Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc28e22
         (612 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    23   2.7  
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    22   3.5  
DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory pro...    22   4.7  
DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory pro...    22   4.7  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    21   6.2  

>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -3

Query: 412 VQKINRQPVVVQVKQSFN 359
           V K+N+QP V+Q K + +
Sbjct: 225 VMKVNKQPKVIQGKSALS 242


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 9/26 (34%), Positives = 17/26 (65%)
 Frame = -3

Query: 241 FRLHQLNIITKSFQHYL*RVGHATNV 164
           +RL+QL+++  +   Y+  V  ATN+
Sbjct: 149 YRLYQLSVLIDNNMSYIIIVSFATNL 174


>DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory
           protein 16 protein.
          Length = 126

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +2

Query: 323 YKSDYDAIKNKNIKTLFDLYNDRLPINFLD 412
           Y S  + +  +NI     L NDRL  N+LD
Sbjct: 16  YVSSQEYLVPQNIDVDEILKNDRLTRNYLD 45


>DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory
           protein 9 protein.
          Length = 126

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +2

Query: 323 YKSDYDAIKNKNIKTLFDLYNDRLPINFLD 412
           Y S  + +  +NI     L NDRL  N+LD
Sbjct: 16  YVSSQEYLVPQNIDVDEILKNDRLTRNYLD 45


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = +3

Query: 447 PARDLRKTICCRLAATNVPIDPKLV*Y 527
           P+RDL  T+C +      P D  +  Y
Sbjct: 413 PSRDLTTTLCTKAGYVRDPDDCSIFYY 439


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,256
Number of Sequences: 336
Number of extensions: 2423
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15561709
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)