Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc28e11
(662 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P41672 Cluster: Uncharacterized 59.7 kDa protein in HE6... 103 3e-21
UniRef50_O10358 Cluster: Uncharacterized 59.0 kDa protein precur... 75 2e-12
UniRef50_O10359 Cluster: Uncharacterized 9.3 kDa protein; n=12; ... 71 3e-11
UniRef50_P41674 Cluster: Uncharacterized 6.7 kDa protein in HE65... 60 4e-08
UniRef50_Q0N3Y2 Cluster: PIF-1; n=2; Nucleopolyhedrovirus|Rep: P... 44 0.003
UniRef50_Q8V5Q2 Cluster: ORF114; n=4; Nucleopolyhedrovirus|Rep: ... 39 0.12
UniRef50_A4XJJ4 Cluster: Major facilitator superfamily MFS_1; n=... 35 2.0
UniRef50_UPI000150A866 Cluster: Tubulin-tyrosine ligase family p... 34 3.5
UniRef50_A1TXX1 Cluster: Histidine kinase internal region; n=3; ... 34 3.5
UniRef50_A1EWZ5 Cluster: Putative uncharacterized protein; n=2; ... 33 6.1
>UniRef50_P41672 Cluster: Uncharacterized 59.7 kDa protein in
HE65-PK2 intergenic region precursor; n=12;
Nucleopolyhedrovirus|Rep: Uncharacterized 59.7 kDa
protein in HE65-PK2 intergenic region precursor -
Autographa californica nuclear polyhedrosis virus
(AcMNPV)
Length = 530
Score = 103 bits (248), Expect = 3e-21
Identities = 48/70 (68%), Positives = 53/70 (75%)
Frame = +3
Query: 3 SREDTHIKIWSSASRYPRGDAPAVXXXXXXXXXXXXEQNTIRTITTGAMTQGQQIDALTQ 182
SRE THIK+WS ASRYPRGDAPA E+NTIR +TTG MTQGQQIDALTQ
Sbjct: 461 SREGTHIKVWSRASRYPRGDAPAALRLRGFFLNNDRERNTIRAVTTGDMTQGQQIDALTQ 520
Query: 183 ILQTYPNYSL 212
IL+TYPNYS+
Sbjct: 521 ILETYPNYSV 530
>UniRef50_O10358 Cluster: Uncharacterized 59.0 kDa protein
precursor; n=7; Nucleopolyhedrovirus|Rep:
Uncharacterized 59.0 kDa protein precursor - Orgyia
pseudotsugata multicapsid polyhedrosis virus (OpMNPV)
Length = 529
Score = 74.9 bits (176), Expect = 2e-12
Identities = 34/70 (48%), Positives = 42/70 (60%)
Frame = +3
Query: 3 SREDTHIKIWSSASRYPRGDAPAVXXXXXXXXXXXXEQNTIRTITTGAMTQGQQIDALTQ 182
SR+ IK+WS A RYPRG APA E+NT+R + TG M G Q DALTQ
Sbjct: 460 SRDGAAIKVWSRAERYPRGAAPAALRLRGFFFNNDRERNTVRVVNTGDMASGAQTDALTQ 519
Query: 183 ILQTYPNYSL 212
+L T+ NYS+
Sbjct: 520 VLDTFSNYSV 529
>UniRef50_O10359 Cluster: Uncharacterized 9.3 kDa protein; n=12;
Nucleopolyhedrovirus|Rep: Uncharacterized 9.3 kDa
protein - Orgyia pseudotsugata multicapsid polyhedrosis
virus (OpMNPV)
Length = 82
Score = 70.5 bits (165), Expect = 3e-11
Identities = 36/60 (60%), Positives = 41/60 (68%)
Frame = +1
Query: 223 MSILNVVEACDLAHTFLKLGYLFRAKTCLDIALDNLKLLRRKTNIKEVAVMLNKKLQNVC 402
MS+ VVEAC L F KLGYLFRA+ CLDIAL NLK LR++ I +VA ML KK C
Sbjct: 1 MSMAQVVEACKLHAVFAKLGYLFRARVCLDIALANLKQLRQRVAIPQVANMLAKKEAQCC 60
>UniRef50_P41674 Cluster: Uncharacterized 6.7 kDa protein in
HE65-PK2 intergenic region; n=3;
Nucleopolyhedrovirus|Rep: Uncharacterized 6.7 kDa
protein in HE65-PK2 intergenic region - Autographa
californica nuclear polyhedrosis virus (AcMNPV)
Length = 58
Score = 60.5 bits (140), Expect = 4e-08
Identities = 28/30 (93%), Positives = 29/30 (96%)
Frame = +3
Query: 573 MMSSSQIIVCNKINIFVYRYNLLQINFTLN 662
MMSSSQIIVCNKINIFV +YNLLQINFTLN
Sbjct: 1 MMSSSQIIVCNKINIFVCKYNLLQINFTLN 30
>UniRef50_Q0N3Y2 Cluster: PIF-1; n=2; Nucleopolyhedrovirus|Rep:
PIF-1 - Clanis bilineata nucleopolyhedrosis virus
Length = 538
Score = 44.0 bits (99), Expect = 0.003
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Frame = +3
Query: 3 SREDTHIKIWSSASRYPRGDAPAVXXXXXXXXXXXXE-QNTIRTITTGAMTQGQQIDALT 179
