Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc28e19
(717 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q06692 Cluster: UPF0213 protein in VLF1-GP41 intergenic... 189 7e-47
UniRef50_Q06693 Cluster: Uncharacterized 12.5 kDa protein in VLF... 141 1e-32
UniRef50_Q06VJ4 Cluster: Putative uncharacterized protein; n=1; ... 100 3e-20
UniRef50_P32651 Cluster: Structural glycoprotein gp41; n=34; Nuc... 94 4e-18
UniRef50_Q8JMD7 Cluster: Putative uncharacterized protein; n=2; ... 83 7e-15
UniRef50_Q80LJ7 Cluster: Putative uncharacterized protein; n=1; ... 79 1e-13
UniRef50_Q0E564 Cluster: 13 kDa GIY-YIG-like endonuclease; n=1; ... 73 5e-12
UniRef50_Q91FT0 Cluster: 242L; n=1; Invertebrate iridescent viru... 69 1e-10
UniRef50_Q6D994 Cluster: UPF0213 protein ECA0725; n=6; Enterobac... 64 2e-09
UniRef50_Q9PYW8 Cluster: ORF75; n=1; Xestia c-nigrum granuloviru... 61 2e-08
UniRef50_Q2SQ04 Cluster: Predicted endonuclease containing a URI... 59 1e-07
UniRef50_P67349 Cluster: UPF0213 protein yhbQ; n=22; Enterobacte... 58 2e-07
UniRef50_Q1JZM0 Cluster: Excinuclease ABC, C subunit-like; n=2; ... 58 2e-07
UniRef50_A0KPI3 Cluster: Endo/excinuclease domain protein; n=2; ... 58 3e-07
UniRef50_A0EYZ1 Cluster: Endonuclease; n=1; Ecotropis obliqua NP... 56 7e-07
UniRef50_Q9KLK4 Cluster: UPF0213 protein VC_A0739; n=29; Gammapr... 56 9e-07
UniRef50_A7HV75 Cluster: Excinuclease ABC C subunit domain prote... 55 2e-06
UniRef50_A4CD43 Cluster: Putative uncharacterized protein; n=1; ... 55 2e-06
UniRef50_A0YDW5 Cluster: Putative uncharacterized protein; n=1; ... 55 2e-06
UniRef50_Q725W6 Cluster: UPF0213 protein DVU_3309; n=2; Desulfov... 55 2e-06
UniRef50_Q87GU3 Cluster: UPF0213 protein VPA1222; n=11; Vibriona... 54 5e-06
UniRef50_Q6AJN1 Cluster: UPF0213 protein DP2720; n=3; cellular o... 54 5e-06
UniRef50_A6F7V2 Cluster: Excinuclease ABC, C subunit, N-terminal... 53 6e-06
UniRef50_Q6LJI0 Cluster: Putative uncharacterized protein C3908;... 53 8e-06
UniRef50_A3Y6M7 Cluster: Putative uncharacterized protein; n=1; ... 52 1e-05
UniRef50_Q2C4T8 Cluster: Putative uncharacterized protein; n=2; ... 52 1e-05
UniRef50_Q3IE32 Cluster: Putative uncharacterized protein; n=2; ... 50 4e-05
UniRef50_Q0F3H4 Cluster: Putative uncharacterized protein; n=1; ... 50 6e-05
UniRef50_Q089V4 Cluster: Excinuclease ABC, C subunit domain prot... 50 6e-05
UniRef50_A6VVA2 Cluster: Excinuclease ABC C subunit domain prote... 49 1e-04
UniRef50_Q1PZH5 Cluster: Putative uncharacterized protein; n=1; ... 49 1e-04
UniRef50_Q9HXF2 Cluster: UPF0213 protein PA3854; n=15; Pseudomon... 48 2e-04
UniRef50_Q0I0G8 Cluster: Excinuclease ABC, C subunit domain prot... 48 2e-04
UniRef50_Q0IL29 Cluster: ORF90; n=1; Leucania separata nuclear p... 48 3e-04
UniRef50_Q21GK3 Cluster: Excinuclease ABC, C subunit-like protei... 48 3e-04
UniRef50_A4LZS0 Cluster: Excinuclease ABC, C subunit domain prot... 48 3e-04
UniRef50_UPI0000E87E36 Cluster: hypothetical protein MB2181_0086... 47 4e-04
UniRef50_Q2ILJ9 Cluster: Excinuclease ABC, C subunit-like; n=2; ... 47 4e-04
UniRef50_A1S1V1 Cluster: Endonuclease containing a URI domain; n... 47 4e-04
UniRef50_Q9KGL3 Cluster: UPF0213 protein BH0048; n=11; Bacteria|... 47 4e-04
UniRef50_Q0HNZ9 Cluster: Excinuclease ABC, C subunit domain prot... 47 5e-04
UniRef50_A4B511 Cluster: Hypothetical URI domain endonuclease; n... 47 5e-04
UniRef50_Q8V5S5 Cluster: ORF74; n=3; Nucleopolyhedrovirus|Rep: O... 46 7e-04
UniRef50_Q0N429 Cluster: Ac78-like protein; n=1; Clanis bilineat... 46 7e-04
UniRef50_A0EYW5 Cluster: Putative uncharacterized protein; n=1; ... 46 7e-04
UniRef50_UPI0000E0E642 Cluster: hypothetical protein OM2255_2012... 46 0.001
UniRef50_Q91BF0 Cluster: Putative uncharacterized protein; n=1; ... 46 0.001
UniRef50_Q5QZJ7 Cluster: Predicted endonuclease containing a URI... 46 0.001
UniRef50_A6BH73 Cluster: Putative uncharacterized protein; n=1; ... 46 0.001
UniRef50_Q62LB3 Cluster: Endo/excinuclease domain protein; n=20;... 45 0.002
UniRef50_A4B9D9 Cluster: Excinuclease ABC, C subunit-like protei... 45 0.002
UniRef50_A1FNL2 Cluster: Excinuclease ABC, C subunit-like; n=4; ... 45 0.002
UniRef50_Q3CK93 Cluster: Excinuclease ABC, C subunit, N-terminal... 45 0.002
UniRef50_Q9J856 Cluster: ORF81; n=2; Nucleopolyhedrovirus|Rep: O... 44 0.003
UniRef50_Q15PT6 Cluster: Excinuclease ABC, C subunit-like; n=1; ... 44 0.003
UniRef50_Q8P698 Cluster: UPF0213 protein XCC3072; n=7; Proteobac... 44 0.003
UniRef50_Q1QV31 Cluster: Excinuclease ABC, C subunit-like protei... 44 0.004
UniRef50_Q4L3E5 Cluster: UPF0213 protein SH2523; n=25; cellular ... 44 0.004
UniRef50_A6T193 Cluster: Uncharacterized conserved protein; n=1;... 44 0.005
UniRef50_Q8E0F5 Cluster: UPF0213 protein SAG0778; n=8; Streptoco... 44 0.005
UniRef50_Q88VJ1 Cluster: UPF0213 protein lp_2058; n=6; Lactobaci... 44 0.005
UniRef50_Q91EZ0 Cluster: ORF65 similar to AcMNPV ORF79; n=1; Cyd... 43 0.007
UniRef50_A0EYW6 Cluster: Gp41; n=1; Ecotropis obliqua NPV|Rep: G... 43 0.007
UniRef50_Q0IKZ8 Cluster: ORF121; n=1; Leucania separata nuclear ... 43 0.009
UniRef50_Q30TF2 Cluster: Excinuclease ABC, C subunit-like; n=2; ... 43 0.009
UniRef50_A4J4G2 Cluster: Excinuclease ABC, C subunit domain prot... 43 0.009
UniRef50_Q80LN4 Cluster: Putative uncharacterized protein; n=1; ... 42 0.011
UniRef50_Q7NMN4 Cluster: Gll0731 protein; n=1; Gloeobacter viola... 42 0.011
UniRef50_Q2S0D1 Cluster: GIY-YIG catalytic domain, putative; n=3... 42 0.011
UniRef50_Q1LH87 Cluster: Excinuclease ABC, C subunit-like protei... 42 0.011
UniRef50_Q39DX9 Cluster: Excinuclease ABC, C subunit-like; n=9; ... 42 0.015
UniRef50_A4JGU7 Cluster: Excinuclease ABC, C subunit domain prot... 42 0.015
UniRef50_Q461Z4 Cluster: Orf71; n=2; Nucleopolyhedrovirus|Rep: O... 42 0.020
UniRef50_Q598P4 Cluster: ORF104; n=5; Nucleopolyhedrovirus|Rep: ... 40 0.046
UniRef50_A7NLC7 Cluster: Excinuclease ABC C subunit domain prote... 40 0.046
UniRef50_A4G800 Cluster: Putative uncharacterized protein; n=3; ... 40 0.046
UniRef50_Q81W06 Cluster: UPF0213 protein BA_0032/GBAA0032/BAS003... 40 0.046
UniRef50_A5FNC4 Cluster: Excinuclease ABC, C subunit domain prot... 40 0.061
UniRef50_Q97PR7 Cluster: UPF0213 protein SP_1535; n=73; Bacilli|... 40 0.081
UniRef50_Q4UMD7 Cluster: Excinuclease ABC, C subunit, N-terminal... 39 0.11
UniRef50_A6GJZ6 Cluster: Excinuclease ABC, C subunit-like protei... 39 0.11
UniRef50_Q9RHE8 Cluster: Putative uncharacterized protein; n=1; ... 38 0.19
UniRef50_Q4AQ38 Cluster: Excinuclease ABC, C subunit, N-terminal... 38 0.19
UniRef50_A1G1C7 Cluster: Excinuclease ABC, C subunit-like; n=2; ... 38 0.19
UniRef50_A0NJ82 Cluster: Methyltransferase; n=2; Oenococcus oeni... 38 0.25
UniRef50_Q51440 Cluster: UPF0213 protein in ldhD 5'region; n=3; ... 38 0.25
UniRef50_UPI00003839BD Cluster: COG2827: Predicted endonuclease ... 38 0.33
UniRef50_Q0VNB7 Cluster: Putative uncharacterized protein; n=1; ... 38 0.33
UniRef50_A3WNM7 Cluster: Predicted endonuclease containing a URI... 38 0.33
UniRef50_Q193D5 Cluster: Excinuclease ABC, C subunit-like; n=2; ... 37 0.43
UniRef50_Q0LV83 Cluster: Excinuclease ABC, C subunit-like; n=1; ... 37 0.43
UniRef50_Q0LU34 Cluster: Excinuclease ABC, C subunit-like; n=4; ... 37 0.43
UniRef50_Q07QY7 Cluster: Excinuclease ABC, C subunit domain prot... 37 0.43
UniRef50_Q4FLX0 Cluster: Excinuclease ABC; n=2; Candidatus Pelag... 37 0.57
UniRef50_Q3STS6 Cluster: Excinuclease ABC, C subunit; n=3; Rhizo... 37 0.57
UniRef50_Q9CEL6 Cluster: UPF0213 protein ysiG; n=3; Lactococcus ... 37 0.57
UniRef50_O31414 Cluster: UPF0213 protein yazA; n=4; Bacillus|Rep... 37 0.57
UniRef50_Q4UJM5 Cluster: Endo/excinuclease amino terminal domain... 36 0.76
UniRef50_Q2G9S1 Cluster: Excinuclease ABC, C subunit-like protei... 36 0.76
UniRef50_Q1PYT5 Cluster: Predicted orf; n=1; Candidatus Kuenenia... 36 0.76
UniRef50_Q84LK0 Cluster: DNA mismatch repair protein; n=7; core ... 36 0.76
UniRef50_P95364 Cluster: UPF0213 protein in glnA 3'region; n=5; ... 36 0.76
UniRef50_Q9YMP0 Cluster: LdOrf-87 peptide; n=1; Lymantria dispar... 36 1.00
UniRef50_Q2G9Y5 Cluster: Excinuclease ABC, C subunit-like protei... 36 1.00
UniRef50_A1RI21 Cluster: Excinuclease ABC, C subunit domain prot... 36 1.00
UniRef50_Q6QXL5 Cluster: ORF95; n=9; Granulovirus|Rep: ORF95 - A... 36 1.3
UniRef50_Q186F2 Cluster: Putative endonuclease; n=1; Clostridium... 36 1.3
UniRef50_Q5UPY6 Cluster: Uncharacterized protein L300; n=1; Acan... 36 1.3
UniRef50_Q8DE33 Cluster: Predicted endonuclease; n=7; Proteobact... 35 2.3
UniRef50_A5VJC3 Cluster: Excinuclease ABC, C subunit domain prot... 34 3.0
UniRef50_A5FFT3 Cluster: Excinuclease ABC, C subunit domain prot... 34 3.0
UniRef50_Q8RIL3 Cluster: UPF0213 protein FN1575; n=3; Fusobacter... 34 3.0
UniRef50_Q5WYF4 Cluster: Putative uncharacterized protein; n=3; ... 34 4.0
UniRef50_Q1GQY7 Cluster: Excinuclease ABC, C subunit-like protei... 34 4.0
UniRef50_A3XQ90 Cluster: Endo/excinuclease amino terminal domain... 34 4.0
UniRef50_A3J1S6 Cluster: Predicted endonuclease containing a URI... 34 4.0
UniRef50_A0W851 Cluster: Excinuclease ABC, C subunit-like; n=2; ... 34 4.0
UniRef50_Q0LXL6 Cluster: Excinuclease ABC, C subunit-like; n=3; ... 33 5.3
UniRef50_Q9FHS4 Cluster: Emb|CAB76036.1; n=1; Arabidopsis thalia... 33 5.3
UniRef50_Q14PT1 Cluster: Putative uncharacterized protein yazA; ... 33 7.0
UniRef50_A2U060 Cluster: Putative uncharacterized protein; n=1; ... 33 7.0
UniRef50_Q54HP2 Cluster: Putative uncharacterized protein; n=1; ... 33 7.0
UniRef50_Q0UAL6 Cluster: Putative uncharacterized protein; n=1; ... 33 7.0
