct: 180 KVCKAFRVYF 189


>AE014134-822|AAF52184.1|  251|Drosophila melanogaster CG8885-PA
           protein.
          Length = 251

 Score =  225 bits (551), Expect = 3e-59
 Identities = 106/190 (55%), Positives = 138/190 (72%)
 Frame = +2

Query: 134 MNSMLRNRVSFVFRALSTTPVRQCAVPPKRTPKTLMPITWKSMAATVVVGGGLTAFMMYV 313
           M+  L+  V    R      +R  A P   T K   PI+W+S+A    +G G   FM+YV
Sbjct: 1   MSRSLQRLVGSCRRWAQQPAIRHYAAPADST-KGKGPISWRSLAVIGALGAGGVGFMLYV 59

Query: 314 KKEKQEALDRERKKQLGKAKIGGSFELVNSEGKLVKSADFLGKWMLIYFGFTHCPDICPD 493
           K EK EA  +ER++QLGKA IGGS+ELV+S+G + KS DFLGKW+LIYFGFTHCPDICPD
Sbjct: 60  KSEKDEARMKERQRQLGKAAIGGSWELVDSQGAVRKSEDFLGKWLLIYFGFTHCPDICPD 119

Query: 494 ELEKLAEVVDLHGKTPSSPPLQPVFISVDPQRDTPELVGKYCKEFTPRLLGLTGTKEQVQ 673
           ELEK+A VVD   K+P +P +QP+FI+VDP+RD+ E+V KY KEF+P+LLGLTGT EQ++
Sbjct: 120 ELEKMAAVVDEVEKSPQTPAVQPIFITVDPERDSKEVVAKYVKEFSPKLLGLTGTVEQIR 179

Query: 674 QACKSYXVYF 703
           + CK++ VYF
Sbjct: 180 KVCKAFRVYF 189


>BT022130-1|AAY51525.1|  530|Drosophila melanogaster IP08855p
           protein.
          Length = 530

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 15/54 (27%), Positives = 27/54 (50%)
 Frame = +2

Query: 230 KTLMPITWKSMAATVVVGGGLTAFMMYVKKEKQEALDRERKKQLGKAKIGGSFE 391
           +T   +T  +  AT    GG  A     KK K+ + DR+ K + G+ ++G + +
Sbjct: 270 QTQAAVTATATTATATTAGGSGATSGKKKKRKKRSKDRKTKLRPGEIRLGTALD 323


>AY113342-1|AAM29347.1|  347|Drosophila melanogaster GH12583p
           protein.
          Length = 347

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = +2

Query: 173 RALSTTPVRQCAVPPKRTPKTLMPITWKSMAATV 274
           R+L TTP+RQ  VP K+ P+    +   S A+ V
Sbjct: 49  RSLQTTPIRQVQVPLKQPPRGAGLLIQPSSASAV 82


>AE014296-1982|AAF50042.1|  530|Drosophila melanogaster CG7368-PB
           protein.
          Length = 530

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 15/54 (27%), Positives = 27/54 (50%)
 Frame = +2

Query: 230 KTLMPITWKSMAATVVVGGGLTAFMMYVKKEKQEALDRERKKQLGKAKIGGSFE 391
           +T   +T  +  AT    GG  A     KK K+ + DR+ K + G+ ++G + +
Sbjct: 270 QTQAAVTATATTATATTAGGSGATSGKKKKRKKRSKDRKTKLRPGEIRLGTALD 323


>AE014296-1162|AAF50636.2|  347|Drosophila melanogaster CG14821-PA
           protein.
          Length = 347

 Score = 28.7 bits (61), Expect = 8.1
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = +2

Query: 173 RALSTTPVRQCAVPPKRTPKTLMPITWKSMAATV 274
           R+L TTP+RQ  VP K+ P+    +   S A+ V
Sbjct: 49  RSLQTTPIRQVQVPLKQPPRGAGLLIQPSSASAV 82


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,890,559
Number of Sequences: 53049
Number of extensions: 660304
Number of successful extensions: 1997
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1881
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1995
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3108380451
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)