Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc28f01
(704 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58761-6|AAB00716.1| 312|Caenorhabditis elegans Hypothetical pr... 166 1e-41
Z32683-2|CAA83619.1| 226|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z78015-4|CAB01436.2| 149|Caenorhabditis elegans Hypothetical pr... 29 2.4
U61958-3|AAB03180.2| 149|Caenorhabditis elegans Hypothetical pr... 29 2.4
AF098987-4|AAC67429.1| 496|Caenorhabditis elegans Hypothetical ... 29 2.4
U40802-5|AAK19011.2| 339|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z81526-5|CAB04262.1| 983|Caenorhabditis elegans Hypothetical pr... 28 5.7
U53153-7|AAC69037.1| 1280|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z82282-5|CAB05270.1| 555|Caenorhabditis elegans Hypothetical pr... 28 7.5
U80848-1|AAB37990.3| 389|Caenorhabditis elegans Hypothetical pr... 27 9.9
>U58761-6|AAB00716.1| 312|Caenorhabditis elegans Hypothetical
protein C01F1.2 protein.
Length = 312
Score = 166 bits (404), Expect = 1e-41
Identities = 71/150 (47%), Positives = 105/150 (70%)
Frame = +2
Query: 251 WKSMAATVVVGGGLTAFMMYVKKEKQEALDRERKKQLGKAKIGGSFELVNSEGKLVKSAD 430
WK++ T VGG A + Y+KK + + ++ RK+ GKA+IGG +EL+N++GK+ S +
Sbjct: 96 WKTVLGTFAVGGTCLAALFYIKKIRLDEREKHRKQTAGKARIGGEWELMNTDGKMEGSQE 155
Query: 431 FLGKWMLIYFGFTHCPDICPDELEKLAEVVDLHGKTPSSPPLQPVFISVDPQRDTPELVG 610
G W+L+YFGFT+CPDICPDE+EK+ +VV++ + P+ PVFISVDP+RD+ V
Sbjct: 156 LRGNWLLMYFGFTNCPDICPDEIEKMVKVVEIIEAKKDATPIVPVFISVDPERDSVARVK 215
Query: 611 KYCKEFTPRLLGLTGTKEQVQQACKSYXVY 700
+YC EF+ +L G TGT EQV + K++ VY
Sbjct: 216 EYCSEFSNKLRGFTGTTEQVNKVAKTFRVY 245
>Z32683-2|CAA83619.1| 226|Caenorhabditis elegans Hypothetical
protein R07E5.2 protein.
Length = 226
Score = 30.3 bits (65), Expect = 1.4
Identities = 10/36 (27%), Positives = 22/36 (61%)
Frame = +2
Query: 392 LVNSEGKLVKSADFLGKWMLIYFGFTHCPDICPDEL 499
+V+ + K++ D+ GKW++++F +CP E+
Sbjct: 47 VVDGDFKVISDQDYKGKWLVMFFYPLDFTFVCPTEI 82
>Z78015-4|CAB01436.2| 149|Caenorhabditis elegans Hypothetical
protein R02D5.7 protein.
Length = 149
Score = 29.5 bits (63), Expect = 2.4
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +2
Query: 461 GFTHCPDICPDELEKLAEVVD 523
G+ +C D+ PD+L+K+AE D
Sbjct: 126 GYENCQDMTPDQLKKIAEQAD 146
>U61958-3|AAB03180.2| 149|Caenorhabditis elegans Hypothetical
protein C25A8.2 protein.
Length = 149
Score = 29.5 bits (63), Expect = 2.4
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +2
Query: 461 GFTHCPDICPDELEKLAEVVD 523
G+ +C D+ PD+L+K+AE D
Sbjct: 126 GYENCQDMTPDQLKKIAEQAD 146
>AF098987-4|AAC67429.1| 496|Caenorhabditis elegans Hypothetical
protein F40H3.1a protein.
Length = 496
Score = 29.5 bits (63), Expect = 2.4
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Frame = -3
Query: 402 EFTSSKLPPIFAFPSCFFL-SRSSASCFSFL---TYIIKAVKPPPTTTVAA 262
E T +LP + F +C F+ S+SSA C + L TYI PP + T +A
Sbjct: 165 ESTPKELPTVTKFTNCTFIRSQSSARCKAILPDTTYI--CTLPPVSATFSA 213
>U40802-5|AAK19011.2| 339|Caenorhabditis elegans Hypothetical
protein ZC477.5 protein.
Length = 339
Score = 28.7 bits (61), Expect = 4.3
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +2
Query: 449 LIYFGFTHCPDICPDELEKLAEVVDLHGKTPSSPPLQPV 565
L+ +G +CP + + L+K V + H PP QP+
Sbjct: 280 LLAYGRQNCPGVIEEILKKPVHVPNDHSTQQPQPPEQPI 318
>Z81526-5|CAB04262.1| 983|Caenorhabditis elegans Hypothetical
protein F33H2.1 protein.
Length = 983
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = -3
Query: 579 STDMKTGCKGGDDGVLPCKSTTSANFSNS 493
ST+ KT +GG DGV C + +SAN S
Sbjct: 477 STEAKTPARGGQDGVKTC-TISSANLFTS 504
>U53153-7|AAC69037.1| 1280|Caenorhabditis elegans Hypothetical protein
T19A5.1 protein.
Length = 1280
Score = 28.3 bits (60), Expect = 5.7
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +2
Query: 500 EKLAEVVDLHGKTPSSPPLQPVFISVDPQRDTPEL 604
E + + VDL G P+ LQP+ ++D +++P L
Sbjct: 1063 EDIEKYVDLRGPMPAMASLQPICPNMDKYKNSPLL 1097
>Z82282-5|CAB05270.1| 555|Caenorhabditis elegans Hypothetical
protein T07G12.5 protein.
Length = 555
Score = 27.9 bits (59), Expect = 7.5
Identities = 22/82 (26%), Positives = 37/82 (45%), Gaps = 3/82 (3%)
Frame = -3
Query: 360 SCFFLSRSSASCFSFLTYIIKAVKPPPTTTVAAIDFHVIG---ISVFGVLLGGTAHCRTG 190
SCF S ++ I K +PPP+ T A IG +++GV G T +
Sbjct: 285 SCFAAMIESIGDYNLCAKISKQSRPPPSNTNRAFVVEGIGCILAALWGVGTGVTTYAENI 344
Query: 189 VVLNARNTKLTRFRSMEFILLF 124
+++ TK+T +M+ +F
Sbjct: 345 AIMSV--TKVTSRITMQMAGVF 364
>U80848-1|AAB37990.3| 389|Caenorhabditis elegans Hypothetical
protein T10H10.3 protein.
Length = 389
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = -3
Query: 402 EFTSSKLPPIFAFPSCFFLSRSSASCFSFLTYIIKAVKPPPTTT 271
++ + PP + +SR+ S + T I+ +V PPPT+T
Sbjct: 18 KYVKRESPPTVPSLAATAVSRTRRSPIAASTLILSSVPPPPTST 61
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,009,123
Number of Sequences: 27780
Number of extensions: 343315
Number of successful extensions: 1107
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1053
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1107
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1634564590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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