UniRef50_A3HT36 Cluster: Putative uncharacterized protein; n=1; ... 33 9.3
UniRef50_A7SFM6 Cluster: Predicted protein; n=1; Nematostella ve... 33 9.3
UniRef50_Q8EZM8 Cluster: 4-diphosphocytidyl-2-C-methyl-D-erythri... 33 9.3
>UniRef50_Q06692 Cluster: UPF0213 protein in VLF1-GP41 intergenic
region; n=12; Nucleopolyhedrovirus|Rep: UPF0213 protein
in VLF1-GP41 intergenic region - Autographa californica
nuclear polyhedrosis virus (AcMNPV)
Length = 104
Score = 189 bits (460), Expect = 7e-47
Identities = 87/88 (98%), Positives = 87/88 (98%)
Frame = +1
Query: 175 MATTLYTNKVWCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSA 354
MATTLYTNKVWCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSA
Sbjct: 1 MATTLYTNKVWCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSA 60
Query: 355 SAYDYKTAARMEYNLKRKCSKYFKLRLI 438
SAYDY TAARMEYNLKRKCSKYFKLRLI
Sbjct: 61 SAYDYNTAARMEYNLKRKCSKYFKLRLI 88
>UniRef50_Q06693 Cluster: Uncharacterized 12.5 kDa protein in
VLF1-GP41 intergenic region; n=12;
Nucleopolyhedrovirus|Rep: Uncharacterized 12.5 kDa
protein in VLF1-GP41 intergenic region - Autographa
californica nuclear polyhedrosis virus (AcMNPV)
Length = 109
Score = 141 bits (342), Expect = 1e-32
Identities = 69/75 (92%), Positives = 72/75 (96%)
Frame = +3
Query: 492 MNLDVPYYRLGNHEKVEYIPLKLALNDDITSEPQQFSEPVYKMPIDDMMVGYNNTTSNVS 671
MNLDVPYYRLGNHEKVEYIPLKLALNDD SEPQQFSEPV+KMPI+D MVGY+NTTSNVS
Sbjct: 1 MNLDVPYYRLGNHEKVEYIPLKLALNDDTASEPQQFSEPVHKMPIND-MVGYDNTTSNVS 59
Query: 672 AGIIILISVVAFIAL 716
AGIIILISVVAFIAL
Sbjct: 60 AGIIILISVVAFIAL 74
>UniRef50_Q06VJ4 Cluster: Putative uncharacterized protein; n=1;
Trichoplusia ni ascovirus 2c|Rep: Putative
uncharacterized protein - Trichoplusia ni ascovirus 2c
Length = 135
Score = 100 bits (240), Expect = 3e-20
Identities = 43/85 (50%), Positives = 61/85 (71%)
Frame = +1
Query: 184 TLYTNKVWCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSASAY 363
++YT +WC+Y++R G +YTGITSN+++R KQH + GAKCLR+ T L VY S Y
Sbjct: 9 SVYTKNIWCLYMIRMPCGSIYTGITSNVDKRFKQHCDGTGAKCLRSKTPLVKVYSSPCVY 68
Query: 364 DYKTAARMEYNLKRKCSKYFKLRLI 438
D+KT AR+EY +K + +K FK +LI
Sbjct: 69 DHKTVARIEYEIKHRRNKSFKEKLI 93
>UniRef50_P32651 Cluster: Structural glycoprotein gp41; n=34;
Nucleopolyhedrovirus|Rep: Structural glycoprotein gp41 -
Autographa californica nuclear polyhedrosis virus
(AcMNPV)
Length = 409
Score = 93.9 bits (223), Expect = 4e-18
Identities = 43/55 (78%), Positives = 45/55 (81%)
Frame = +2
Query: 2 HLTKNACQDSLTELAFQNETLRRFIFQQINYNKDXXXXXXXXXPNVTRPNTKGRT 166
HLTK+ACQ+SLTELAFQNETLRRFIFQQINYNKD PN TRPNTKGRT
Sbjct: 354 HLTKSACQESLTELAFQNETLRRFIFQQINYNKDANAIIAAAAPNATRPNTKGRT 408
>UniRef50_Q8JMD7 Cluster: Putative uncharacterized protein; n=2;
Nucleopolyhedrovirus|Rep: Putative uncharacterized
protein - Mamestra configurata NPV-B
Length = 98
Score = 83.0 bits (196), Expect = 7e-15
Identities = 37/74 (50%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
Frame = +1
Query: 202 VWCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATN-LRLVYHSASAYDYKTA 378
+WC+Y++R LYTGIT N++RR QH+ +GAKCLR + N L+L Y + S Y Y+
Sbjct: 1 MWCLYLIRAKGDMLYTGITKNISRRFYQHNKGRGAKCLRASKNALQLAYVTPSTYTYRQV 60
Query: 379 ARMEYNLKRKCSKY 420
AR EY LKRK K+
Sbjct: 61 ARAEYKLKRKPKKF 74
>UniRef50_Q80LJ7 Cluster: Putative uncharacterized protein; n=1;
Adoxophyes honmai NPV|Rep: Putative uncharacterized
protein - Adoxophyes honmai nucleopolyhedrovirus
Length = 96
Score = 79.0 bits (186), Expect = 1e-13
Identities = 37/84 (44%), Positives = 54/84 (64%)
Frame = +1
Query: 187 LYTNKVWCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSASAYD 366
++ + WCVYI+R NG+LYTG+++ + R + H N +GAKCLR T L LVY + S
Sbjct: 1 MFKSNSWCVYIIRMPNGRLYTGMSNRVLNRFRDHCNGRGAKCLRGKTPLALVYKTESCLT 60
Query: 367 YKTAARMEYNLKRKCSKYFKLRLI 438
K AAR+E ++K SK K ++I
Sbjct: 61 RKEAARLEIHIK-NLSKKAKEKII 83
>UniRef50_Q0E564 Cluster: 13 kDa GIY-YIG-like endonuclease; n=1;
Spodoptera frugiperda ascovirus 1a|Rep: 13 kDa
GIY-YIG-like endonuclease - Spodoptera frugiperda
ascovirus 1a
Length = 112
Score = 73.3 bits (172), Expect = 5e-12
Identities = 31/75 (41%), Positives = 46/75 (61%)
Frame = +1
Query: 205 WCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSASAYDYKTAAR 384
W +Y+++ NG +YTG + ++ RR K H + +GAKCLR A LRL++ S + A
Sbjct: 7 WKLYMIQMVNGNIYTGASKDVERRFKMHCSGRGAKCLRGAQGLRLIWTSDETFTKSEALS 66
Query: 385 MEYNLKRKCSKYFKL 429
+EY LKR C + KL
Sbjct: 67 LEYRLKRACDHHAKL 81
>UniRef50_Q91FT0 Cluster: 242L; n=1; Invertebrate iridescent virus
6|Rep: 242L - Chilo iridescent virus (CIV) (Insect
iridescent virus type 6)
Length = 99
Score = 68.9 bits (161), Expect = 1e-10
Identities = 31/78 (39%), Positives = 51/78 (65%)
Frame = +1
Query: 205 WCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSASAYDYKTAAR 384
W +Y++ NG +YTGI++N+ +R H N +GAKCLR L+L + S + Y + AA
Sbjct: 7 WNIYMVTMKNGNIYTGISNNVLKRFDTHCNGKGAKCLRGKGPLKLSWFSKANYSHGEAAS 66
Query: 385 MEYNLKRKCSKYFKLRLI 438
+EY +K++ +K KL++I
Sbjct: 67 LEYTIKKQ-TKKVKLQII 83
>UniRef50_Q6D994 Cluster: UPF0213 protein ECA0725; n=6;
Enterobacteriaceae|Rep: UPF0213 protein ECA0725 -
Erwinia carotovora subsp. atroseptica (Pectobacterium
atrosepticum)
Length = 103
Score = 64.5 bits (150), Expect = 2e-09
Identities = 35/78 (44%), Positives = 49/78 (62%)
Frame = +1
Query: 205 WCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSASAYDYKTAAR 384
W +Y+LR G LYTGIT++++RR+ QH +GAK LR L LV+H A D A +
Sbjct: 10 WYLYMLRTVAGALYTGITTDVSRRMNQHQAGKGAKALRGKGELTLVFH-CLAGDRSNALK 68
Query: 385 MEYNLKRKCSKYFKLRLI 438
+EY +K + SK K RL+
Sbjct: 69 LEYRIK-QLSKSQKERLV 85
>UniRef50_Q9PYW8 Cluster: ORF75; n=1; Xestia c-nigrum
granulovirus|Rep: ORF75 - Xestia c-nigrum granulosis
virus (XnGV) (Xestia c-nigrumgranulovirus)
Length = 97
Score = 61.3 bits (142), Expect = 2e-08
Identities = 31/82 (37%), Positives = 52/82 (63%)
Frame = +1
Query: 193 TNKVWCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSASAYDYK 372
++K W +Y+++ + LYTG++ +++RR + H + +GAK LRN L+LVY S + +
Sbjct: 4 SDKSWELYMVQTPHQMLYTGVSVDVDRRFRLHCSGRGAKFLRNKQPLQLVYRSKCRFTHS 63
Query: 373 TAARMEYNLKRKCSKYFKLRLI 438
A +EY +K+ C K KL LI
Sbjct: 64 EALVVEYRVKKWC-KSKKLLLI 84
>UniRef50_Q2SQ04 Cluster: Predicted endonuclease containing a URI
domain; n=1; Hahella chejuensis KCTC 2396|Rep: Predicted
endonuclease containing a URI domain - Hahella
chejuensis (strain KCTC 2396)
Length = 105
Score = 58.8 bits (136), Expect = 1e-07
Identities = 32/78 (41%), Positives = 45/78 (57%)
Frame = +1
Query: 205 WCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSASAYDYKTAAR 384
WCVY+L + LYTGIT+N +R + H GAK R +RL+Y + +D +A+R
Sbjct: 11 WCVYMLLVSDNSLYTGITNNPAKRFRDHLQGSGAKYFRGRKPVRLLY-AEVGHDRASASR 69
Query: 385 MEYNLKRKCSKYFKLRLI 438
E +K K + KLRLI
Sbjct: 70 REIEIK-KLKRSGKLRLI 86
>UniRef50_P67349 Cluster: UPF0213 protein yhbQ; n=22;
Enterobacteriaceae|Rep: UPF0213 protein yhbQ -
Salmonella typhimurium
Length = 100
Score = 58.4 bits (135), Expect = 2e-07
Identities = 31/78 (39%), Positives = 47/78 (60%)
Frame = +1
Query: 205 WCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSASAYDYKTAAR 384
W +Y++R + LYTGIT+++ RR +QH +GAK LR L L + +A D A R
Sbjct: 4 WYLYLIRTADNALYTGITTDVARRYRQHQTGKGAKALRGKGELTLAF-AAQVGDRSLALR 62
Query: 385 MEYNLKRKCSKYFKLRLI 438
+EY +K + +K K RL+
Sbjct: 63 IEYRIK-QLTKRQKERLV 79
>UniRef50_Q1JZM0 Cluster: Excinuclease ABC, C subunit-like; n=2;
Bacteria|Rep: Excinuclease ABC, C subunit-like -
Desulfuromonas acetoxidans DSM 684
Length = 86
Score = 58.0 bits (134), Expect = 2e-07
Identities = 27/67 (40%), Positives = 43/67 (64%)
Frame = +1
Query: 205 WCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSASAYDYKTAAR 384
W VYI+R + LYTGIT++L RR QH++ +GA+ R + +VYH S ++ +A+R
Sbjct: 6 WLVYIIRCRDNSLYTGITTDLERRFAQHASGRGARYFRGHEPIEVVYHE-SGHNRSSASR 64
Query: 385 MEYNLKR 405
E +K+
Sbjct: 65 REAAIKK 71
>UniRef50_A0KPI3 Cluster: Endo/excinuclease domain protein; n=2;
Aeromonas|Rep: Endo/excinuclease domain protein -
Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966
/ NCIB 9240)
Length = 136
Score = 57.6 bits (133), Expect = 3e-07
Identities = 30/78 (38%), Positives = 50/78 (64%)
Frame = +1
Query: 205 WCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSASAYDYKTAAR 384
W +Y++R +G LYTGI+++ RR++QH + +G++ LR L L + A + A R
Sbjct: 19 WFIYMVRTASGLLYTGISTDPLRRLRQHQSGKGSRALRGKGPLTLAWQQAVG-EKGAALR 77
Query: 385 MEYNLKRKCSKYFKLRLI 438
+EY LK++ SK FK +L+
Sbjct: 78 LEYRLKQQ-SKAFKEQLL 94
>UniRef50_A0EYZ1 Cluster: Endonuclease; n=1; Ecotropis obliqua
NPV|Rep: Endonuclease - Ecotropis obliqua NPV
Length = 109
Score = 56.4 bits (130), Expect = 7e-07
Identities = 29/82 (35%), Positives = 50/82 (60%)
Frame = +1
Query: 193 TNKVWCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSASAYDYK 372
+ +++ +Y++ ++G+LY GI S++ +R +QH G+K LRN + LVY S +
Sbjct: 3 SQRLYALYLIETEHGQLYAGIASDVKKRFRQHYRSAGSKFLRN-KQINLVYFSPNFMCLS 61
Query: 373 TAARMEYNLKRKCSKYFKLRLI 438
A R+E +KR+ S FK +LI
Sbjct: 62 CALRIEKRVKRQ-SVTFKRKLI 82
>UniRef50_Q9KLK4 Cluster: UPF0213 protein VC_A0739; n=29;
Gammaproteobacteria|Rep: UPF0213 protein VC_A0739 -
Vibrio cholerae
Length = 101
Score = 56.0 bits (129), Expect = 9e-07
Identities = 27/66 (40%), Positives = 38/66 (57%)
Frame = +1
Query: 205 WCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSASAYDYKTAAR 384
W VY++R N LY GIT++++RR QH +GAK LR L LV+ A A +
Sbjct: 11 WFVYLVRCANNALYCGITTDVSRRFAQHQKGRGAKALRGKGPLELVWSLPVADGKSAALK 70
Query: 385 MEYNLK 402
+EY +K
Sbjct: 71 LEYRIK 76
>UniRef50_A7HV75 Cluster: Excinuclease ABC C subunit domain protein;
n=1; Parvibaculum lavamentivorans DS-1|Rep: Excinuclease
ABC C subunit domain protein - Parvibaculum
lavamentivorans DS-1
Length = 96