SR+ I+IWSS +RYPRG P V + + + TITTG + +D L
Sbjct: 468 SRQGWAIRIWSSPTRYPRGQFPMVFNFDIKFVYEMPDIRFSFMTITTG-VNVTDDVDNLV 526
Query: 180 QILQTYPNYSL 212
++ TY NY++
Sbjct: 527 VLMTTYKNYTV 537
>UniRef50_Q8V5Q2 Cluster: ORF114; n=4; Nucleopolyhedrovirus|Rep:
ORF114 - Helicoverpa zea SNPV
Length = 528
Score = 38.7 bits (86), Expect = 0.12
Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 3/72 (4%)
Frame = +3
Query: 3 SREDTHIKIWSSASRYPRGDAPAVXXXXXXXXXXXXEQNT---IRTITTGAMTQGQQIDA 173
SRE+ HI+ W + +P G P+V N+ + I+ ++ Q D
Sbjct: 454 SRENNHIRSWHPSRIFPDGRYPSVFRIALNQMYNVRNTNSTCELFVISGHSIVLRDQFDN 513
Query: 174 LTQILQTYPNYS 209
L IL TYPNYS
Sbjct: 514 LRSILGTYPNYS 525
>UniRef50_A4XJJ4 Cluster: Major facilitator superfamily MFS_1; n=1;
Caldicellulosiruptor saccharolyticus DSM 8903|Rep: Major
facilitator superfamily MFS_1 - Caldicellulosiruptor
saccharolyticus (strain ATCC 43494 / DSM 8903)
Length = 394
Score = 34.7 bits (76), Expect = 2.0
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Frame = -1
Query: 575 HISNLFYTYNSAGKTSLKYDVIYFCTQNIELVMISSFD-SVNFY*NTLCNFFIYFLFQL- 402
H+SNL + + G + I F T+ + V+ + + L NF +FLF L
Sbjct: 25 HMSNLKVSLFAIGILGSVLETIRFVTEIPFGAFADRYGRKVSLFLSALLNFIAFFLFSLG 84
Query: 401 QTFCSFLFSM 372
TFC FLFS+
Sbjct: 85 NTFCMFLFSV 94
>UniRef50_UPI000150A866 Cluster: Tubulin-tyrosine ligase family
protein; n=1; Tetrahymena thermophila SB210|Rep:
Tubulin-tyrosine ligase family protein - Tetrahymena
thermophila SB210
Length = 728
Score = 33.9 bits (74), Expect = 3.5
Identities = 18/54 (33%), Positives = 32/54 (59%)
Frame = -1
Query: 554 TYNSAGKTSLKYDVIYFCTQNIELVMISSFDSVNFY*NTLCNFFIYFLFQLQTF 393
TYNS K +L++D+ ++ E+V S ++NFY N L N +++ + Q+F
Sbjct: 5 TYNSPQKQNLRHDMSLPQQKHQEVVYNESKTNINFYQNQLANGYMFQPNRYQSF 58
>UniRef50_A1TXX1 Cluster: Histidine kinase internal region; n=3;
Marinobacter|Rep: Histidine kinase internal region -
Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 /
VT8)(Marinobacter hydrocarbonoclasticus (strain DSM
11845))
Length = 372
Score = 33.9 bits (74), Expect = 3.5
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Frame = -3
Query: 222 VVIIKSSWGKFEVFGLMRLFVALGSW-RL**SFLLCFVRD--GRPEKSRAILTLQARLRV 52
+V ++SW + FGL+ LFV W L + L+C +R R SRA +T+ A + +
Sbjct: 56 IVQAQNSWIDWNYFGLLSLFV---QWTTLTSAALICLLRPRLARMSNSRATMTIAAIVLL 112
Query: 51 DIVTRYSKFLYAYLH 7
D++ +S F + LH
Sbjct: 113 DVLA-FSLFADSVLH 126
>UniRef50_A1EWZ5 Cluster: Putative uncharacterized protein; n=2;
Coxiella burnetii|Rep: Putative uncharacterized protein
- Coxiella burnetii 'MSU Goat Q177'
Length = 390
Score = 33.1 bits (72), Expect = 6.1
Identities = 33/107 (30%), Positives = 47/107 (43%), Gaps = 5/107 (4%)
Frame = -3
Query: 651 NLFVINYIYTQICLFYYILLFVMMTSYL----KLVLHVQF-CW*NKFKI*CHLFLHTKY* 487
+LFV N IYT + L+F + SYL + LH+ F N C L ++ Y
Sbjct: 236 SLFVWNKIYTYCIIGINSLIFFIFVSYLLSDRAMYLHISFLVTLNAIMFFCALLIYKLYE 295
Query: 486 TRYDFII**CKFLLKYVVQFFYLFFVSIANIL*FFV*HDCHFLYVSF 346
TR + + F L Y FYLF +S ++ HFL + F
Sbjct: 296 TRLSYGL---YFNLFYNKAQFYLFDLSSIFLIVLL-----HFLIIGF 334
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 611,074,043
Number of Sequences: 1657284
Number of extensions: 11508646
Number of successful extensions: 27272
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 26042
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27213
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 50413227838
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -