Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc28e22
         (612 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X90761-1|CAA62284.1|  448|Homo sapiens HHa2 hair keratin type I ...    30   5.6  
X81419-1|CAA57179.1|  405|Homo sapiens hair type I acidic kerati...    30   5.6  
BC013144-1|AAH13144.1|  797|Homo sapiens transient receptor pote...    30   7.4  
BC008836-1|AAH08836.2|  263|Homo sapiens TRPC4AP protein protein.      30   7.4  
BC001323-1|AAH01323.1|  312|Homo sapiens TRPC4AP protein protein.      30   7.4  
AL132825-7|CAC14946.1|  797|Homo sapiens transient receptor pote...    30   7.4  
AL450426-6|CAH72414.1|  318|Homo sapiens olfactory receptor, fam...    29   9.8  
AB065710-1|BAC05932.1|  318|Homo sapiens seven transmembrane hel...    29   9.8  

>X90761-1|CAA62284.1|  448|Homo sapiens HHa2 hair keratin type I
           intermediate filament protein.
          Length = 448

 Score = 30.3 bits (65), Expect = 5.6
 Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
 Frame = +2

Query: 104 LNQEDCVMLKNLSNLASKFFNVRCVADTLEVMLEA---LRNNIELVQPESDA 250
           LNQ+     + L N  S   ++R   +TLE+ L+A   LR+++E    ES+A
Sbjct: 294 LNQQVATSSEQLQNYQSDIIDLRRTVNTLEIELQAQHSLRDSLENTLTESEA 345


>X81419-1|CAA57179.1|  405|Homo sapiens hair type I acidic keratin
           protein.
          Length = 405

 Score = 30.3 bits (65), Expect = 5.6
 Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
 Frame = +2

Query: 104 LNQEDCVMLKNLSNLASKFFNVRCVADTLEVMLEA---LRNNIELVQPESDA 250
           LNQ+     + L N  S   ++R   +TLE+ L+A   LR+++E    ES+A
Sbjct: 251 LNQQVATSSEQLQNYQSDIIDLRRTVNTLEIELQAQHSLRDSLENTLTESEA 302


>BC013144-1|AAH13144.1|  797|Homo sapiens transient receptor
           potential cation channel, subfamily C, member 4
           associated p protein.
          Length = 797

 Score = 29.9 bits (64), Expect = 7.4
 Identities = 19/53 (35%), Positives = 29/53 (54%)
 Frame = +2

Query: 35  IDQLKKFRDYLNSDADAGEFQIFLNQEDCVMLKNLSNLASKFFNVRCVADTLE 193
           +D  K+F  Y+N+DA   +FQ+FL Q +       S+L      VRCV  +L+
Sbjct: 594 VDAFKRFNKYINTDA---KFQVFLKQIN-------SSLVDSNMLVRCVTLSLD 636


>BC008836-1|AAH08836.2|  263|Homo sapiens TRPC4AP protein protein.
          Length = 263

 Score = 29.9 bits (64), Expect = 7.4
 Identities = 19/53 (35%), Positives = 29/53 (54%)
 Frame = +2

Query: 35  IDQLKKFRDYLNSDADAGEFQIFLNQEDCVMLKNLSNLASKFFNVRCVADTLE 193
           +D  K+F  Y+N+DA   +FQ+FL Q +       S+L      VRCV  +L+
Sbjct: 60  VDAFKRFNKYINTDA---KFQVFLKQIN-------SSLVDSNMLVRCVTLSLD 102


>BC001323-1|AAH01323.1|  312|Homo sapiens TRPC4AP protein protein.
          Length = 312

 Score = 29.9 bits (64), Expect = 7.4
 Identities = 19/53 (35%), Positives = 29/53 (54%)
 Frame = +2

Query: 35  IDQLKKFRDYLNSDADAGEFQIFLNQEDCVMLKNLSNLASKFFNVRCVADTLE 193
           +D  K+F  Y+N+DA   +FQ+FL Q +       S+L      VRCV  +L+
Sbjct: 109 VDAFKRFNKYINTDA---KFQVFLKQIN-------SSLVDSNMLVRCVTLSLD 151


>AL132825-7|CAC14946.1|  797|Homo sapiens transient receptor
           potential cation channel, subfamily C, member 4
           associated p protein.
          Length = 797

 Score = 29.9 bits (64), Expect = 7.4
 Identities = 19/53 (35%), Positives = 29/53 (54%)
 Frame = +2

Query: 35  IDQLKKFRDYLNSDADAGEFQIFLNQEDCVMLKNLSNLASKFFNVRCVADTLE 193
           +D  K+F  Y+N+DA   +FQ+FL Q +       S+L      VRCV  +L+
Sbjct: 594 VDAFKRFNKYINTDA---KFQVFLKQIN-------SSLVDSNMLVRCVTLSLD 636


>AL450426-6|CAH72414.1|  318|Homo sapiens olfactory receptor, family
           13, subfamily C, member 5 protein.
          Length = 318

 Score = 29.5 bits (63), Expect = 9.8
 Identities = 18/56 (32%), Positives = 29/56 (51%)
 Frame = -1

Query: 351 FFMAS*SLLYMAMLYSGVVESLISCVIFMTIRRTASLSGCTNSILLRRASNITSNV 184
           FF+ + S L +    + +  +L+S   F++ R+T SLSGC   + L  A   T  V
Sbjct: 61  FFLGNLSFLDICYTTTSIPSTLVS---FLSERKTISLSGCAVQMFLSLAMGTTECV 113


>AB065710-1|BAC05932.1|  318|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 318

 Score = 29.5 bits (63), Expect = 9.8
 Identities = 18/56 (32%), Positives = 29/56 (51%)
 Frame = -1

Query: 351 FFMAS*SLLYMAMLYSGVVESLISCVIFMTIRRTASLSGCTNSILLRRASNITSNV 184
           FF+ + S L +    + +  +L+S   F++ R+T SLSGC   + L  A   T  V
Sbjct: 61  FFLGNLSFLDICYTTTSIPSTLVS---FLSERKTISLSGCAVQMFLSLAMGTTECV 113


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,636,579
Number of Sequences: 237096
Number of extensions: 1295371
Number of successful extensions: 2989
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2853
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2989
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6522878360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)