Score = 55.2 bits (127), Expect = 2e-06
Identities = 30/69 (43%), Positives = 41/69 (59%)
Frame = +1
Query: 199 KVWCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSASAYDYKTA 378
K W VYIL G+LYTGIT ++ R K H++ +GAK R+ RLV+ A D A
Sbjct: 7 KPWYVYILECTGGRLYTGITVDVPMRYKAHASGKGAKFTRSYRPERLVFQQAFV-DRAAA 65
Query: 379 ARMEYNLKR 405
A+ EY +K+
Sbjct: 66 AKAEYAIKQ 74
>UniRef50_A4CD43 Cluster: Putative uncharacterized protein; n=1;
Pseudoalteromonas tunicata D2|Rep: Putative
uncharacterized protein - Pseudoalteromonas tunicata D2
Length = 105
Score = 54.8 bits (126), Expect = 2e-06
Identities = 26/67 (38%), Positives = 41/67 (61%)
Frame = +1
Query: 202 VWCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSASAYDYKTAA 381
+W +Y++ G YTGIT+++ RR KQH + +GAK LR T L+LV+ S A+
Sbjct: 3 IWFIYLIETPIGHWYTGITTDVERRFKQHQSGKGAKNLRGKTPLKLVF-STPVGTRSEAS 61
Query: 382 RMEYNLK 402
++E +K
Sbjct: 62 KLEAKIK 68
>UniRef50_A0YDW5 Cluster: Putative uncharacterized protein; n=1;
marine gamma proteobacterium HTCC2143|Rep: Putative
uncharacterized protein - marine gamma proteobacterium
HTCC2143
Length = 88
Score = 54.8 bits (126), Expect = 2e-06
Identities = 31/83 (37%), Positives = 51/83 (61%), Gaps = 3/83 (3%)
Frame = +1
Query: 199 KVWCVYILRQDNGKLYTGITSNLNRRIKQH---SNKQGAKCLRNATNLRLVYHSASAYDY 369
K W +YI+ ++GKLYTGIT++++RR +H +N +GAK R+ +VY + D
Sbjct: 5 KTWWLYIVETESGKLYTGITTDVDRRFHEHFDKNNSRGAKFFRSDPAKAVVY-TEPCVDR 63
Query: 370 KTAARMEYNLKRKCSKYFKLRLI 438
A++ EY +K K S+ K ++I
Sbjct: 64 ADASKREYVVK-KMSRLKKTQMI 85
>UniRef50_Q725W6 Cluster: UPF0213 protein DVU_3309; n=2;
Desulfovibrio vulgaris subsp. vulgaris|Rep: UPF0213
protein DVU_3309 - Desulfovibrio vulgaris (strain
Hildenborough / ATCC 29579 / NCIMB8303)
Length = 110
Score = 54.8 bits (126), Expect = 2e-06
Identities = 28/71 (39%), Positives = 42/71 (59%)
Frame = +1
Query: 196 NKVWCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSASAYDYKT 375
++VW VY+LR +G LY G+T+N+ RR+ QH +GA+ R L+ H A
Sbjct: 7 DEVWFVYLLRCADGTLYCGVTNNIERRLTQHHRGRGARYTRGRAPFILLGH-APFPGRGE 65
Query: 376 AARMEYNLKRK 408
A R+EY +KR+
Sbjct: 66 AQRVEYRIKRQ 76
>UniRef50_Q87GU3 Cluster: UPF0213 protein VPA1222; n=11;
Vibrionales|Rep: UPF0213 protein VPA1222 - Vibrio
parahaemolyticus
Length = 106
Score = 53.6 bits (123), Expect = 5e-06
Identities = 27/68 (39%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Frame = +1
Query: 205 WCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSASAYDYK-TAA 381
W VY++R + LY G+T+++ RR KQH +GAK L+ L L + ++++D K TA
Sbjct: 9 WSVYLIRNNRNALYCGVTNDIERRFKQHQLGKGAKALKGKGPLVLEW--STSFDSKVTAM 66
Query: 382 RMEYNLKR 405
R EY +K+
Sbjct: 67 RAEYFIKQ 74
>UniRef50_Q6AJN1 Cluster: UPF0213 protein DP2720; n=3; cellular
organisms|Rep: UPF0213 protein DP2720 - Desulfotalea
psychrophila
Length = 110
Score = 53.6 bits (123), Expect = 5e-06
Identities = 28/68 (41%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Frame = +1
Query: 205 WCVYILRQDNGKLYTGITSNLNRRIKQH-SNKQGAKCLRNATNLRLVYHSASAYDYKTAA 381
W VYI++ +G LYTGIT+N+ RRI +H S+ +GA+ R+ + LVY + D A+
Sbjct: 14 WFVYIVQCADGTLYTGITTNIARRITEHNSSAKGARYTRSRRPVMLVYRE-TCRDRSEAS 72
Query: 382 RMEYNLKR 405
+ EY +K+
Sbjct: 73 KREYAIKQ 80
>UniRef50_A6F7V2 Cluster: Excinuclease ABC, C subunit, N-terminal;
n=1; Moritella sp. PE36|Rep: Excinuclease ABC, C
subunit, N-terminal - Moritella sp. PE36
Length = 87
Score = 53.2 bits (122), Expect = 6e-06
Identities = 31/79 (39%), Positives = 44/79 (55%)
Frame = +1
Query: 202 VWCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSASAYDYKTAA 381
+W VY++ D G LY GIT+++ RR +QH GAK R A +R+ Y D A+
Sbjct: 6 LWIVYLIETDAG-LYCGITTDMERRYQQHCKGTGAKFFRRAKPIRIAYTEIQP-DRSRAS 63
Query: 382 RMEYNLKRKCSKYFKLRLI 438
+ EY +K+ K KL LI
Sbjct: 64 KREYAIKQLPRKQ-KLALI 81
>UniRef50_Q6LJI0 Cluster: Putative uncharacterized protein C3908;
n=2; Photobacterium profundum|Rep: Putative
uncharacterized protein C3908 - Photobacterium profundum
(Photobacterium sp. (strain SS9))
Length = 116
Score = 52.8 bits (121), Expect = 8e-06
Identities = 25/69 (36%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Frame = +1
Query: 202 VWCVYILRQDNGKLYTGITSNLNRRIKQH-SNKQGAKCLRNATNLRLVYHSASAYDYKTA 378
+W VY++R + LY G+T+++ RR +H S K+GAK L+ L L +H D + A
Sbjct: 28 IWSVYLIRTVSNTLYCGVTTDVQRRYSEHQSGKKGAKYLKGKGPLTLAWHE-EVGDKRLA 86
Query: 379 ARMEYNLKR 405
++EY +K+
Sbjct: 87 MQIEYRIKQ 95
>UniRef50_A3Y6M7 Cluster: Putative uncharacterized protein; n=1;
Marinomonas sp. MED121|Rep: Putative uncharacterized
protein - Marinomonas sp. MED121
Length = 120
Score = 52.4 bits (120), Expect = 1e-05
Identities = 29/81 (35%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
Frame = +1
Query: 202 VWCVYILRQDNGKLYTGITSNLNRRIKQH--SNKQGAKCLRNATNLRLVYHSASAYDYKT 375
VW VY++R LY G+T++++RR ++H ++K+GA+ LR L L++H D +
Sbjct: 27 VWSVYLIRTRLNTLYAGVTTDVDRRFQEHASNSKKGARYLRGKGPLALMWHQEIG-DKRE 85
Query: 376 AARMEYNLKRKCSKYFKLRLI 438
A +EY +K + + KL LI
Sbjct: 86 AMSLEYKIK-QIDRKKKLSLI 105
>UniRef50_Q2C4T8 Cluster: Putative uncharacterized protein; n=2;
Vibrionaceae|Rep: Putative uncharacterized protein -
Photobacterium sp. SKA34
Length = 105
Score = 52.0 bits (119), Expect = 1e-05
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Frame = +1
Query: 205 WCVYILRQDNGKLYTGITSNLNRRIKQHS-NKQGAKCLRNATNLRLVYHSASAYDYKTAA 381
W VY++R + LY G+T+++ RR +H +K+GAK L+ L L + S ++ + A
Sbjct: 12 WYVYLIRTSSNTLYCGVTTDIERRFAEHQHSKKGAKYLKGKGPLTLAW-SQKVFNKRDAM 70
Query: 382 RMEYNLKRKCSKYFKLRLI 438
EY +K +K K +LI
Sbjct: 71 VFEYKIKNTLTKASKEQLI 89
>UniRef50_Q3IE32 Cluster: Putative uncharacterized protein; n=2;
Alteromonadales|Rep: Putative uncharacterized protein -
Pseudoalteromonas haloplanktis (strain TAC 125)
Length = 104
Score = 50.4 bits (115), Expect = 4e-05
Identities = 24/68 (35%), Positives = 40/68 (58%)
Frame = +1
Query: 202 VWCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSASAYDYKTAA 381
+W +YI++ G YTGIT+N+ +R+ H GAK L+ L L+ H S + A+
Sbjct: 22 IWYLYIVQTRYGHWYTGITTNVEQRLATHQAGNGAKNLKGKGPLLLI-HQHSVGNKSAAS 80
Query: 382 RMEYNLKR 405
++EY +K+
Sbjct: 81 KLEYQVKK 88
>UniRef50_Q0F3H4 Cluster: Putative uncharacterized protein; n=1;
Mariprofundus ferrooxydans PV-1|Rep: Putative
uncharacterized protein - Mariprofundus ferrooxydans
PV-1
Length = 97
Score = 50.0 bits (114), Expect = 6e-05
Identities = 28/78 (35%), Positives = 46/78 (58%)
Frame = +1
Query: 205 WCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSASAYDYKTAAR 384
W +Y++R G+LYTGIT+++ RR+ +H + +GAK LR L L + + + A +
Sbjct: 12 WSLYMIRCKGGQLYTGITTHVERRLAEHQSGKGAKFLRGKGPLVLAF-QRNIGSHSEALK 70
Query: 385 MEYNLKRKCSKYFKLRLI 438
E +K K +K K R+I
Sbjct: 71 TEAAIK-KMAKADKERII 87
>UniRef50_Q089V4 Cluster: Excinuclease ABC, C subunit domain
protein; n=2; Shewanella|Rep: Excinuclease ABC, C
subunit domain protein - Shewanella frigidimarina
(strain NCIMB 400)
Length = 107
Score = 50.0 bits (114), Expect = 6e-05
Identities = 32/80 (40%), Positives = 46/80 (57%), Gaps = 2/80 (2%)
Frame = +1
Query: 205 WCVYILRQDNGKLYTGITSNLNRRIKQH--SNKQGAKCLRNATNLRLVYHSASAYDYKTA 378
W +YI+R N LYTGIT+++ RR +H S + AK L+ L LVY + A D A
Sbjct: 19 WYLYIIRCANSHLYTGITTDIARRFAEHQASGPKAAKYLKGKGPLTLVYQESLA-DRSEA 77
Query: 379 ARMEYNLKRKCSKYFKLRLI 438
++ E +K K ++ KL LI
Sbjct: 78 SKREITVK-KYTRQQKLLLI 96
>UniRef50_A6VVA2 Cluster: Excinuclease ABC C subunit domain protein;
n=1; Marinomonas sp. MWYL1|Rep: Excinuclease ABC C
subunit domain protein - Marinomonas sp. MWYL1
Length = 112
Score = 49.2 bits (112), Expect = 1e-04
Identities = 29/80 (36%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Frame = +1
Query: 205 WCVYILRQDNGKLYTGITSNLNRRIKQHS--NKQGAKCLRNATNLRLVYHSASAYDYKTA 378
W +Y+++ LYTGI+++++RR K+HS +K+GA+ L+ L LV+H S A
Sbjct: 16 WSLYMIKTRLNTLYTGISTDVDRRFKEHSGVSKRGARYLKGKGPLELVWHQ-SVGSKSDA 74
Query: 379 ARMEYNLKRKCSKYFKLRLI 438
+E+ +K K ++ KL LI
Sbjct: 75 LVLEHKVK-KLNRRQKLSLI 93
>UniRef50_Q1PZH5 Cluster: Putative uncharacterized protein; n=1;
Candidatus Kuenenia stuttgartiensis|Rep: Putative
uncharacterized protein - Candidatus Kuenenia
stuttgartiensis
Length = 102
Score = 48.8 bits (111), Expect = 1e-04
Identities = 26/69 (37%), Positives = 41/69 (59%), Gaps = 2/69 (2%)
Frame = +1
Query: 205 WCVYILRQDNGKLYTGITSNLNRRIKQHS--NKQGAKCLRNATNLRLVYHSASAYDYKTA 378
W +Y++R +G+LYTGIT+++ RR +HS +K+G+K LR L LV A
Sbjct: 17 WFLYLIRCKHGRLYTGITTDVERRFAEHSSDDKKGSKYLRGKAPLTLVLKKKIG-SRSIA 75
Query: 379 ARMEYNLKR 405
+ME +K+
Sbjct: 76 LKMEARVKK 84
>UniRef50_Q9HXF2 Cluster: UPF0213 protein PA3854; n=15;
Pseudomonas|Rep: UPF0213 protein PA3854 - Pseudomonas
aeruginosa
Length = 104
Score = 48.4 bits (110), Expect = 2e-04
Identities = 32/87 (36%), Positives = 44/87 (50%)
Frame = +1
Query: 178 ATTLYTNKVWCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSAS 357
A T K W VY++R +NG LY GI+ + RR H + +GA+ ++ LVY A
Sbjct: 6 AATAAIGKCWSVYLVRAENGALYCGISDDPLRRFDTHCSGKGARFFHSSPARALVYVEAC 65
Query: 358 AYDYKTAARMEYNLKRKCSKYFKLRLI 438
A A R E +K SK K RL+
Sbjct: 66 A-SKGDALRRERAIK-ALSKRAKERLL 90
>UniRef50_Q0I0G8 Cluster: Excinuclease ABC, C subunit domain
protein; n=12; Shewanella|Rep: Excinuclease ABC, C
subunit domain protein - Shewanella sp. (strain MR-7)
Length = 141
Score = 48.0 bits (109), Expect = 2e-04
Identities = 32/80 (40%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Frame = +1
Query: 205 WCVYILRQDNGKLYTGITSNLNRRIKQH--SNKQGAKCLRNATNLRLVYHSASAYDYKTA 378
W +Y++R NG LYTGIT+++ RR +H S+ + AK LR L L+Y + A
Sbjct: 57 WYLYLIRCANGHLYTGITTDVARRFNEHQSSSPKAAKYLRGKGPLTLMYQE-TVGSRGDA 115
Query: 379 ARMEYNLKRKCSKYFKLRLI 438
R E +K K S+ KL LI
Sbjct: 116 LRREIAVK-KLSRAQKLALI 134
>UniRef50_Q0IL29 Cluster: ORF90; n=1; Leucania separata nuclear
polyhedrosis virus|Rep: ORF90 - Leucania separata
nuclear polyhedrosis virus (LsNPV)
Length = 100
Score = 47.6 bits (108), Expect = 3e-04
Identities = 19/27 (70%), Positives = 24/27 (88%)
Frame = +3
Query: 492 MNLDVPYYRLGNHEKVEYIPLKLALND 572
MNLD+PY RLG +KV+YIP+KLA+ND
Sbjct: 1 MNLDIPYDRLGTSDKVDYIPMKLAVND 27
>UniRef50_Q21GK3 Cluster: Excinuclease ABC, C subunit-like protein;
n=1; Saccharophagus degradans 2-40|Rep: Excinuclease
ABC, C subunit-like protein - Saccharophagus degradans
(strain 2-40 / ATCC 43961 / DSM 17024)
Length = 106
Score = 47.6 bits (108), Expect = 3e-04
Identities = 29/79 (36%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Frame = +1
Query: 205 WCVYILRQDNGKLYTGITSNLNRRIKQHSN-KQGAKCLRNATNLRLVYHSASAYDYKTAA 381
W VYIL+ +G YTG+T ++ RR+ +H++ K GAK R +++VY S + D A
Sbjct: 12 WQVYILQCADGSYYTGVTVDIARRVHEHNHAKLGAKYTRARRPVKVVY-SEACIDRSAAC 70
Query: 382 RMEYNLKRKCSKYFKLRLI 438
+ E +K K + K+ LI
Sbjct: 71 KREAAIK-KLPRSAKVALI 88
>UniRef50_A4LZS0 Cluster: Excinuclease ABC, C subunit domain
protein; n=4; Proteobacteria|Rep: Excinuclease ABC, C
subunit domain protein - Geobacter bemidjiensis Bem
Length = 93
Score = 47.6 bits (108), Expect = 3e-04
Identities = 23/66 (34%), Positives = 38/66 (57%)
Frame = +1
Query: 205 WCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSASAYDYKTAAR 384
W VYI+ +G YTGIT+++ RR++QH+ GAK R +++ +D +A+R
Sbjct: 3 WQVYIILCSDGTFYTGITTDIARRLRQHATGSGAKYFRGRRPEEVLF-LEGGHDRSSASR 61
Query: 385 MEYNLK 402
E +K
Sbjct: 62 RELYIK 67
>UniRef50_UPI0000E87E36 Cluster: hypothetical protein MB2181_00865;
n=1; Methylophilales bacterium HTCC2181|Rep:
hypothetical protein MB2181_00865 - Methylophilales
bacterium HTCC2181
Length = 102
Score = 47.2 bits (107), Expect = 4e-04
Identities = 27/77 (35%), Positives = 45/77 (58%)
Frame = +1
Query: 205 WCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSASAYDYKTAAR 384
W VYIL+ + LYTGIT+N+++RI+ H GAK + + +L++ + + +A++
Sbjct: 25 WFVYILKCSDDTLYTGITNNVSKRIEDHEKGVGAKYTKGRSPFQLLF-TEKHPNRSSASK 83
Query: 385 MEYNLKRKCSKYFKLRL 435
E +K SK KL L
Sbjct: 84 REIEIK-AFSKIEKLAL 99
>UniRef50_Q2ILJ9 Cluster: Excinuclease ABC, C subunit-like; n=2;
Cystobacterineae|Rep: Excinuclease ABC, C subunit-like -
Anaeromyxobacter dehalogenans (strain 2CP-C)
Length = 103
Score = 47.2 bits (107), Expect = 4e-04
Identities = 26/67 (38%), Positives = 38/67 (56%)
Frame = +1
Query: 205 WCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSASAYDYKTAAR 384
W VY+LR +G LY G T++L R+ +H+ +GA+ R+ + LV+ A D A R
Sbjct: 17 WWVYLLRCGDGSLYAGATNDLAARVARHAAGRGARYTRSRLPVELVWRE-RADDRGAALR 75
Query: 385 MEYNLKR 405
E LKR
Sbjct: 76 REAALKR 82
>UniRef50_A1S1V1 Cluster: Endonuclease containing a URI domain; n=1;
Shewanella amazonensis SB2B|Rep: Endonuclease containing
a URI domain - Shewanella amazonensis (strain ATCC
BAA-1098 / SB2B)
Length = 106
Score = 47.2 bits (107), Expect = 4e-04
Identities = 32/81 (39%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Frame = +1
Query: 202 VWCVYILRQDNGKLYTGITSNLNRRIKQH--SNKQGAKCLRNATNLRLVYHSASAYDYKT 375
+W +YI+R G+LYTG+T+N+ RR +H + AK LR L LVY +
Sbjct: 4 IWQLYIIRCATGELYTGVTTNVARRFDEHQCGGARAAKYLRGRGPLTLVYQE-NVGSRGD 62
Query: 376 AARMEYNLKRKCSKYFKLRLI 438
A R E +K K SK K LI
Sbjct: 63 ALRRELAVK-KLSKAAKEALI 82
>UniRef50_Q9KGL3 Cluster: UPF0213 protein BH0048; n=11;
Bacteria|Rep: UPF0213 protein BH0048 - Bacillus
halodurans
Length = 94
Score = 47.2 bits (107), Expect = 4e-04
Identities = 28/65 (43%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Frame = +1
Query: 211 VYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSASAYDYK-TAARM 387
VYIL +G YTG T++++RRIK+H++ +GAK R RLV + A+ K A R
Sbjct: 5 VYILECKDGSWYTGYTTDVDRRIKKHASGKGAKYTRGRGPFRLV--ATWAFPSKEEAMRW 62
Query: 388 EYNLK 402
EY +K
Sbjct: 63 EYEVK 67
>UniRef50_Q0HNZ9 Cluster: Excinuclease ABC, C subunit domain
protein; n=3; Shewanella|Rep: Excinuclease ABC, C
subunit domain protein - Shewanella sp. (strain MR-4)
Length = 139
Score = 46.8 bits (106), Expect = 5e-04
Identities = 31/80 (38%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Frame = +1
Query: 205 WCVYILRQDNGKLYTGITSNLNRRIKQH--SNKQGAKCLRNATNLRLVYHSASAYDYKTA 378
W +Y++R NG LYTGIT+++ RR +H S+ + AK LR L L+Y A
Sbjct: 57 WYLYLIRCANGHLYTGITTDVARRFNEHQSSSPKAAKYLRGKGPLTLMYQE-QVGTRSDA 115
Query: 379 ARMEYNLKRKCSKYFKLRLI 438
+ E +K K S+ KL LI
Sbjct: 116 LKREIAVK-KLSRSQKLALI 134
>UniRef50_A4B511 Cluster: Hypothetical URI domain endonuclease; n=1;
Alteromonas macleodii 'Deep ecotype'|Rep: Hypothetical
URI domain endonuclease - Alteromonas macleodii 'Deep
ecotype'
Length = 118
Score = 46.8 bits (106), Expect = 5e-04
Identities = 28/74 (37%), Positives = 43/74 (58%), Gaps = 4/74 (5%)
Frame = +1
Query: 196 NKVWCVYILRQDNGKLYTGITSNLNRRIKQHSN--KQGAKCLRNATNL--RLVYHSASAY 363
N W +Y++ G+LYTGIT+ RRI QH K GAK L+ + L R V+ A+
Sbjct: 21 NTQWYLYLIENKLGQLYTGITTEPKRRIAQHRGELKGGAKALKGKSPLVFRAVFEVANKS 80
Query: 364 DYKTAARMEYNLKR 405
+ A+++EY +K+
Sbjct: 81 E---ASKLEYAVKK 91
>UniRef50_Q8V5S5 Cluster: ORF74; n=3; Nucleopolyhedrovirus|Rep:
ORF74 - Helicoverpa zea SNPV
Length = 110
Score = 46.4 bits (105), Expect = 7e-04
Identities = 19/27 (70%), Positives = 25/27 (92%)
Frame = +3
Query: 492 MNLDVPYYRLGNHEKVEYIPLKLALND 572
MNLD+PY RLG ++KV+YIPLKLA++D
Sbjct: 1 MNLDIPYDRLGVNDKVDYIPLKLAISD 27
>UniRef50_Q0N429 Cluster: Ac78-like protein; n=1; Clanis bilineata
nucleopolyhedrosis virus|Rep: Ac78-like protein - Clanis
bilineata nucleopolyhedrosis virus
Length = 114
Score = 46.4 bits (105), Expect = 7e-04
Identities = 20/27 (74%), Positives = 23/27 (85%)
Frame = +3
Query: 492 MNLDVPYYRLGNHEKVEYIPLKLALND 572
MNL++PY RL + KVEYIPLKLALND
Sbjct: 1 MNLEIPYERLSDKTKVEYIPLKLALND 27
>UniRef50_A0EYW5 Cluster: Putative uncharacterized protein; n=1;
Ecotropis obliqua NPV|Rep: Putative uncharacterized
protein - Ecotropis obliqua NPV
Length = 110
Score = 46.4 bits (105), Expect = 7e-04
Identities = 31/80 (38%), Positives = 43/80 (53%), Gaps = 5/80 (6%)
Frame = +3
Query: 492 MNLDVPYYRLGNHEKVEYIPLKLALNDDITSEPQQFSEPVYKMPIDDMMVGYNNTTS--- 662
M+ ++PY RLG V+YIPLKLALND S+ S D+ + YNN TS
Sbjct: 1 MSFEIPYERLGVKNIVDYIPLKLALNDTDESKNYSASNSAAGAKNDNDNLFYNNITSGRG 60
Query: 663 NVSAGI--IILISVVAFIAL 716
N G IILI++++ +
Sbjct: 61 NEQRGSEHIILITLLSIFCI 80
>UniRef50_UPI0000E0E642 Cluster: hypothetical protein OM2255_20122;
n=1; alpha proteobacterium HTCC2255|Rep: hypothetical
protein OM2255_20122 - alpha proteobacterium HTCC2255
Length = 100
Score = 46.0 bits (104), Expect = 0.001
Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Frame = +1
Query: 202 VWCVYILRQDNGKLYTGITSNLNRRIKQHS--NKQGAKCLRNATNLRLVYHSASAYDYKT 375
+W VYI+ G YTG+T ++ RR +HS +GAK L+ L L+ + D +T
Sbjct: 4 IWSVYIIENKLGHWYTGVTVDVARRFAEHSAGGVKGAKALKGKGPLTLI-SAYDCPDKQT 62
Query: 376 AARMEYNLKRK 408
A ++EY +K++
Sbjct: 63 AYQLEYWIKQQ 73
>UniRef50_Q91BF0 Cluster: Putative uncharacterized protein; n=1;
Spodoptera litura NPV|Rep: Putative uncharacterized
protein - Spodoptera litura multicapsid
nucleopolyhedrovirus (SpltMNPV)
Length = 120
Score = 46.0 bits (104), Expect = 0.001
Identities = 23/33 (69%), Positives = 27/33 (81%), Gaps = 1/33 (3%)
Frame = +3
Query: 492 MNLDVPYYRLG-NHEKVEYIPLKLALNDDITSE 587
MNLDVPY RLG +EKVEYIPLKLA+N + S+
Sbjct: 1 MNLDVPYDRLGITNEKVEYIPLKLAINVNSDSD 33
>UniRef50_Q5QZJ7 Cluster: Predicted endonuclease containing a URI
domain; n=2; Alteromonadales|Rep: Predicted endonuclease
containing a URI domain - Idiomarina loihiensis
Length = 83
Score = 46.0 bits (104), Expect = 0.001
Identities = 23/69 (33%), Positives = 41/69 (59%), Gaps = 2/69 (2%)
Frame = +1
Query: 205 WCVYILRQDNGKLYTGITSNLNRRIKQHS--NKQGAKCLRNATNLRLVYHSASAYDYKTA 378
W VY+++ + YTG+T+++ RR+ +H+ +K+GAK R + LV+ S + A
Sbjct: 3 WAVYLIKCADNTFYTGVTTDIERRVNEHNTDDKKGAKYTRARRPVALVW-SEEHPNRTKA 61
Query: 379 ARMEYNLKR 405
+ EY +KR
Sbjct: 62 CQREYEIKR 70
>UniRef50_A6BH73 Cluster: Putative uncharacterized protein; n=1;
Dorea longicatena DSM 13814|Rep: Putative
uncharacterized protein - Dorea longicatena DSM 13814
Length = 114
Score = 46.0 bits (104), Expect = 0.001
Identities = 24/68 (35%), Positives = 40/68 (58%)
Frame = +1
Query: 214 YILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSASAYDYKTAARMEY 393
YI++ + LYTG T++LN+RIK H++ +GAK + ++LVY+ + +R EY
Sbjct: 5 YIVKCADSTLYTGWTNDLNKRIKAHNSGKGAKYTKTRRPVKLVYYEEHETKNEAMSR-EY 63
Query: 394 NLKRKCSK 417
+K K
Sbjct: 64 AIKHLTRK 71
>UniRef50_Q62LB3 Cluster: Endo/excinuclease domain protein; n=20;
Betaproteobacteria|Rep: Endo/excinuclease domain protein
- Burkholderia mallei (Pseudomonas mallei)
Length = 298
Score = 45.2 bits (102), Expect = 0.002
Identities = 24/67 (35%), Positives = 38/67 (56%)
Frame = +1
Query: 205 WCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSASAYDYKTAAR 384
W +Y++ +G +YTGIT+++ R +H+ GA+ R A R V S D +A+R
Sbjct: 3 WYLYLIECADGSVYTGITTDVAARFDKHAQGAGARYTR-ARKPRAVLASFELADRSSASR 61
Query: 385 MEYNLKR 405
EY +KR
Sbjct: 62 AEYWVKR 68
>UniRef50_A4B9D9 Cluster: Excinuclease ABC, C subunit-like protein;
n=1; Reinekea sp. MED297|Rep: Excinuclease ABC, C
subunit-like protein - Reinekea sp. MED297
Length = 94
Score = 45.2 bits (102), Expect = 0.002
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Frame = +1
Query: 205 WCVYILRQDNGKLYTGITSNLNRRIKQHSNK--QGAKCLRNATNLRLVYHSASAYDYKTA 378
W VY ++ +G YTGIT++ +RR++QH+ + GA+ + + LV++ A
Sbjct: 9 WWVYFVQCADGTFYTGITTDPHRRLRQHNGELVGGARYTASRRPVTLVFYEPHP-SRSDA 67
Query: 379 ARMEYNLKRKCSKYFKLRLI 438
AR EY L RK S+ KL I
Sbjct: 68 ARAEYRL-RKLSRKQKLARI 86
>UniRef50_A1FNL2 Cluster: Excinuclease ABC, C subunit-like; n=4;
Pseudomonadaceae|Rep: Excinuclease ABC, C subunit-like -
Pseudomonas putida W619
Length = 94
Score = 45.2 bits (102), Expect = 0.002
Identities = 27/80 (33%), Positives = 38/80 (47%)
Frame = +1
Query: 199 KVWCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSASAYDYKTA 378
K W VY++R NG LY GI+ + RR H QGA+ + + LVY + K
Sbjct: 11 KPWYVYLVRAANGSLYCGISDDPQRRFVAHQKGQGARYFKTSPAQALVY--VEQWPDKGE 68
Query: 379 ARMEYNLKRKCSKYFKLRLI 438
A + L +K K K L+
Sbjct: 69 ALRQERLVKKLRKAAKEALV 88
>UniRef50_Q3CK93 Cluster: Excinuclease ABC, C subunit, N-terminal;
n=1; Thermoanaerobacter ethanolicus ATCC 33223|Rep:
Excinuclease ABC, C subunit, N-terminal -
Thermoanaerobacter ethanolicus ATCC 33223
Length = 107
Score = 44.8 bits (101), Expect = 0.002
Identities = 28/73 (38%), Positives = 38/73 (52%)
Frame = +1
Query: 187 LYTNKVWCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSASAYD 366
L K++ VY+L + GK+Y G TSN+ R H K+ K R RLVY+ A D
Sbjct: 18 LEEGKMYYVYVLANEKGKIYIGYTSNIKERYLAHQRKE-VKSTREG-KWRLVYYEAYR-D 74
Query: 367 YKTAARMEYNLKR 405
K A E +LK+
Sbjct: 75 KKDALIREKHLKK 87
>UniRef50_Q9J856 Cluster: ORF81; n=2; Nucleopolyhedrovirus|Rep:
ORF81 - Spodoptera exigua MNPV
Length = 127
Score = 44.4 bits (100), Expect = 0.003
Identities = 20/27 (74%), Positives = 22/27 (81%)
Frame = +3
Query: 492 MNLDVPYYRLGNHEKVEYIPLKLALND 572
M+LDVPY RLG KV+YIPLKLAL D
Sbjct: 1 MSLDVPYERLGTATKVDYIPLKLALTD 27
>UniRef50_Q15PT6 Cluster: Excinuclease ABC, C subunit-like; n=1;
Pseudoalteromonas atlantica T6c|Rep: Excinuclease ABC, C
subunit-like - Pseudoalteromonas atlantica (strain T6c /
BAA-1087)
Length = 159
Score = 44.4 bits (100), Expect = 0.003
Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Frame = +1
Query: 205 WCVYILRQDNGKLYTGITSNLNRRIKQH--SNKQGAKCLRNATNLRLVYHSASAYDYKTA 378
W +YI+ YTGI +L++R QH S + AK LR L+++Y + D+ A
Sbjct: 59 WFLYIIENKYQHYYTGICKDLSKRFAQHNSSGRLCAKALRGKGPLKMIY-AVELVDHSDA 117
Query: 379 ARMEYNLKRKCSKYFKLRLI 438
+ME +K K +K K++L+
Sbjct: 118 LKMELWVK-KLTKAKKVQLV 136
>UniRef50_Q8P698 Cluster: UPF0213 protein XCC3072; n=7;
Proteobacteria|Rep: UPF0213 protein XCC3072 -
Xanthomonas campestris pv. campestris
Length = 102
Score = 44.4 bits (100), Expect = 0.003
Identities = 27/70 (38%), Positives = 38/70 (54%)
Frame = +1
Query: 199 KVWCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSASAYDYKTA 378
K W +Y+L NG Y GIT++L RR + H GA+ R L+ V S D TA
Sbjct: 5 KPWHLYLLLCRNGSYYAGITNDLERRFQAHLRGTGARYTRANPPLQ-VLASHPYPDRATA 63
Query: 379 ARMEYNLKRK 408
+R E+ LK++
Sbjct: 64 SRAEWLLKQQ 73
>UniRef50_Q1QV31 Cluster: Excinuclease ABC, C subunit-like protein;
n=1; Chromohalobacter salexigens DSM 3043|Rep:
Excinuclease ABC, C subunit-like protein -
Chromohalobacter salexigens (strain DSM 3043 / ATCC
BAA-138 / NCIMB13768)
Length = 99
Score = 44.0 bits (99), Expect = 0.004
Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Frame = +1
Query: 205 WCVYILRQDNGKLYTGITSNLNRRIKQH-SNKQGAKCLRNATNLRLVYHSASAYDYKTAA 381
W +Y++ G LYTG+T+++ RR ++H K+GA+ LR L L H+ + A
Sbjct: 13 WYLYLVETAAGALYTGVTTDVARRFREHRDGKRGARALRGKGPLTL-RHAEYVGGHGEAL 71
Query: 382 RMEYNLKR 405
R E LK+
Sbjct: 72 RQEAALKK 79
>UniRef50_Q4L3E5 Cluster: UPF0213 protein SH2523; n=25; cellular
organisms|Rep: UPF0213 protein SH2523 - Staphylococcus
haemolyticus (strain JCSC1435)
Length = 82
Score = 44.0 bits (99), Expect = 0.004
Identities = 27/76 (35%), Positives = 41/76 (53%)
Frame = +1
Query: 211 VYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSASAYDYKTAARME 390
VYI++ + LYTG T+N+ RI H+ +GAK + + LVY + A R E
Sbjct: 6 VYIVKCKDNSLYTGYTTNVEARIATHNAGKGAKYTKTRRPVVLVYQEMFS-SKSEAMRRE 64
Query: 391 YNLKRKCSKYFKLRLI 438
Y +K S+ KL++I
Sbjct: 65 YEIK-TFSRQQKLKMI 79
>UniRef50_A6T193 Cluster: Uncharacterized conserved protein; n=1;
Janthinobacterium sp. Marseille|Rep: Uncharacterized
conserved protein - Janthinobacterium sp. (strain
Marseille) (Minibacterium massiliensis)
Length = 130
Score = 43.6 bits (98), Expect = 0.005
Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Frame = +1
Query: 172 IMATTLYTNKVWCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHS 351
+ ++ + W +Y+L NG +YTGI ++ R K H +GA+ R+ RL+ +
Sbjct: 20 VQKLSILSAMTWFLYLLECRNGSIYTGIAVDVQARYKAHMAGKGARYTRSNPPRRLL--A 77
Query: 352 ASAY-DYKTAARMEYNLKR 405
Y D +A++ EY +KR
Sbjct: 78 VLEYPDRSSASKAEYAMKR 96
>UniRef50_Q8E0F5 Cluster: UPF0213 protein SAG0778; n=8;
Streptococcus agalactiae|Rep: UPF0213 protein SAG0778 -
Streptococcus agalactiae serotype V
Length = 88
Score = 43.6 bits (98), Expect = 0.005
Identities = 24/76 (31%), Positives = 43/76 (56%)
Frame = +1
Query: 211 VYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSASAYDYKTAARME 390
+Y+L +G LYTG T+++ RR+ H+ +GAK R ++L+Y + A++ K A
Sbjct: 8 MYVLECSDGTLYTGYTTDVKRRLNTHNTGKGAKYTRARLPVKLLY--SEAFNSKQEAMRA 65
Query: 391 YNLKRKCSKYFKLRLI 438
L ++ ++ KL I
Sbjct: 66 EALFKQKTRQAKLTYI 81
>UniRef50_Q88VJ1 Cluster: UPF0213 protein lp_2058; n=6;
Lactobacillus|Rep: UPF0213 protein lp_2058 -
Lactobacillus plantarum
Length = 101
Score = 43.6 bits (98), Expect = 0.005
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Frame = +1
Query: 199 KVWCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKC--LRNATNLRLVYHSASAYDYK 372
K + Y+L + LY G T NL RR+ H+ +GAK +R+ L+L+YH D
Sbjct: 15 KKYYFYVLLCADQTLYGGFTDNLQRRLATHNAGKGAKYTRVRSRRPLQLIYHETFT-DKS 73
Query: 373 TAARMEYNLKRKCSKYFKLRLI 438
+A + EY K + S+ KL+ +
Sbjct: 74 SALKAEYAFKHQ-SRAAKLKYL 94
>UniRef50_Q91EZ0 Cluster: ORF65 similar to AcMNPV ORF79; n=1; Cydia
pomonella granulovirus|Rep: ORF65 similar to AcMNPV
ORF79 - Cydia pomonella granulosis virus (CpGV) (Cydia
pomonellagranulovirus)
Length = 79
Score = 43.2 bits (97), Expect = 0.007
Identities = 16/35 (45%), Positives = 26/35 (74%)
Frame = +1
Query: 205 WCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAK 309
WCVY++R +G LYTG+++N++RR H +GA+
Sbjct: 7 WCVYMVRTPDGALYTGMSNNVHRRFVTHCIGRGAR 41
>UniRef50_A0EYW6 Cluster: Gp41; n=1; Ecotropis obliqua NPV|Rep: Gp41
- Ecotropis obliqua NPV
Length = 338
Score = 43.2 bits (97), Expect = 0.007
Identities = 18/25 (72%), Positives = 22/25 (88%)
Frame = +2
Query: 29 SLTELAFQNETLRRFIFQQINYNKD 103
SLTE+AFQNE LRRFIFQQ++Y +
Sbjct: 308 SLTEMAFQNEALRRFIFQQLSYKNN 332
>UniRef50_Q0IKZ8 Cluster: ORF121; n=1; Leucania separata nuclear
polyhedrosis virus|Rep: ORF121 - Leucania separata
nuclear polyhedrosis virus (LsNPV)
Length = 159
Score = 42.7 bits (96), Expect = 0.009
Identities = 25/80 (31%), Positives = 45/80 (56%)
Frame = +1
Query: 199 KVWCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSASAYDYKTA 378
+++ +YI+R LYTG+++N+ RR++QH + + + L LVY S A
Sbjct: 57 RLYALYIIRTSKNTLYTGVSTNVVRRLQQHRSGRASLNGGGKGPLLLVYQSEYFMCASCA 116
Query: 379 ARMEYNLKRKCSKYFKLRLI 438
R+E +KR+ S+ K ++I
Sbjct: 117 IRLEKLVKRQ-SRLVKEQMI 135
>UniRef50_Q30TF2 Cluster: Excinuclease ABC, C subunit-like; n=2;
Proteobacteria|Rep: Excinuclease ABC, C subunit-like -
Thiomicrospira denitrificans (strain ATCC 33889 / DSM
1351)
Length = 79
Score = 42.7 bits (96), Expect = 0.009
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Frame = +1
Query: 217 ILRQDNGKLYTGITSNLNRRIKQH-SNKQGAKCLRNATNLRLVYHSASAYDYKTAARMEY 393
+L+ + LYTGIT +L+RR+ +H S+++ AK R L ++Y D +A++ E
Sbjct: 1 MLKCSDDTLYTGITIDLSRRLNEHNSSQKAAKYTRTRRPLEMIYFEEHK-DKSSASKREL 59
Query: 394 NLKRKCSKYFKLRLI 438
+K K S+ KL LI
Sbjct: 60 EIK-KLSRDKKLELI 73
>UniRef50_A4J4G2 Cluster: Excinuclease ABC, C subunit domain
protein; n=3; Clostridiales|Rep: Excinuclease ABC, C
subunit domain protein - Desulfotomaculum reducens MI-1
Length = 88
Score = 42.7 bits (96), Expect = 0.009
Identities = 28/78 (35%), Positives = 43/78 (55%)
Frame = +1
Query: 205 WCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSASAYDYKTAAR 384
+ VYIL+ + LYTGIT++L RR++QH + +K R ++LVY Y A
Sbjct: 5 YVVYILKCSDSTLYTGITNDLKRRLQQHLLGKASKYTRCRLPVQLVYIEGE-YTKGQALT 63
Query: 385 MEYNLKRKCSKYFKLRLI 438
E +K K ++ K+ LI
Sbjct: 64 RELAIK-KLNRQQKMDLI 80
>UniRef50_Q80LN4 Cluster: Putative uncharacterized protein; n=1;
Adoxophyes honmai NPV|Rep: Putative uncharacterized
protein - Adoxophyes honmai nucleopolyhedrovirus
Length = 107
Score = 42.3 bits (95), Expect = 0.011
Identities = 17/27 (62%), Positives = 23/27 (85%)
Frame = +3
Query: 492 MNLDVPYYRLGNHEKVEYIPLKLALND 572
MN D+PY +L ++ KV+YIPLKLAL+D
Sbjct: 1 MNFDIPYDKLSSNAKVDYIPLKLALSD 27
>UniRef50_Q7NMN4 Cluster: Gll0731 protein; n=1; Gloeobacter
violaceus|Rep: Gll0731 protein - Gloeobacter violaceus
Length = 118
Score = 42.3 bits (95), Expect = 0.011
Identities = 25/65 (38%), Positives = 38/65 (58%)
Frame = +1
Query: 211 VYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSASAYDYKTAARME 390
VY++R NG LY G T++L R++ H++ +GA+ +R A RL S D A R+E
Sbjct: 5 VYLVRCRNGALYCGQTADLEARLRLHASGKGARSVRMAGFDRLA-ASWPVADRSAALRLE 63
Query: 391 YNLKR 405
+KR
Sbjct: 64 AAIKR 68
>UniRef50_Q2S0D1 Cluster: GIY-YIG catalytic domain, putative; n=3;
cellular organisms|Rep: GIY-YIG catalytic domain,
putative - Salinibacter ruber (strain DSM 13855)
Length = 100
Score = 42.3 bits (95), Expect = 0.011
Identities = 22/66 (33%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Frame = +1
Query: 211 VYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSASAYDYKTAA-RM 387
VY++ +G YTG T+++ RR+++H+ AK R + LV+ YD ++AA +
Sbjct: 17 VYVIECRDGTYYTGYTTDVERRVEEHNEGTAAKYTRGRRPVTLVH--VETYDSQSAAMQR 74
Query: 388 EYNLKR 405
EY +K+
Sbjct: 75 EYAIKQ 80
>UniRef50_Q1LH87 Cluster: Excinuclease ABC, C subunit-like protein;
n=1; Ralstonia metallidurans CH34|Rep: Excinuclease ABC,
C subunit-like protein - Ralstonia metallidurans (strain
CH34 / ATCC 43123 / DSM 2839)
Length = 98
Score = 42.3 bits (95), Expect = 0.011
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = +1
Query: 205 WCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLV 342
W +Y+L + +YTGIT+++ RR QH GAK R+ LRL+
Sbjct: 15 WFLYLLECEGESIYTGITTDVQRRYAQHRAGTGAKYTRSRRPLRLL 60
>UniRef50_Q39DX9 Cluster: Excinuclease ABC, C subunit-like; n=9;
Burkholderiaceae|Rep: Excinuclease ABC, C subunit-like -
Burkholderia sp. (strain 383) (Burkholderia cepacia
(strain ATCC 17760/ NCIB 9086 / R18194))
Length = 289
Score = 41.9 bits (94), Expect = 0.015
Identities = 22/67 (32%), Positives = 39/67 (58%)
Frame = +1
Query: 205 WCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSASAYDYKTAAR 384
W +Y++ + +YTGIT+++ R +H++ +GA+ R + R V S D +A+R
Sbjct: 3 WFLYLIECADDSVYTGITTDVAARFDEHASGKGARYTR-SRKPRAVLASFPLPDRSSASR 61
Query: 385 MEYNLKR 405
EY +KR
Sbjct: 62 AEYWVKR 68
>UniRef50_A4JGU7 Cluster: Excinuclease ABC, C subunit domain
protein; n=1; Burkholderia vietnamiensis G4|Rep:
Excinuclease ABC, C subunit domain protein -
Burkholderia vietnamiensis (strain G4 / LMG 22486)
(Burkholderiacepacia (strain R1808))
Length = 261
Score = 41.9 bits (94), Expect = 0.015
Identities = 22/67 (32%), Positives = 39/67 (58%)
Frame = +1
Query: 205 WCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSASAYDYKTAAR 384
W +Y++ + +YTGIT+++ R +H++ +GA+ R + R V S D +A+R
Sbjct: 3 WFLYLIECADDSVYTGITTDVAARFDEHASGKGARYTR-SRKPRAVLASFPLPDRSSASR 61
Query: 385 MEYNLKR 405
EY +KR
Sbjct: 62 AEYWVKR 68
>UniRef50_Q461Z4 Cluster: Orf71; n=2; Nucleopolyhedrovirus|Rep:
Orf71 - Trichoplusia ni SNPV
Length = 125
Score = 41.5 bits (93), Expect = 0.020
Identities = 19/28 (67%), Positives = 24/28 (85%), Gaps = 1/28 (3%)
Frame = +3
Query: 492 MNLDVPYYRLG-NHEKVEYIPLKLALND 572
M+L+VPY R+ N +KVEYIPLKLA+ND
Sbjct: 1 MSLEVPYERMSLNQKKVEYIPLKLAVND 28
>UniRef50_Q598P4 Cluster: ORF104; n=5; Nucleopolyhedrovirus|Rep:
ORF104 - Mamestra configurata NPV-B
Length = 151
Score = 40.3 bits (90), Expect = 0.046
Identities = 19/36 (52%), Positives = 25/36 (69%)
Frame = +3
Query: 465 ISVSK*VVNMNLDVPYYRLGNHEKVEYIPLKLALND 572
I+++ M+LD+PY RL V+YIPLKLALND
Sbjct: 31 INITIAAATMSLDIPYERLSPTLTVKYIPLKLALND 66
>UniRef50_A7NLC7 Cluster: Excinuclease ABC C subunit domain protein;
n=14; Bacteria|Rep: Excinuclease ABC C subunit domain
protein - Roseiflexus castenholzii DSM 13941
Length = 107
Score = 40.3 bits (90), Expect = 0.046
Identities = 27/74 (36%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = +1
Query: 211 VYILRQDNGK-LYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSASAYDYKTAARM 387
VYIL N K +Y G+T+NL RRI +H NK + +LVY+ + Y AR
Sbjct: 8 VYILTNWNNKVMYIGMTNNLERRIYEHKNKMVDGFTKKYNVNKLVYYEHTTDVYAAIARE 67
Query: 388 EYNLKRKCSKYFKL 429
+ K + K KL
Sbjct: 68 KEIKKWRREKKNKL 81
>UniRef50_A4G800 Cluster: Putative uncharacterized protein; n=3;
Burkholderiales|Rep: Putative uncharacterized protein -
Herminiimonas arsenicoxydans
Length = 100
Score = 40.3 bits (90), Expect = 0.046
Identities = 22/67 (32%), Positives = 35/67 (52%)
Frame = +1
Query: 205 WCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSASAYDYKTAAR 384
W +Y+L +G +YTGI ++ R H +GA+ R+ RL+ A D A++
Sbjct: 3 WFLYLLECRDGSIYTGIAVDVAARYAAHEKGKGARYTRSHPPRRLLAVIEYA-DRSAASK 61
Query: 385 MEYNLKR 405
EY +KR
Sbjct: 62 AEYEMKR 68
>UniRef50_Q81W06 Cluster: UPF0213 protein BA_0032/GBAA0032/BAS0034;
n=9; Bacillus|Rep: UPF0213 protein
BA_0032/GBAA0032/BAS0034 - Bacillus anthracis
Length = 96
Score = 40.3 bits (90), Expect = 0.046
Identities = 21/66 (31%), Positives = 35/66 (53%)
Frame = +1
Query: 208 CVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSASAYDYKTAARM 387
C Y++ +G Y G T+++ +RI H++ +GAK R + L Y D +TA +
Sbjct: 7 CFYVVECSDGSYYAGYTNHIEKRIGTHNSGRGAKYTRARLPVVLKYVEFHE-DKRTAMQA 65
Query: 388 EYNLKR 405
EY K+
Sbjct: 66 EYYFKQ 71
>UniRef50_A5FNC4 Cluster: Excinuclease ABC, C subunit domain
protein; n=5; Flavobacteriales|Rep: Excinuclease ABC, C
subunit domain protein - Flavobacterium johnsoniae UW101
Length = 107
Score = 39.9 bits (89), Expect = 0.061
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Frame = +1
Query: 199 KVWCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLR-NATNLRLVYHSASAYDYKT 375
K + VYIL+ + YTG T+N+ RR+ +H++ +C N L LV++ A D
Sbjct: 2 KRYYVYILKCSDNSYYTGFTNNIERRLNEHNSGINKECYTFNKRPLELVFY-AEFNDVHQ 60
Query: 376 AARMEYNLK 402
A E +K
Sbjct: 61 AIAFEKQVK 69
>UniRef50_Q97PR7 Cluster: UPF0213 protein SP_1535; n=73;
Bacilli|Rep: UPF0213 protein SP_1535 - Streptococcus
pneumoniae
Length = 99
Score = 39.5 bits (88), Expect = 0.081
Identities = 22/66 (33%), Positives = 36/66 (54%)
Frame = +1
Query: 211 VYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSASAYDYKTAARME 390
+Y+L +G Y G T+++ RR+ H++ +GAK R ++L+Y A + A E
Sbjct: 7 MYVLECRDGSYYIGYTTDMRRRLAIHNSGKGAKYTRARLPVKLIYAQGFA-SKEEAMSAE 65
Query: 391 YNLKRK 408
LKRK
Sbjct: 66 ALLKRK 71
>UniRef50_Q4UMD7 Cluster: Excinuclease ABC, C subunit, N-terminal;
n=7; Proteobacteria|Rep: Excinuclease ABC, C subunit,
N-terminal - Rickettsia felis (Rickettsia azadi)
Length = 90
Score = 39.1 bits (87), Expect = 0.11
Identities = 25/78 (32%), Positives = 38/78 (48%)
Frame = +1
Query: 205 WCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSASAYDYKTAAR 384
W + +G LY GIT+N+ RR +H K K + N+ + ++ D K A
Sbjct: 3 WVYILCSNKHGTLYIGITNNIIRRAYEHKQKI-IKGFTSKYNIIKLVYTEEFTDIKEALT 61
Query: 385 MEYNLKRKCSKYFKLRLI 438
E NLK K + +K+ LI
Sbjct: 62 REKNLK-KWKRNWKIELI 78
>UniRef50_A6GJZ6 Cluster: Excinuclease ABC, C subunit-like protein;
n=1; Plesiocystis pacifica SIR-1|Rep: Excinuclease ABC,
C subunit-like protein - Plesiocystis pacifica SIR-1
Length = 95
Score = 39.1 bits (87), Expect = 0.11
Identities = 18/40 (45%), Positives = 26/40 (65%), Gaps = 2/40 (5%)
Frame = +1
Query: 205 WCVYILRQDNGKLYTGITSNLNRRIKQHSNK--QGAKCLR 318
W +Y+LR +G+ Y GIT +L RR+ QH+ + GAK R
Sbjct: 20 WWLYLLRSASGRSYVGITVDLERRLAQHNGELPGGAKSTR 59
>UniRef50_Q9RHE8 Cluster: Putative uncharacterized protein; n=1;
papaya bunchy top disease rickettsia|Rep: Putative
uncharacterized protein - papaya bunchy top disease
rickettsia
Length = 109
Score = 38.3 bits (85), Expect = 0.19
Identities = 20/34 (58%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Frame = +1
Query: 199 KVWCVYILRQ-DNGKLYTGITSNLNRRIKQHSNK 297
K + VYIL NG LY GITSN+ RRI +H NK
Sbjct: 44 KQYYVYILASIRNGTLYIGITSNIIRRICEHKNK 77
>UniRef50_Q4AQ38 Cluster: Excinuclease ABC, C subunit, N-terminal;
n=1; Chlorobium phaeobacteroides BS1|Rep: Excinuclease
ABC, C subunit, N-terminal - Chlorobium phaeobacteroides
BS1
Length = 84
Score = 38.3 bits (85), Expect = 0.19
Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Frame = +1
Query: 202 VWCVYILRQDNGK-LYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSASAYDYKTA 378
++ VY+LR + Y G TS+L+RRI +H N+ +K + L LVY+ A
Sbjct: 1 MYYVYVLRSKKDEHYYIGYTSDLDRRIDEH-NQGFSKSTAHRRPLELVYYEACRSSKDAM 59
Query: 379 ARMEYNLKRKCSKYFKLRL 435
R +Y +Y K RL
Sbjct: 60 HREKYLKSTYGHRYLKNRL 78
>UniRef50_A1G1C7 Cluster: Excinuclease ABC, C subunit-like; n=2;
Proteobacteria|Rep: Excinuclease ABC, C subunit-like -
Stenotrophomonas maltophilia R551-3
Length = 174
Score = 38.3 bits (85), Expect = 0.19
Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Frame = +1
Query: 163 HCIIMATTLYTNKVWCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLV 342
H MA++L + W +Y+L +G Y GI+++++ R H +GA+ R LR++
Sbjct: 83 HNPAMASSL---RPWFLYLLECRDGSYYAGISTDVDARFAAHQAGKGARYTRARPPLRVL 139
Query: 343 YHSASAY-DYKTAARMEYNLKRK 408
+ Y D A+R E+ LK++
Sbjct: 140 --AVREYPDRAAASRAEWQLKQQ 160
>UniRef50_A0NJ82 Cluster: Methyltransferase; n=2; Oenococcus
oeni|Rep: Methyltransferase - Oenococcus oeni ATCC
BAA-1163
Length = 346
Score = 37.9 bits (84), Expect = 0.25
Identities = 21/55 (38%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Frame = +1
Query: 187 LYTNKVWCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATN--LRLVY 345
L+ NK + Y+++ + LY G + ++NRR H K+GAK R A L+LVY
Sbjct: 262 LHDNKYF-FYVIQTADNYLYAGTSDDVNRRFATHQAKKGAKFTRAAIRHPLKLVY 315
>UniRef50_Q51440 Cluster: UPF0213 protein in ldhD 5'region; n=3;
Lactobacillales|Rep: UPF0213 protein in ldhD 5'region -
Pediococcus acidilactici
Length = 98
Score = 37.9 bits (84), Expect = 0.25
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Frame = +1
Query: 214 YILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLR--NATNLRLVYHSASAYDYKTAARM 387
Y+L + LYTG T NL +R+ +H++ QGAK R ++L+Y+ S + A
Sbjct: 12 YVLWCADQTLYTGYTVNLKQRVARHNSGQGAKYTRVPKRRPVQLLYYE-SFENQHDAMSA 70
Query: 388 EYNLKRKCSK 417
EY K++ K
Sbjct: 71 EYFFKKQSRK 80
>UniRef50_UPI00003839BD Cluster: COG2827: Predicted endonuclease
containing a URI domain; n=1; Magnetospirillum
magnetotacticum MS-1|Rep: COG2827: Predicted
endonuclease containing a URI domain - Magnetospirillum
magnetotacticum MS-1
Length = 82
Score = 37.5 bits (83), Expect = 0.33
Identities = 23/69 (33%), Positives = 32/69 (46%)
Frame = +1
Query: 199 KVWCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSASAYDYKTA 378
K W VY+L YTGI ++ R+ +H+ +GAK R RL H + A
Sbjct: 2 KDWFVYVLLNGAHIAYTGIALDVEDRLARHNAGEGAKFTRGRGPWRLA-HVEGPLSHGDA 60
Query: 379 ARMEYNLKR 405
R E +KR
Sbjct: 61 LRREMAIKR 69
>UniRef50_Q0VNB7 Cluster: Putative uncharacterized protein; n=1;
Alcanivorax borkumensis SK2|Rep: Putative
uncharacterized protein - Alcanivorax borkumensis
(strain SK2 / ATCC 700651 / DSM 11573)
Length = 129
Score = 37.5 bits (83), Expect = 0.33
Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Frame = +1
Query: 193 TNKVWCVYILRQDNGKLYTGITSNLNRRIKQHSNK-QGAKCLRNATNLRLVYHSASAYDY 369
T + W +Y+L + LYTGI++ RR+ +H+ +GA+ R +R V A D
Sbjct: 22 TMQQWWLYMLECADRSLYTGISTEPARRVHEHNTSLKGARYTRARRPVRPVL-LLPAGDR 80
Query: 370 KTAARMEYNLKRKCSKYFKLRLI 438
+A+++E +KR + +L L+
Sbjct: 81 ASASQLEARIKRLSRRDKQLLLV 103
>UniRef50_A3WNM7 Cluster: Predicted endonuclease containing a URI
domain; n=1; Idiomarina baltica OS145|Rep: Predicted
endonuclease containing a URI domain - Idiomarina
baltica OS145
Length = 101
Score = 37.5 bits (83), Expect = 0.33
Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Frame = +1
Query: 205 WCVYILRQDNGKLYTGITSNLNRRIKQHSNK--QGAKCLRNATNLRLVYHSASAYDYKTA 378
W VY++ + LYTG+T+ L RRI+QH+ + GA+ ++ + L + + A
Sbjct: 22 WYVYMVECGDRSLYTGVTTCLERRIRQHNGELSGGARYTQSRRPVVLSWRQ-GPFSKTRA 80
Query: 379 ARMEYNLKRKCSKYFKLRLI 438
++E LK + S+ K +LI
Sbjct: 81 CQLEAQLK-QLSRADKRKLI 99
>UniRef50_Q193D5 Cluster: Excinuclease ABC, C subunit-like; n=2;
Desulfitobacterium hafniense|Rep: Excinuclease ABC, C
subunit-like - Desulfitobacterium hafniense (strain
DCB-2)
Length = 103
Score = 37.1 bits (82), Expect = 0.43
Identities = 18/39 (46%), Positives = 24/39 (61%)
Frame = +1
Query: 202 VWCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLR 318
++ VYIL + LYTG T L RRI++H+ GAK R
Sbjct: 1 MYWVYILHCADHTLYTGSTPRLERRIQEHNQGSGAKYTR 39
>UniRef50_Q0LV83 Cluster: Excinuclease ABC, C subunit-like; n=1;
Caulobacter sp. K31|Rep: Excinuclease ABC, C
subunit-like - Caulobacter sp. K31
Length = 122
Score = 37.1 bits (82), Expect = 0.43
Identities = 28/77 (36%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Frame = +1
Query: 211 VYILR-QDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSASAYDYKTAARM 387
VYIL + G LY G+TS+L+RR+ +H G+ R RLVY+ D A
Sbjct: 32 VYILASKPYGTLYIGVTSDLSRRVWEHREGLGSLFCRKYGVHRLVYYE-EFDDISLAIHR 90
Query: 388 EYNLKRKCSKYFKLRLI 438
E LK + +K+ LI
Sbjct: 91 EKRLKH-YPRRWKINLI 106
>UniRef50_Q0LU34 Cluster: Excinuclease ABC, C subunit-like; n=4;
Proteobacteria|Rep: Excinuclease ABC, C subunit-like -
Caulobacter sp. K31
Length = 106
Score = 37.1 bits (82), Expect = 0.43
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Frame = +1
Query: 211 VYILR-QDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSASAYDYKTAARM 387
VYI+ Q NG LY G T +L RR+ +H G++ R LV++ D + AA
Sbjct: 16 VYIVASQRNGTLYIGSTDDLQRRVWEHKEADGSRFTRKHGCTILVWYEVC--DTREAALT 73
Query: 388 EYNLKRKCSKYFKLRLI 438
++ + +KLR+I
Sbjct: 74 LERRMKEWKRRWKLRVI 90
>UniRef50_Q07QY7 Cluster: Excinuclease ABC, C subunit domain
protein; n=3; Rhizobiales|Rep: Excinuclease ABC, C
subunit domain protein - Rhodopseudomonas palustris
(strain BisA53)
Length = 95
Score = 37.1 bits (82), Expect = 0.43
Identities = 16/28 (57%), Positives = 21/28 (75%), Gaps = 1/28 (3%)
Frame = +1
Query: 208 CVYIL-RQDNGKLYTGITSNLNRRIKQH 288
CVYI+ + NG LYTG+TSN+ RR +H
Sbjct: 5 CVYIVANRRNGTLYTGVTSNMPRRAHEH 32
>UniRef50_Q4FLX0 Cluster: Excinuclease ABC; n=2; Candidatus
Pelagibacter ubique|Rep: Excinuclease ABC - Pelagibacter
ubique
Length = 83
Score = 36.7 bits (81), Expect = 0.57
Identities = 21/55 (38%), Positives = 29/55 (52%)
Frame = +1
Query: 238 KLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSASAYDYKTAARMEYNLK 402
K Y G T+NL R+ +H++ GAK + + L+Y S D K A EY LK
Sbjct: 17 KTYVGYTNNLELRLNKHNSNNGAKATKGYKWI-LIY-SKKFRDKKEAMSFEYKLK 69
>UniRef50_Q3STS6 Cluster: Excinuclease ABC, C subunit; n=3;
Rhizobiales|Rep: Excinuclease ABC, C subunit -
Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391)
Length = 110
Score = 36.7 bits (81), Expect = 0.57
Identities = 23/75 (30%), Positives = 41/75 (54%)
Frame = +1
Query: 214 YILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSASAYDYKTAARMEY 393
++ + NG LY G+T++L RR+ +H + A + RLVY + D + A + E+
Sbjct: 23 FLTNRPNGILYVGVTNDLVRRVFEHRSGFVAGFTKRHCLKRLVYFE-TFDDIRNAIQREH 81
Query: 394 NLKRKCSKYFKLRLI 438
N+K + +K+R I
Sbjct: 82 NIKH-WPRTWKVRTI 95
>UniRef50_Q9CEL6 Cluster: UPF0213 protein ysiG; n=3; Lactococcus
lactis|Rep: UPF0213 protein ysiG - Lactococcus lactis
subsp. lactis (Streptococcus lactis)
Length = 104
Score = 36.7 bits (81), Expect = 0.57
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Frame = +1
Query: 214 YILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSASAYDYKT-AARME 390
YIL+ + LY G T++L +R+ H++ +GAK + ++L+ ++ +D K A E
Sbjct: 7 YILQCSDKTLYCGYTTDLEKRLATHNSGKGAKYTKTRLPVKLL--ASVDFDNKNDAMSCE 64
Query: 391 YNLKRKCSKYFKLRLI 438
+ K K + KL LI
Sbjct: 65 WWFKHKLVRKQKLSLI 80
>UniRef50_O31414 Cluster: UPF0213 protein yazA; n=4; Bacillus|Rep:
UPF0213 protein yazA - Bacillus subtilis
Length = 99
Score = 36.7 bits (81), Expect = 0.57
Identities = 18/68 (26%), Positives = 38/68 (55%)
Frame = +1
Query: 214 YILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSASAYDYKTAARMEY 393
Y+++ + Y G T++L++R+K H++ +GAK + + L++ + S + A + EY
Sbjct: 9 YVVKCKDNSWYAGYTNDLHKRVKTHNDGKGAKYTKVRRPVELIF-AESFSTKREAMQAEY 67
Query: 394 NLKRKCSK 417
K+ K
Sbjct: 68 YFKKLTRK 75
>UniRef50_Q4UJM5 Cluster: Endo/excinuclease amino terminal domain
protein; n=17; Proteobacteria|Rep: Endo/excinuclease
amino terminal domain protein - Rickettsia felis
(Rickettsia azadi)
Length = 144
Score = 36.3 bits (80), Expect = 0.76
Identities = 17/29 (58%), Positives = 22/29 (75%), Gaps = 1/29 (3%)
Frame = +1
Query: 211 VYIL-RQDNGKLYTGITSNLNRRIKQHSN 294
VYI+ + NG LYTG+TSNL +RI +H N
Sbjct: 54 VYIVTNKKNGILYTGVTSNLIKRIYEHKN 82
>UniRef50_Q2G9S1 Cluster: Excinuclease ABC, C subunit-like protein;
n=2; Novosphingobium aromaticivorans DSM 12444|Rep:
Excinuclease ABC, C subunit-like protein -
Novosphingobium aromaticivorans (strain DSM 12444)
Length = 118
Score = 36.3 bits (80), Expect = 0.76
Identities = 23/78 (29%), Positives = 37/78 (47%)
Frame = +1
Query: 205 WCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSASAYDYKTAAR 384
W + + G +Y G+TS+L RR+ QH G+ + + RLVY A ++ A
Sbjct: 16 WVYIMANRYRGGMYVGVTSDLVRRVWQHREGVGSSHVDDFGKTRLVY--AERHEEIEPAI 73
Query: 385 MEYNLKRKCSKYFKLRLI 438
L +K + +K LI
Sbjct: 74 AREKLVKKWRREWKFALI 91
>UniRef50_Q1PYT5 Cluster: Predicted orf; n=1; Candidatus Kuenenia
stuttgartiensis|Rep: Predicted orf - Candidatus Kuenenia
stuttgartiensis
Length = 128
Score = 36.3 bits (80), Expect = 0.76
Identities = 15/36 (41%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Frame = +1
Query: 196 NKVWCVYIL-RQDNGKLYTGITSNLNRRIKQHSNKQ 300
+K++ +YI+ ++N LYTG+T+NL RR+ H K+
Sbjct: 50 DKLYSIYIMTNKNNTVLYTGVTNNLKRRVYWHREKR 85
>UniRef50_Q84LK0 Cluster: DNA mismatch repair protein; n=7; core
eudicotyledons|Rep: DNA mismatch repair protein -
Arabidopsis thaliana (Mouse-ear cress)
Length = 1118
Score = 36.3 bits (80), Expect = 0.76
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = +1
Query: 208 CVYILRQDNGKLYTGITSNLNRRIKQHSNKQG 303
CVY++R+ + +LY G T +L RI+ H K+G
Sbjct: 1026 CVYVMRRPDKRLYIGQTDDLEGRIRAHRAKEG 1057
>UniRef50_P95364 Cluster: UPF0213 protein in glnA 3'region; n=5;
Neisseria|Rep: UPF0213 protein in glnA 3'region -
Neisseria gonorrhoeae
Length = 91
Score = 36.3 bits (80), Expect = 0.76
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Frame = +1
Query: 205 WCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLR--NATNLRLVYHSASAYDYKTA 378
W VY++ +N Y GI+ N +R+ H+ +GAK R +R+V A D TA
Sbjct: 6 WSVYLILCENSAFYCGISPNPQQRLAIHTAGKGAKYTRVFKPVAMRIV---AGGMDKGTA 62
Query: 379 ARMEYNLKR 405
+ E +K+
Sbjct: 63 LKQEIAVKK 71
>UniRef50_Q9YMP0 Cluster: LdOrf-87 peptide; n=1; Lymantria dispar
MNPV|Rep: LdOrf-87 peptide - Lymantria dispar
multicapsid nuclear polyhedrosis virus (LdMNPV)
Length = 113
Score = 35.9 bits (79), Expect = 1.00
Identities = 18/28 (64%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
Frame = +3
Query: 495 NLDVPYYRLGNH-EKVEYIPLKLALNDD 575
+LDVPY +L KV YIPLKLAL DD
Sbjct: 9 SLDVPYEQLNERPSKVMYIPLKLALRDD 36
>UniRef50_Q2G9Y5 Cluster: Excinuclease ABC, C subunit-like protein;
n=3; Sphingomonadales|Rep: Excinuclease ABC, C
subunit-like protein - Novosphingobium aromaticivorans
(strain DSM 12444)
Length = 99
Score = 35.9 bits (79), Expect = 1.00
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = +1
Query: 211 VYILRQD-NGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVY 345
VYI+ G +Y G+TS+L RR+ QH N G+ + +RLV+
Sbjct: 10 VYIMADHYRGSMYVGVTSHLARRVFQHRNGTGSDYCARHSLVRLVW 55
>UniRef50_A1RI21 Cluster: Excinuclease ABC, C subunit domain
protein; n=8; Bacteria|Rep: Excinuclease ABC, C subunit
domain protein - Shewanella sp. (strain W3-18-1)
Length = 102
Score = 35.9 bits (79), Expect = 1.00
Identities = 29/77 (37%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Frame = +1
Query: 211 VYILR-QDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSASAYDYKTAARM 387
VYI+ Q NG LY G+TS L +R+ QH N +LVY A Y R
Sbjct: 5 VYIMASQFNGTLYIGVTSQLEQRVWQHKNAIIDGFTHKYKVDQLVYFEAHVSMYDAICR- 63
Query: 388 EYNLKRKCSKYFKLRLI 438
E LK K + +K+ LI
Sbjct: 64 EKQLK-KWRREWKIDLI 79
>UniRef50_Q6QXL5 Cluster: ORF95; n=9; Granulovirus|Rep: ORF95 -
Agrotis segetum granulosis virus (AsGV) (Agrotis
segetumgranulovirus)
Length = 309
Score = 35.5 bits (78), Expect = 1.3
Identities = 15/23 (65%), Positives = 19/23 (82%)
Frame = +2
Query: 23 QDSLTELAFQNETLRRFIFQQIN 91
Q+SLTELAF+NE LRR + Q +N
Sbjct: 280 QESLTELAFENEALRRGLIQDLN 302
>UniRef50_Q186F2 Cluster: Putative endonuclease; n=1; Clostridium
difficile 630|Rep: Putative endonuclease - Clostridium
difficile (strain 630)
Length = 103
Score = 35.5 bits (78), Expect = 1.3
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Frame = +1
Query: 202 VWCVYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRL-VYHSASAYDYKTA 378
++ YI+R + LYTG TSN+ RR+ +H +K R +L VY + A
Sbjct: 1 MYFTYIIRCKDDSLYTGYTSNIVRRMNEHKLGINSKYTRAKGFEKLEVYFVTNT--KSNA 58
Query: 379 ARMEYNLKRKCSKYFKLRLI 438
++EY +K K ++ KL +I
Sbjct: 59 MKLEYYIK-KLTRNKKLSII 77
>UniRef50_Q5UPY6 Cluster: Uncharacterized protein L300; n=1;
Acanthamoeba polyphaga mimivirus|Rep: Uncharacterized
protein L300 - Mimivirus
Length = 166
Score = 35.5 bits (78), Expect = 1.3
Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 5/82 (6%)
Frame = +1
Query: 208 CVYILRQDNGKLYTGITSNLNRRIKQHSN----KQGAKCLRNATNLRLVYHSASAYDYKT 375
C I+ D+ + Y G T+N RR+ H+N ++GAK R T + ++Y S ++ K
Sbjct: 6 CYLIMSLDSKETYIGSTNNRQRRLNDHNNLNPSRKGAKRTRGRTWIPILY--ISGFENKN 63
Query: 376 AA-RMEYNLKRKCSKYFKLRLI 438
A E KR K RL+
Sbjct: 64 ACLSFESGWKRLSKKRNIQRLL 85
>UniRef50_Q8DE33 Cluster: Predicted endonuclease; n=7;
Proteobacteria|Rep: Predicted endonuclease - Vibrio
vulnificus
Length = 94
Score = 34.7 bits (76), Expect = 2.3
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Frame = +1
Query: 211 VYILR-QDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSASAYDYKTAARM 387
+YIL Q G LY G+T +L +RI QH N + + + LVY ++ + A +
Sbjct: 1 MYILASQPYGTLYIGVTGDLIKRIWQHKNGESDGFTKKYRVVHLVYF--EQFEAMSDAIL 58
Query: 388 EYNLKRKCSKYFKLRLI 438
+K ++ +K++LI
Sbjct: 59 REKQLKKWNRQWKIQLI 75
>UniRef50_A5VJC3 Cluster: Excinuclease ABC, C subunit domain
protein; n=6; Lactobacillales|Rep: Excinuclease ABC, C
subunit domain protein - Lactobacillus reuteri F275
Length = 96
Score = 34.3 bits (75), Expect = 3.0
Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
Frame = +1
Query: 211 VYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLR--NATNLRLVYHSASAYDYKTAAR 384
+Y+L + Y G T+N+ RR H QGAK R L+L+Y S A
Sbjct: 8 IYVLYCADNSFYCGFTNNVKRRFHTHQTYQGAKYTRVKKRHPLKLIY-SEEFESKHDALS 66
Query: 385 MEYNLKRK 408
EY K +
Sbjct: 67 AEYYFKHQ 74
>UniRef50_A5FFT3 Cluster: Excinuclease ABC, C subunit domain
protein; n=8; Bacteria|Rep: Excinuclease ABC, C subunit
domain protein - Flavobacterium johnsoniae UW101
Length = 101
Score = 34.3 bits (75), Expect = 3.0
Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +1
Query: 241 LYTGITSNLNRRIKQHSNKQGAKCLRNATNLR-LVYH 348
+Y G+TSNL +RI +H NK+ K NL LVY+
Sbjct: 17 VYVGVTSNLPKRILEHKNKKYPKSFSAKYNLNILVYY 53
>UniRef50_Q8RIL3 Cluster: UPF0213 protein FN1575; n=3; Fusobacterium
nucleatum|Rep: UPF0213 protein FN1575 - Fusobacterium
nucleatum subsp. nucleatum
Length = 100
Score = 34.3 bits (75), Expect = 3.0
Identities = 12/33 (36%), Positives = 24/33 (72%)
Frame = +1
Query: 211 VYILRQDNGKLYTGITSNLNRRIKQHSNKQGAK 309
+Y+LR ++G +YTG+ + +R ++H + +GAK
Sbjct: 5 LYMLRCEDGSIYTGVAKDYLKRYEEHLSAKGAK 37
>UniRef50_Q5WYF4 Cluster: Putative uncharacterized protein; n=3;
Legionella pneumophila|Rep: Putative uncharacterized
protein - Legionella pneumophila (strain Lens)
Length = 93
Score = 33.9 bits (74), Expect = 4.0
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +1
Query: 211 VYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKC 312
VYIL+ + YTG T NL +R+ QH +K C
Sbjct: 4 VYILQCSDKSYYTGQTDNLEKRLTQHQDKMIPGC 37
>UniRef50_Q1GQY7 Cluster: Excinuclease ABC, C subunit-like protein;
n=1; Sphingopyxis alaskensis|Rep: Excinuclease ABC, C
subunit-like protein - Sphingopyxis alaskensis
(Sphingomonas alaskensis)
Length = 119
Score = 33.9 bits (74), Expect = 4.0
Identities = 23/69 (33%), Positives = 36/69 (52%)
Frame = +1
Query: 232 NGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSASAYDYKTAARMEYNLKRKC 411
NG LY G+TS+L R+ QH N+ + LV++ A D + A + E +K K
Sbjct: 37 NGTLYLGVTSDLLARVWQHRNEVVESFTKKYGCHTLVWYEAFD-DIQQARQRELQMK-KW 94
Query: 412 SKYFKLRLI 438
+ +K+ LI
Sbjct: 95 KRAWKIELI 103
>UniRef50_A3XQ90 Cluster: Endo/excinuclease amino terminal domain
protein; n=1; Leeuwenhoekiella blandensis MED217|Rep:
Endo/excinuclease amino terminal domain protein -
Leeuwenhoekiella blandensis MED217
Length = 94
Score = 33.9 bits (74), Expect = 4.0
Identities = 27/77 (35%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Frame = +1
Query: 211 VYILRQD-NGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSASAYDYKTAARM 387
VYIL Y G+TSNL +RI H K+G+ L+Y + D A
Sbjct: 6 VYILTNTYRTTFYIGVTSNLQQRIVDHKEKKGSAFTSKYNVCDLIYFEEFS-DIIQAISR 64
Query: 388 EYNLKRKCSKYFKLRLI 438
E LK K +KL LI
Sbjct: 65 EKQLK-NWKKDWKLNLI 80
>UniRef50_A3J1S6 Cluster: Predicted endonuclease containing a URI
domain; n=2; Flavobacteriales|Rep: Predicted
endonuclease containing a URI domain - Flavobacteria
bacterium BAL38
Length = 101
Score = 33.9 bits (74), Expect = 4.0
Identities = 13/31 (41%), Positives = 23/31 (74%)
Frame = +1
Query: 199 KVWCVYILRQDNGKLYTGITSNLNRRIKQHS 291
K++ VYIL+ + YTGIT+++ RR+ +H+
Sbjct: 2 KLFYVYILKCKDDSFYTGITNSIERRLYEHN 32
>UniRef50_A0W851 Cluster: Excinuclease ABC, C subunit-like; n=2;
Bacteria|Rep: Excinuclease ABC, C subunit-like -
Geobacter lovleyi SZ
Length = 151
Score = 33.9 bits (74), Expect = 4.0
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +1
Query: 211 VYILRQDNGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVY 345
+YIL +G YTG T NL +R+ +H GA+ ++L+Y
Sbjct: 4 MYILECADGSYYTGSTWNLEKRLWEHQQGIGARHTAKRLPVKLLY 48
>UniRef50_Q0LXL6 Cluster: Excinuclease ABC, C subunit-like; n=3;
Alphaproteobacteria|Rep: Excinuclease ABC, C
subunit-like - Caulobacter sp. K31
Length = 157
Score = 33.5 bits (73), Expect = 5.3
Identities = 24/74 (32%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Frame = +1
Query: 187 LYTNKVWCVYILRQDN-GKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSASAY 363
L + VYI+ G LY G+TS+L R QH N + R LV+
Sbjct: 27 LMREHAYAVYIMSDSRRGVLYAGVTSDLQTRAHQHRNGEFGGFTREHGCKSLVWFETHD- 85
Query: 364 DYKTAARMEYNLKR 405
D + A R E +KR
Sbjct: 86 DIEAAIRREKLIKR 99
>UniRef50_Q9FHS4 Cluster: Emb|CAB76036.1; n=1; Arabidopsis
thaliana|Rep: Emb|CAB76036.1 - Arabidopsis thaliana
(Mouse-ear cress)
Length = 170
Score = 33.5 bits (73), Expect = 5.3
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 4/42 (9%)
Frame = +1
Query: 196 NKVWCVYILRQDNG--KLYTGITSNLNRRIKQHSN--KQGAK 309
+K W VY++ K Y GIT++ +RR+KQH+ + GAK
Sbjct: 51 SKSWSVYLILSTTEPIKTYVGITTDFSRRLKQHNGEIRGGAK 92
>UniRef50_Q14PT1 Cluster: Putative uncharacterized protein yazA;
n=1; Spiroplasma citri|Rep: Putative uncharacterized
protein yazA - Spiroplasma citri
Length = 99
Score = 33.1 bits (72), Expect = 7.0
Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Frame = +1
Query: 214 YILRQDNGKLYTGITSNLNRRIKQHSNKQGAK--CLRNATNLRLVYHSASAYDYKTAARM 387
Y+L + LY G T NLNRR ++H+ GAK L ++++Y + Y ++AA
Sbjct: 7 YVLFCADETLYAGYTVNLNRREQEHNMGAGAKYTSLAKRRPVKIIY--SEEYATRSAAMQ 64
Query: 388 EYNLKRKCSKYFKLRLI 438
++ S+ K+ +
Sbjct: 65 REAAFKQLSRLEKIMFL 81
>UniRef50_A2U060 Cluster: Putative uncharacterized protein; n=1;
Polaribacter dokdonensis MED152|Rep: Putative
uncharacterized protein - Polaribacter dokdonensis
MED152
Length = 80
Score = 33.1 bits (72), Expect = 7.0
Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 2/68 (2%)
Frame = +1
Query: 241 LYTGITSNLNRRIKQHSNK-QGAKCLRNATNLR-LVYHSASAYDYKTAARMEYNLKRKCS 414
+Y G+T++L RRI++HS + ++ N N + L+YH +TA + E LK K S
Sbjct: 1 MYIGVTNHLKRRIEEHSVPIESSRQFTNKYNCKYLIYHE-HYNSIETAIKREKQLK-KWS 58
Query: 415 KYFKLRLI 438
+ K LI
Sbjct: 59 RVKKETLI 66
>UniRef50_Q54HP2 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 915
Score = 33.1 bits (72), Expect = 7.0
Identities = 25/93 (26%), Positives = 43/93 (46%)
Frame = +3
Query: 168 YNHGDDSVHQQGVVRVHSAAGQWKIVHGHHEQP*QTHKTAFEQTRRQVFAQRNQFTARVS 347
+ H HQQ + A Q +H HH+Q Q H+ +Q ++Q Q+ Q +
Sbjct: 332 HQHQHQHQHQQQQHQ-QQAQQQQPHLHQHHQQQHQHHQYQ-QQQQQQQHQQQQQQQQQQQ 389
Query: 348 QRERVRLQNRRPHGIQS*A*MQQVFQIASHQSQ 446
Q+++ + Q ++ H Q QQ+ Q+ Q Q
Sbjct: 390 QQQQQQQQQQQQHQHQQ--QQQQLLQLQQQQQQ 420
>UniRef50_Q0UAL6 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 349
Score = 33.1 bits (72), Expect = 7.0
Identities = 19/38 (50%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Frame = +1
Query: 205 WCVYILRQDNGK-LYTGITSNLNRRIKQH--SNKQGAK 309
+C Y+LR N K Y G T N RR+ QH S+K GAK
Sbjct: 16 YCCYLLRSKNRKSYYIGSTPNPARRLGQHNGSSKGGAK 53
>UniRef50_A3HT36 Cluster: Putative uncharacterized protein; n=1;
Algoriphagus sp. PR1|Rep: Putative uncharacterized
protein - Algoriphagus sp. PR1
Length = 97
Score = 32.7 bits (71), Expect = 9.3
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Frame = +1
Query: 211 VYILRQD-NGKLYTGITSNLNRRIKQHSNKQGAKCLRNATNLRLVYHSASAYDYKTAARM 387
VYI+ + Y G T NL R+ QH+ ++ + YH+ + K A R+
Sbjct: 6 VYIIYSPLTDRFYIGQTQNLQERLDQHNTGYFKNAHTHSASDWEFYHTIACQSRKQAVRI 65
Query: 388 EYNLKR-KCSKY 420
E ++K+ K KY
Sbjct: 66 ESHIKKAKKRKY 77
>UniRef50_A7SFM6 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 163
Score = 32.7 bits (71), Expect = 9.3
Identities = 22/87 (25%), Positives = 34/87 (39%), Gaps = 1/87 (1%)
Frame = -3
Query: 394 CIPCGRRFCSRTRSR-CDTRAVNWLRCANTWRLVCSNAVLXXXXXXXXXXCTIFHCPAAE 218
C R+C+ + +R C W C N+ C+N++ C+
Sbjct: 9 CTDSLARWCTNSLARWCKNSLACW--CTNSLARWCTNSLARWCTSSLACWCSNSLACWYT 66
Query: 217 CTRTTPCWCTESSP*LYSASFRVWPSD 137
CT + CWCT+S L S W +D
Sbjct: 67 CTNSLACWCTDSLARLCKNSLARWCTD 93
>UniRef50_Q8EZM8 Cluster: 4-diphosphocytidyl-2-C-methyl-D-erythritol
kinase (EC 2.7.1.148) (CMK)
(4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol
kinase); n=4; Leptospira|Rep:
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC
2.7.1.148) (CMK)
(4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol
kinase) - Leptospira interrogans
Length = 297
Score = 32.7 bits (71), Expect = 9.3
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +3
Query: 486 VNMNLDVPYYRLGNHEKVEYIPLKLALNDDITSEP 590
+N+ L++P+ RL ++ + LK++ DDI EP
Sbjct: 7 INLGLEIPFKRLDGFHEIRSVFLKISWGDDIEIEP 41
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 636,482,011
Number of Sequences: 1657284
Number of extensions: 11814831
Number of successful extensions: 34308
Number of sequences better than 10.0: 126
Number of HSP's better than 10.0 without gapping: 32923
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34262
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 57851245060
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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